RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-233	ENST00000575934	POGZ	Q7Z3K3	1410 aa		33.35	■■■□□ 2.93
ABR-233	ENST00000575934	SCAPER	Q9BY12	1400 aa		33.34	■■■□□ 2.93
ABR-233	ENST00000575934	MAGI2	Q86UL8	1455 aa		33.33	■■■□□ 2.93
ABR-233	ENST00000575934	MADD	Q8WXG6	1647 aa		33.31	■■■□□ 2.92
ABR-233	ENST00000575934	PTPRM	P28827	1452 aa		33.31	■■■□□ 2.92
ABR-233	ENST00000575934	EFCAB2	Q5VUJ9	269 aa		33.3	■■■□□ 2.92
ABR-233	ENST00000575934	SIGLEC1	Q9BZZ2	1709 aa		33.3	■■■□□ 2.92
ABR-233	ENST00000575934	FYCO1	Q9BQS8	1478 aa		33.3	■■■□□ 2.92
ABR-233	ENST00000575934	YEATS2	Q9ULM3	1422 aa		33.29	■■■□□ 2.92
ABR-233	ENST00000575934	CDC42BPB	Q9Y5S2	1711 aa		33.29	■■■□□ 2.92
ABR-233	ENST00000575934	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.28	■■■□□ 2.92
ABR-233	ENST00000575934	ARHGAP5	Q13017	1502 aa		33.27	■■■□□ 2.92
ABR-233	ENST00000575934	PREX2	Q70Z35	1606 aa		33.24	■■■□□ 2.91
ABR-233	ENST00000575934	RIMS1	Q86UR5	1692 aa	Known RBP	33.21	■■■□□ 2.91
ABR-233	ENST00000575934	KDM5C	P41229	1560 aa		33.19	■■■□□ 2.9
ABR-233	ENST00000575934	CDC42BPA	Q5VT25	1732 aa		33.18	■■■□□ 2.9
ABR-233	ENST00000575934	ZNF518A	Q6AHZ1	1483 aa		33.18	■■■□□ 2.9
ABR-233	ENST00000575934	ATP10A	O60312	1499 aa		33.12	■■■□□ 2.89
ABR-233	ENST00000575934	ABCC1	P33527	1531 aa		33.12	■■■□□ 2.89
ABR-233	ENST00000575934	FER1L4	A9Z1Z3	1794 aa		33.11	■■■□□ 2.89
ABR-233	ENST00000575934	C9orf84	Q5VXU9	1444 aa		33.11	■■■□□ 2.89
ABR-233	ENST00000575934	ITSN2	Q9NZM3	1697 aa		33.1	■■■□□ 2.89
ABR-233	ENST00000575934	AFAP1	Q8N556	730 aa		33.06	■■■□□ 2.88
ABR-233	ENST00000575934	ARHGEF12	Q9NZN5	1544 aa		33.05	■■■□□ 2.88
ABR-233	ENST00000575934	DIP2C	Q9Y2E4	1556 aa		33.04	■■■□□ 2.88
ABR-233	ENST00000575934	MLH3	Q9UHC1	1453 aa		33.01	■■■□□ 2.88
ABR-233	ENST00000575934	ABCA6	Q8N139	1617 aa		33.01	■■■□□ 2.87
ABR-233	ENST00000575934	RERE	Q9P2R6	1566 aa		33	■■■□□ 2.87
ABR-233	ENST00000575934	TRAPPC8	Q9Y2L5	1435 aa		33	■■■□□ 2.87
ABR-233	ENST00000575934	LMTK3	Q96Q04	1460 aa		32.99	■■■□□ 2.87
ABR-233	ENST00000575934	MLEC	Q14165	292 aa		32.98	■■■□□ 2.87
ABR-233	ENST00000575934	CEP162	Q5TB80	1403 aa		32.98	■■■□□ 2.87
ABR-233	ENST00000575934	SAMD9L	Q8IVG5	1584 aa		32.97	■■■□□ 2.87
ABR-233	ENST00000575934	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.97	■■■□□ 2.87
ABR-233	ENST00000575934	KIDINS220	Q9ULH0	1771 aa		32.95	■■■□□ 2.87
ABR-233	ENST00000575934	MYT1L	Q9UL68	1186 aa		32.9	■■■□□ 2.86
ABR-233	ENST00000575934	SYCP2	Q9BX26	1530 aa		32.9	■■■□□ 2.86
ABR-233	ENST00000575934	MTUS2	Q5JR59	1369 aa		32.89	■■■□□ 2.86
ABR-233	ENST00000575934	AGL	P35573	1532 aa		32.87	■■■□□ 2.85
ABR-233	ENST00000575934	EHBP1L1	Q8N3D4	1523 aa		32.87	■■■□□ 2.85
ABR-233	ENST00000575934	PLPPR3	Q6T4P5	718 aa		32.84	■■■□□ 2.85
ABR-233	ENST00000575934	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.84	■■■□□ 2.85
ABR-233	ENST00000575934	CCNB3	Q8WWL7	1395 aa		32.83	■■■□□ 2.85
ABR-233	ENST00000575934	TIAM1	Q13009	1591 aa		32.83	■■■□□ 2.85
ABR-233	ENST00000575934	KIAA1107	Q9UPP5	1409 aa		32.82	■■■□□ 2.84
ABR-233	ENST00000575934	PLEKHH2	Q8IVE3	1493 aa		32.81	■■■□□ 2.84
ABR-233	ENST00000575934	ILDR1	Q86SU0	546 aa	Predicted RBP	32.81	■■■□□ 2.84
ABR-233	ENST00000575934	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.79	■■■□□ 2.84
ABR-233	ENST00000575934	PREX1	Q8TCU6	1659 aa		32.78	■■■□□ 2.84
ABR-233	ENST00000575934	INO80	Q9ULG1	1556 aa	Predicted RBP	32.76	■■■□□ 2.84
ABR-233	ENST00000575934	SETD1B	Q9UPS6	1966 aa	Known RBP	32.76	■■■□□ 2.83
ABR-233	ENST00000575934	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.75	■■■□□ 2.83
ABR-233	ENST00000575934	ATP7A	Q04656	1500 aa		32.74	■■■□□ 2.83
ABR-233	ENST00000575934	C3	P01024	1663 aa		32.72	■■■□□ 2.83
ABR-233	ENST00000575934	SPAG9	O60271	1321 aa	Known RBP	32.72	■■■□□ 2.83
ABR-233	ENST00000575934	HSPA2	P54652	639 aa		32.71	■■■□□ 2.83
ABR-233	ENST00000575934	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.71	■■■□□ 2.83
ABR-233	ENST00000575934	CEBPA	P49715	358 aa	Predicted RBP	32.7	■■■□□ 2.83
ABR-233	ENST00000575934	PLXNC1	O60486	1568 aa		32.66	■■■□□ 2.82
ABR-233	ENST00000575934	LOC105371045	A0A1W2PR82	267 aa		32.66	■■■□□ 2.82
ABR-233	ENST00000575934	VPS8	Q8N3P4	1428 aa		32.65	■■■□□ 2.82
ABR-233	ENST00000575934	NCOA2	Q15596	1464 aa		32.64	■■■□□ 2.82
ABR-233	ENST00000575934	MBD5	Q9P267	1494 aa		32.64	■■■□□ 2.82
ABR-233	ENST00000575934	ADGB	Q8N7X0	1667 aa		32.62	■■■□□ 2.81
ABR-233	ENST00000575934	ZNF644	Q9H582	1327 aa	Predicted RBP	32.62	■■■□□ 2.81
ABR-233	ENST00000575934	MROH2A	A6NES4	1674 aa		32.62	■■■□□ 2.81
ABR-233	ENST00000575934	CNTLN	Q9NXG0	1405 aa		32.61	■■■□□ 2.81
ABR-233	ENST00000575934	A2M	P01023	1474 aa		32.6	■■■□□ 2.81
ABR-233	ENST00000575934	ESF1	Q9H501	851 aa	Known RBP	32.58	■■■□□ 2.81
ABR-233	ENST00000575934	UHRF1BP1	Q6BDS2	1440 aa		32.58	■■■□□ 2.81
ABR-233	ENST00000575934	CAMSAP2	Q08AD1	1489 aa		32.53	■■■□□ 2.8
ABR-233	ENST00000575934	LRRC9	Q6ZRR7	1453 aa		32.53	■■■□□ 2.8
ABR-233	ENST00000575934	STRC	Q7RTU9	1775 aa		32.53	■■■□□ 2.8
ABR-233	ENST00000575934	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.52	■■■□□ 2.8
ABR-233	ENST00000575934	CLTC	Q00610	1675 aa	Known RBP	32.51	■■■□□ 2.79
ABR-233	ENST00000575934	MAP3K1	Q13233	1512 aa		32.5	■■■□□ 2.79
ABR-233	ENST00000575934	CCDC141	Q6ZP82	1450 aa		32.49	■■■□□ 2.79
ABR-233	ENST00000575934	FBXO41	Q8TF61	875 aa		32.46	■■■□□ 2.79
ABR-233	ENST00000575934	ARHGEF5	Q12774	1597 aa		32.45	■■■□□ 2.78
ABR-233	ENST00000575934	NPAT	Q14207	1427 aa		32.44	■■■□□ 2.78
ABR-233	ENST00000575934	ZMYM3	Q14202	1370 aa		32.44	■■■□□ 2.78
ABR-233	ENST00000575934	RSPH4A	Q5TD94	716 aa		32.41	■■■□□ 2.78
ABR-233	ENST00000575934	DHX29	Q7Z478	1369 aa	Known RBP	32.39	■■■□□ 2.78
ABR-233	ENST00000575934	GGT6	Q6P531	493 aa		32.37	■■■□□ 2.77
ABR-233	ENST00000575934	PPP6R1	Q9UPN7	881 aa		32.36	■■■□□ 2.77
ABR-233	ENST00000575934	KANK4	Q5T7N3	995 aa	Predicted RBP	32.35	■■■□□ 2.77
ABR-233	ENST00000575934	ZNF142	P52746	1687 aa	Predicted RBP	32.34	■■■□□ 2.77
ABR-233	ENST00000575934	MYO3A	Q8NEV4	1616 aa		32.33	■■■□□ 2.77
ABR-233	ENST00000575934	DMRT2	Q9Y5R5	561 aa		32.32	■■■□□ 2.76
ABR-233	ENST00000575934	PTPRK	Q15262	1439 aa		32.32	■■■□□ 2.76
ABR-233	ENST00000575934	MAST1	Q9Y2H9	1570 aa		32.3	■■■□□ 2.76
ABR-233	ENST00000575934	MYOM3	Q5VTT5	1437 aa		32.29	■■■□□ 2.76
ABR-233	ENST00000575934	NCOA1	Q15788	1441 aa		32.28	■■■□□ 2.76
ABR-233	ENST00000575934	MIA2	Q96PC5	1412 aa		32.28	■■■□□ 2.76
ABR-233	ENST00000575934	FAM135A	Q9P2D6	1515 aa		32.28	■■■□□ 2.76
ABR-233	ENST00000575934	PTPRT	O14522	1441 aa		32.27	■■■□□ 2.76
ABR-233	ENST00000575934	CAMSAP1	Q5T5Y3	1602 aa		32.26	■■■□□ 2.75
ABR-233	ENST00000575934	TSPY4	P0CV99	314 aa		32.25	■■■□□ 2.75
ABR-233	ENST00000575934	TSPY10	P0CW01	314 aa		32.25	■■■□□ 2.75
ABR-233	ENST00000575934	CERK	Q8TCT0	537 aa		32.25	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms