RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ADGRL1O94910 1474 aa21.44■■□□□ 1.02
RPAIN-213ENST00000573577 ARHGAP5Q13017 1502 aa21.44■■□□□ 1.02
RPAIN-213ENST00000573577 MTUS2Q5JR59 1369 aa21.43■■□□□ 1.02
RPAIN-213ENST00000573577 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
RPAIN-213ENST00000573577 RICTORQ6R327 1708 aa21.41■■□□□ 1.02
RPAIN-213ENST00000573577 PREX2Q70Z35 1606 aa21.41■■□□□ 1.02
RPAIN-213ENST00000573577 SCAPERQ9BY12 1400 aa21.4■■□□□ 1.02
RPAIN-213ENST00000573577 ADRA2BP18089 450 aa21.4■■□□□ 1.02
RPAIN-213ENST00000573577 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.01
RPAIN-213ENST00000573577 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
RPAIN-213ENST00000573577 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
RPAIN-213ENST00000573577 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
RPAIN-213ENST00000573577 ZMYM4Q5VZL5 1548 aa21.37■■□□□ 1.01
RPAIN-213ENST00000573577 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
RPAIN-213ENST00000573577 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
RPAIN-213ENST00000573577 GPATCH8Q9UKJ3 1502 aaKnown RBP21.34■■□□□ 1.01
RPAIN-213ENST00000573577 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
RPAIN-213ENST00000573577 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1
RPAIN-213ENST00000573577 MAGI2Q86UL8 1455 aa21.32■■□□□ 1
RPAIN-213ENST00000573577 ZNF518AQ6AHZ1 1483 aa21.31■■□□□ 1
RPAIN-213ENST00000573577 ABCC1P33527 1531 aa21.3■■□□□ 1
RPAIN-213ENST00000573577 ZFYVE16Q7Z3T8 1539 aa21.29■■□□□ 1
RPAIN-213ENST00000573577 MAP3K1Q13233 1512 aa21.29■■□□□ 1
RPAIN-213ENST00000573577 YEATS2Q9ULM3 1422 aa21.28■■□□□ 1
RPAIN-213ENST00000573577 KDM5CP41229 1560 aa21.27■■□□□ 1
RPAIN-213ENST00000573577 APLP2Q06481 763 aa21.27■■□□□ 1
RPAIN-213ENST00000573577 CFDP1Q9UEE9 299 aaPredicted RBP21.27■■□□□ 1
RPAIN-213ENST00000573577 ARHGEF12Q9NZN5 1544 aa21.27■■□□□ 1
RPAIN-213ENST00000573577 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
RPAIN-213ENST00000573577 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
RPAIN-213ENST00000573577 SAMD9LQ8IVG5 1584 aa21.26■□□□□ 0.99
RPAIN-213ENST00000573577 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
RPAIN-213ENST00000573577 ITSN2Q9NZM3 1697 aa21.25■□□□□ 0.99
RPAIN-213ENST00000573577 AFAP1Q8N556 730 aa21.25■□□□□ 0.99
RPAIN-213ENST00000573577 NCOA2Q15596 1464 aa21.25■□□□□ 0.99
RPAIN-213ENST00000573577 TRAPPC8Q9Y2L5 1435 aa21.24■□□□□ 0.99
RPAIN-213ENST00000573577 SYCP2Q9BX26 1530 aa21.22■□□□□ 0.99
RPAIN-213ENST00000573577 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
RPAIN-213ENST00000573577 HECW2Q9P2P5 1572 aa21.21■□□□□ 0.99
RPAIN-213ENST00000573577 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
RPAIN-213ENST00000573577 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
RPAIN-213ENST00000573577 MLH3Q9UHC1 1453 aa21.2■□□□□ 0.98
RPAIN-213ENST00000573577 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
RPAIN-213ENST00000573577 ATP10AO60312 1499 aa21.19■□□□□ 0.98
RPAIN-213ENST00000573577 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.98
RPAIN-213ENST00000573577 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
RPAIN-213ENST00000573577 BCORL1Q5H9F3 1711 aa21.16■□□□□ 0.98
RPAIN-213ENST00000573577 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
RPAIN-213ENST00000573577 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
RPAIN-213ENST00000573577 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
RPAIN-213ENST00000573577 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
RPAIN-213ENST00000573577 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.98
RPAIN-213ENST00000573577 ABCA6Q8N139 1617 aa21.13■□□□□ 0.97
RPAIN-213ENST00000573577 KIDINS220Q9ULH0 1771 aa21.11■□□□□ 0.97
RPAIN-213ENST00000573577 REREQ9P2R6 1566 aa21.1■□□□□ 0.97
RPAIN-213ENST00000573577 SPAG9O60271 1321 aaKnown RBP21.1■□□□□ 0.97
RPAIN-213ENST00000573577 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
RPAIN-213ENST00000573577 MBD5Q9P267 1494 aa21.1■□□□□ 0.97
RPAIN-213ENST00000573577 MADDQ8WXG6 1647 aa21.09■□□□□ 0.97
RPAIN-213ENST00000573577 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
RPAIN-213ENST00000573577 INO80Q9ULG1 1556 aaPredicted RBP21.08■□□□□ 0.97
RPAIN-213ENST00000573577 ATP7AQ04656 1500 aa21.08■□□□□ 0.96
RPAIN-213ENST00000573577 PTPRMP28827 1452 aa21.06■□□□□ 0.96
RPAIN-213ENST00000573577 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
RPAIN-213ENST00000573577 MLECQ14165 292 aa21.04■□□□□ 0.96
RPAIN-213ENST00000573577 CCDC141Q6ZP82 1450 aa21.04■□□□□ 0.96
RPAIN-213ENST00000573577 AGLP35573 1532 aa21.03■□□□□ 0.96
RPAIN-213ENST00000573577 RSPH4AQ5TD94 716 aa21.01■□□□□ 0.95
RPAIN-213ENST00000573577 RIMS1Q86UR5 1692 aaKnown RBP21.01■□□□□ 0.95
RPAIN-213ENST00000573577 RTEL1-TNFRSF6BF6WH68 1400 aa21.01■□□□□ 0.95
RPAIN-213ENST00000573577 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
RPAIN-213ENST00000573577 FER1L4A9Z1Z3 1794 aa20.98■□□□□ 0.95
RPAIN-213ENST00000573577 A2MP01023 1474 aa20.97■□□□□ 0.95
RPAIN-213ENST00000573577 PLXNC1O60486 1568 aa20.97■□□□□ 0.95
RPAIN-213ENST00000573577 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
RPAIN-213ENST00000573577 FGD6Q6ZV73 1430 aa20.94■□□□□ 0.94
RPAIN-213ENST00000573577 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
RPAIN-213ENST00000573577 TSPY4P0CV99 314 aa20.92■□□□□ 0.94
RPAIN-213ENST00000573577 TSPY10P0CW01 314 aa20.92■□□□□ 0.94
RPAIN-213ENST00000573577 PIAS4Q8N2W9 510 aaPredicted RBP20.91■□□□□ 0.94
RPAIN-213ENST00000573577 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
RPAIN-213ENST00000573577 TCOF1Q13428 1488 aaKnown RBP20.9■□□□□ 0.94
RPAIN-213ENST00000573577 DHX29Q7Z478 1369 aaKnown RBP20.89■□□□□ 0.93
RPAIN-213ENST00000573577 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
RPAIN-213ENST00000573577 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
RPAIN-213ENST00000573577 SHANK2Q9UPX8 1470 aa20.84■□□□□ 0.93
RPAIN-213ENST00000573577 ABCC5O15440 1437 aa20.84■□□□□ 0.93
RPAIN-213ENST00000573577 DNMT1P26358 1616 aaKnown RBP20.83■□□□□ 0.93
RPAIN-213ENST00000573577 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
RPAIN-213ENST00000573577 DAPK1P53355 1430 aa20.83■□□□□ 0.93
RPAIN-213ENST00000573577 CROCC2H7BZ55 1655 aa20.83■□□□□ 0.92
RPAIN-213ENST00000573577 GGT6Q6P531 493 aa20.82■□□□□ 0.92
RPAIN-213ENST00000573577 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
RPAIN-213ENST00000573577 LMTK3Q96Q04 1460 aa20.81■□□□□ 0.92
RPAIN-213ENST00000573577 KIF3BO15066 747 aa20.79■□□□□ 0.92
RPAIN-213ENST00000573577 C3P01024 1663 aa20.79■□□□□ 0.92
RPAIN-213ENST00000573577 MROH2AA6NES4 1674 aa20.78■□□□□ 0.92
RPAIN-213ENST00000573577 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
RPAIN-213ENST00000573577 CLTCQ00610 1675 aaKnown RBP20.76■□□□□ 0.91
RPAIN-213ENST00000573577 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms