RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 EFCAB2Q5VUJ9 269 aa35.15■■■■□ 3.22
SMARCD2-206ENST00000577990 ARHGAP5Q13017 1502 aa35.15■■■■□ 3.22
SMARCD2-206ENST00000577990 TIAM1Q13009 1591 aa35.14■■■■□ 3.22
SMARCD2-206ENST00000577990 PREX2Q70Z35 1606 aa35.14■■■■□ 3.22
SMARCD2-206ENST00000577990 ARHGEF40Q8TER5 1519 aa35.12■■■■□ 3.21
SMARCD2-206ENST00000577990 CDC42BPBQ9Y5S2 1711 aa35.12■■■■□ 3.21
SMARCD2-206ENST00000577990 CDC42BPAQ5VT25 1732 aa35.1■■■■□ 3.21
SMARCD2-206ENST00000577990 ZMYM4Q5VZL5 1548 aa35.06■■■■□ 3.2
SMARCD2-206ENST00000577990 ADAMTSL3P82987 1691 aa35.05■■■■□ 3.2
SMARCD2-206ENST00000577990 MAP3K1Q13233 1512 aa35.04■■■■□ 3.2
SMARCD2-206ENST00000577990 SCAPERQ9BY12 1400 aa35.04■■■■□ 3.2
SMARCD2-206ENST00000577990 BCORL1Q5H9F3 1711 aa35.03■■■■□ 3.2
SMARCD2-206ENST00000577990 GPATCH8Q9UKJ3 1502 aaKnown RBP35.02■■■■□ 3.2
SMARCD2-206ENST00000577990 CCNB3Q8WWL7 1395 aa35■■■■□ 3.19
SMARCD2-206ENST00000577990 POGZQ7Z3K3 1410 aa34.99■■■■□ 3.19
SMARCD2-206ENST00000577990 ZFYVE16Q7Z3T8 1539 aa34.99■■■■□ 3.19
SMARCD2-206ENST00000577990 ARID4BQ4LE39 1312 aaPredicted RBP34.99■■■■□ 3.19
SMARCD2-206ENST00000577990 HECW2Q9P2P5 1572 aa34.99■■■■□ 3.19
SMARCD2-206ENST00000577990 LRRC9Q6ZRR7 1453 aa34.98■■■■□ 3.19
SMARCD2-206ENST00000577990 SUPT6HQ7KZ85 1726 aaKnown RBP34.98■■■■□ 3.19
SMARCD2-206ENST00000577990 YEATS2Q9ULM3 1422 aa34.98■■■■□ 3.19
SMARCD2-206ENST00000577990 SIGLEC1Q9BZZ2 1709 aa34.97■■■■□ 3.19
SMARCD2-206ENST00000577990 MADDQ8WXG6 1647 aa34.95■■■■□ 3.18
SMARCD2-206ENST00000577990 ABCC1P33527 1531 aa34.93■■■■□ 3.18
SMARCD2-206ENST00000577990 NCOA2Q15596 1464 aa34.93■■■■□ 3.18
SMARCD2-206ENST00000577990 ITSN2Q9NZM3 1697 aa34.91■■■■□ 3.18
SMARCD2-206ENST00000577990 APLP2Q06481 763 aa34.9■■■■□ 3.18
SMARCD2-206ENST00000577990 MAGI2Q86UL8 1455 aa34.9■■■■□ 3.18
SMARCD2-206ENST00000577990 CFDP1Q9UEE9 299 aaPredicted RBP34.89■■■■□ 3.18
SMARCD2-206ENST00000577990 PTPRMP28827 1452 aa34.89■■■■□ 3.18
SMARCD2-206ENST00000577990 ZNF518AQ6AHZ1 1483 aa34.89■■■■□ 3.18
SMARCD2-206ENST00000577990 SAMD9LQ8IVG5 1584 aa34.88■■■■□ 3.17
SMARCD2-206ENST00000577990 KANK4Q5T7N3 995 aaPredicted RBP34.88■■■■□ 3.17
SMARCD2-206ENST00000577990 ZNF777Q9ULD5 760 aaPredicted RBP34.87■■■■□ 3.17
SMARCD2-206ENST00000577990 ARHGEF12Q9NZN5 1544 aa34.86■■■■□ 3.17
SMARCD2-206ENST00000577990 RIMS1Q86UR5 1692 aaKnown RBP34.86■■■■□ 3.17
SMARCD2-206ENST00000577990 KDM5CP41229 1560 aa34.83■■■■□ 3.17
SMARCD2-206ENST00000577990 PLEKHH2Q8IVE3 1493 aa34.81■■■■□ 3.16
SMARCD2-206ENST00000577990 TRAPPC8Q9Y2L5 1435 aa34.81■■■■□ 3.16
SMARCD2-206ENST00000577990 AFAP1Q8N556 730 aa34.8■■■■□ 3.16
SMARCD2-206ENST00000577990 SYCP2Q9BX26 1530 aa34.8■■■■□ 3.16
SMARCD2-206ENST00000577990 KIAA1107Q9UPP5 1409 aa34.78■■■■□ 3.16
SMARCD2-206ENST00000577990 ATP10AO60312 1499 aa34.74■■■■□ 3.15
SMARCD2-206ENST00000577990 FER1L4A9Z1Z3 1794 aa34.72■■■■□ 3.15
SMARCD2-206ENST00000577990 C9orf84Q5VXU9 1444 aa34.72■■■■□ 3.15
SMARCD2-206ENST00000577990 HNRNPMP52272 730 aaKnown RBP eCLIP34.71■■■■□ 3.15
SMARCD2-206ENST00000577990 MLECQ14165 292 aa34.71■■■■□ 3.15
SMARCD2-206ENST00000577990 MLH3Q9UHC1 1453 aa34.71■■■■□ 3.15
SMARCD2-206ENST00000577990 ZNF644Q9H582 1327 aaPredicted RBP34.7■■■■□ 3.15
SMARCD2-206ENST00000577990 DIP2CQ9Y2E4 1556 aa34.69■■■■□ 3.14
SMARCD2-206ENST00000577990 ABCA6Q8N139 1617 aa34.68■■■■□ 3.14
SMARCD2-206ENST00000577990 MYT1LQ9UL68 1186 aa34.67■■■■□ 3.14
SMARCD2-206ENST00000577990 CAMSAP2Q08AD1 1489 aa34.65■■■■□ 3.14
SMARCD2-206ENST00000577990 MYOM3Q5VTT5 1437 aa34.64■■■■□ 3.14
SMARCD2-206ENST00000577990 PLPPR3Q6T4P5 718 aa34.63■■■■□ 3.13
SMARCD2-206ENST00000577990 MBD5Q9P267 1494 aa34.62■■■■□ 3.13
SMARCD2-206ENST00000577990 KIDINS220Q9ULH0 1771 aa34.62■■■■□ 3.13
SMARCD2-206ENST00000577990 SPAG9O60271 1321 aaKnown RBP34.59■■■■□ 3.13
SMARCD2-206ENST00000577990 MIA2Q96PC5 1412 aa34.59■■■■□ 3.13
SMARCD2-206ENST00000577990 REREQ9P2R6 1566 aa34.55■■■■□ 3.12
SMARCD2-206ENST00000577990 INO80Q9ULG1 1556 aaPredicted RBP34.55■■■■□ 3.12
SMARCD2-206ENST00000577990 ATP7AQ04656 1500 aa34.55■■■■□ 3.12
SMARCD2-206ENST00000577990 LMTK3Q96Q04 1460 aa34.54■■■■□ 3.12
SMARCD2-206ENST00000577990 CCDC141Q6ZP82 1450 aa34.53■■■■□ 3.12
SMARCD2-206ENST00000577990 ARHGEF5Q12774 1597 aa34.51■■■■□ 3.12
SMARCD2-206ENST00000577990 RSPH4AQ5TD94 716 aa34.49■■■■□ 3.11
SMARCD2-206ENST00000577990 RTEL1-TNFRSF6BF6WH68 1400 aa34.45■■■■□ 3.11
SMARCD2-206ENST00000577990 FGD6Q6ZV73 1430 aa34.45■■■■□ 3.11
SMARCD2-206ENST00000577990 PTPN23Q9H3S7 1636 aa34.44■■■■□ 3.1
SMARCD2-206ENST00000577990 AGLP35573 1532 aa34.42■■■■□ 3.1
SMARCD2-206ENST00000577990 CEBPAP49715 358 aaPredicted RBP34.38■■■■□ 3.09
SMARCD2-206ENST00000577990 ADGBQ8N7X0 1667 aa34.38■■■■□ 3.09
SMARCD2-206ENST00000577990 TCOF1Q13428 1488 aaKnown RBP34.37■■■■□ 3.09
SMARCD2-206ENST00000577990 A2MP01023 1474 aa34.36■■■■□ 3.09
SMARCD2-206ENST00000577990 TSPY4P0CV99 314 aa34.36■■■■□ 3.09
SMARCD2-206ENST00000577990 TSPY10P0CW01 314 aa34.36■■■■□ 3.09
SMARCD2-206ENST00000577990 HSPA2P54652 639 aa34.36■■■■□ 3.09
SMARCD2-206ENST00000577990 PLXNC1O60486 1568 aa34.35■■■■□ 3.09
SMARCD2-206ENST00000577990 PREX1Q8TCU6 1659 aa34.34■■■■□ 3.09
SMARCD2-206ENST00000577990 C3P01024 1663 aa34.33■■■■□ 3.09
SMARCD2-206ENST00000577990 MAST1Q9Y2H9 1570 aa34.32■■■■□ 3.09
SMARCD2-206ENST00000577990 ILDR1Q86SU0 546 aaPredicted RBP34.28■■■■□ 3.08
SMARCD2-206ENST00000577990 PPARGC1BQ86YN6 1023 aaKnown RBP34.28■■■■□ 3.08
SMARCD2-206ENST00000577990 CROCC2H7BZ55 1655 aa34.26■■■■□ 3.08
SMARCD2-206ENST00000577990 ABCC5O15440 1437 aa34.26■■■■□ 3.07
SMARCD2-206ENST00000577990 DNMT1P26358 1616 aaKnown RBP34.26■■■■□ 3.07
SMARCD2-206ENST00000577990 DHX29Q7Z478 1369 aaKnown RBP34.24■■■■□ 3.07
SMARCD2-206ENST00000577990 SHANK2Q9UPX8 1470 aa34.24■■■■□ 3.07
SMARCD2-206ENST00000577990 DAPK1P53355 1430 aa34.23■■■■□ 3.07
SMARCD2-206ENST00000577990 ESF1Q9H501 851 aaKnown RBP34.23■■■■□ 3.07
SMARCD2-206ENST00000577990 SETD1BQ9UPS6 1966 aaKnown RBP34.22■■■■□ 3.07
SMARCD2-206ENST00000577990 FAM50AQ14320 339 aaKnown RBP34.19■■■■□ 3.06
SMARCD2-206ENST00000577990 MROH2AA6NES4 1674 aa34.16■■■■□ 3.06
SMARCD2-206ENST00000577990 CLTCQ00610 1675 aaKnown RBP34.16■■■■□ 3.06
SMARCD2-206ENST00000577990 CNTLNQ9NXG0 1405 aa34.15■■■■□ 3.06
SMARCD2-206ENST00000577990 UHRF1BP1Q6BDS2 1440 aa34.13■■■■□ 3.05
SMARCD2-206ENST00000577990 GGT6Q6P531 493 aa34.1■■■■□ 3.05
SMARCD2-206ENST00000577990 KIF3BO15066 747 aa34.08■■■■□ 3.05
SMARCD2-206ENST00000577990 DUOX2Q9NRD8 1548 aa34.08■■■■□ 3.05
SMARCD2-206ENST00000577990 KIF15Q9NS87 1388 aa34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms