RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 SIGLEC1Q9BZZ2 1709 aa20.59■□□□□ 0.89
SSH2-205ENST00000577483 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
SSH2-205ENST00000577483 ADAMTSL3P82987 1691 aa20.57■□□□□ 0.88
SSH2-205ENST00000577483 CEP162Q5TB80 1403 aa20.56■□□□□ 0.88
SSH2-205ENST00000577483 ARHGAP5Q13017 1502 aa20.56■□□□□ 0.88
SSH2-205ENST00000577483 POGZQ7Z3K3 1410 aa20.54■□□□□ 0.88
SSH2-205ENST00000577483 ZFYVE16Q7Z3T8 1539 aa20.53■□□□□ 0.88
SSH2-205ENST00000577483 ITSN2Q9NZM3 1697 aa20.52■□□□□ 0.88
SSH2-205ENST00000577483 SCAPERQ9BY12 1400 aa20.52■□□□□ 0.88
SSH2-205ENST00000577483 MADDQ8WXG6 1647 aa20.5■□□□□ 0.87
SSH2-205ENST00000577483 YEATS2Q9ULM3 1422 aa20.5■□□□□ 0.87
SSH2-205ENST00000577483 KDM5CP41229 1560 aa20.49■□□□□ 0.87
SSH2-205ENST00000577483 ABCC1P33527 1531 aa20.48■□□□□ 0.87
SSH2-205ENST00000577483 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
SSH2-205ENST00000577483 EFCAB2Q5VUJ9 269 aa20.47■□□□□ 0.87
SSH2-205ENST00000577483 HECW2Q9P2P5 1572 aa20.45■□□□□ 0.86
SSH2-205ENST00000577483 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
SSH2-205ENST00000577483 ZNF518AQ6AHZ1 1483 aa20.44■□□□□ 0.86
SSH2-205ENST00000577483 SAMD9LQ8IVG5 1584 aa20.44■□□□□ 0.86
SSH2-205ENST00000577483 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
SSH2-205ENST00000577483 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
SSH2-205ENST00000577483 EHBP1L1Q8N3D4 1523 aa20.41■□□□□ 0.86
SSH2-205ENST00000577483 ABCA6Q8N139 1617 aa20.41■□□□□ 0.86
SSH2-205ENST00000577483 FER1L4A9Z1Z3 1794 aa20.41■□□□□ 0.86
SSH2-205ENST00000577483 DIP2CQ9Y2E4 1556 aa20.4■□□□□ 0.86
SSH2-205ENST00000577483 GPATCH8Q9UKJ3 1502 aaKnown RBP20.4■□□□□ 0.86
SSH2-205ENST00000577483 PTPRMP28827 1452 aa20.4■□□□□ 0.86
SSH2-205ENST00000577483 TIAM1Q13009 1591 aa20.39■□□□□ 0.85
SSH2-205ENST00000577483 KIDINS220Q9ULH0 1771 aa20.39■□□□□ 0.85
SSH2-205ENST00000577483 ARID4BQ4LE39 1312 aaPredicted RBP20.38■□□□□ 0.85
SSH2-205ENST00000577483 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
SSH2-205ENST00000577483 TRAPPC8Q9Y2L5 1435 aa20.37■□□□□ 0.85
SSH2-205ENST00000577483 MTUS2Q5JR59 1369 aa20.36■□□□□ 0.85
SSH2-205ENST00000577483 AFAP1Q8N556 730 aa20.36■□□□□ 0.85
SSH2-205ENST00000577483 ATP10AO60312 1499 aa20.36■□□□□ 0.85
SSH2-205ENST00000577483 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
SSH2-205ENST00000577483 SUPT6HQ7KZ85 1726 aaKnown RBP20.34■□□□□ 0.85
SSH2-205ENST00000577483 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
SSH2-205ENST00000577483 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
SSH2-205ENST00000577483 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.85
SSH2-205ENST00000577483 CCNB3Q8WWL7 1395 aa20.3■□□□□ 0.84
SSH2-205ENST00000577483 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
SSH2-205ENST00000577483 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
SSH2-205ENST00000577483 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
SSH2-205ENST00000577483 PLEKHH2Q8IVE3 1493 aa20.25■□□□□ 0.83
SSH2-205ENST00000577483 ATP7AQ04656 1500 aa20.24■□□□□ 0.83
SSH2-205ENST00000577483 MLECQ14165 292 aa20.24■□□□□ 0.83
SSH2-205ENST00000577483 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
SSH2-205ENST00000577483 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
SSH2-205ENST00000577483 MYT1LQ9UL68 1186 aa20.23■□□□□ 0.83
SSH2-205ENST00000577483 AGLP35573 1532 aa20.22■□□□□ 0.83
SSH2-205ENST00000577483 LRRC9Q6ZRR7 1453 aa20.22■□□□□ 0.83
SSH2-205ENST00000577483 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSH2-205ENST00000577483 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.83
SSH2-205ENST00000577483 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
SSH2-205ENST00000577483 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
SSH2-205ENST00000577483 C3P01024 1663 aa20.19■□□□□ 0.82
SSH2-205ENST00000577483 PLXNC1O60486 1568 aa20.19■□□□□ 0.82
SSH2-205ENST00000577483 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
SSH2-205ENST00000577483 MBD5Q9P267 1494 aa20.18■□□□□ 0.82
SSH2-205ENST00000577483 CAMSAP2Q08AD1 1489 aa20.17■□□□□ 0.82
SSH2-205ENST00000577483 PREX1Q8TCU6 1659 aa20.17■□□□□ 0.82
SSH2-205ENST00000577483 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
SSH2-205ENST00000577483 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
SSH2-205ENST00000577483 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
SSH2-205ENST00000577483 KANK4Q5T7N3 995 aaPredicted RBP20.11■□□□□ 0.81
SSH2-205ENST00000577483 ARHGEF5Q12774 1597 aa20.11■□□□□ 0.81
SSH2-205ENST00000577483 CLTCQ00610 1675 aaKnown RBP20.1■□□□□ 0.81
SSH2-205ENST00000577483 A2MP01023 1474 aa20.1■□□□□ 0.81
SSH2-205ENST00000577483 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
SSH2-205ENST00000577483 SETD1BQ9UPS6 1966 aaKnown RBP20.07■□□□□ 0.8
SSH2-205ENST00000577483 CEBPAP49715 358 aaPredicted RBP20.06■□□□□ 0.8
SSH2-205ENST00000577483 RTEL1-TNFRSF6BF6WH68 1400 aa20.06■□□□□ 0.8
SSH2-205ENST00000577483 CROCC2H7BZ55 1655 aa20.04■□□□□ 0.8
SSH2-205ENST00000577483 MYOM3Q5VTT5 1437 aa20.04■□□□□ 0.8
SSH2-205ENST00000577483 MAST1Q9Y2H9 1570 aa20.02■□□□□ 0.8
SSH2-205ENST00000577483 CNTLNQ9NXG0 1405 aa20.01■□□□□ 0.79
SSH2-205ENST00000577483 HSPA2P54652 639 aa20.01■□□□□ 0.79
SSH2-205ENST00000577483 PTPN23Q9H3S7 1636 aa20■□□□□ 0.79
SSH2-205ENST00000577483 MIA2Q96PC5 1412 aa20■□□□□ 0.79
SSH2-205ENST00000577483 STRCQ7RTU9 1775 aa20■□□□□ 0.79
SSH2-205ENST00000577483 ESF1Q9H501 851 aaKnown RBP19.96■□□□□ 0.79
SSH2-205ENST00000577483 DHX29Q7Z478 1369 aaKnown RBP19.96■□□□□ 0.79
SSH2-205ENST00000577483 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
SSH2-205ENST00000577483 UHRF1BP1Q6BDS2 1440 aa19.95■□□□□ 0.78
SSH2-205ENST00000577483 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
SSH2-205ENST00000577483 ZNF142P52746 1687 aaPredicted RBP19.94■□□□□ 0.78
SSH2-205ENST00000577483 APLP2Q06481 763 aa19.93■□□□□ 0.78
SSH2-205ENST00000577483 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
SSH2-205ENST00000577483 ZMYM3Q14202 1370 aa19.93■□□□□ 0.78
SSH2-205ENST00000577483 RNF17Q9BXT8 1623 aaKnown RBP19.93■□□□□ 0.78
SSH2-205ENST00000577483 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
SSH2-205ENST00000577483 GGT6Q6P531 493 aa19.92■□□□□ 0.78
SSH2-205ENST00000577483 NPATQ14207 1427 aa19.9■□□□□ 0.78
SSH2-205ENST00000577483 KDM5DQ9BY66 1539 aa19.9■□□□□ 0.78
SSH2-205ENST00000577483 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
SSH2-205ENST00000577483 TCOF1Q13428 1488 aaKnown RBP19.89■□□□□ 0.77
SSH2-205ENST00000577483 MROH1Q8NDA8 1641 aa19.88■□□□□ 0.77
SSH2-205ENST00000577483 FAM135AQ9P2D6 1515 aa19.88■□□□□ 0.77
SSH2-205ENST00000577483 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms