RNA–Protein interactions for RNA: ENST00000571489.5

PCTP-204, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best)

Gene PCTP, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-204ENST00000571489 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
PCTP-204ENST00000571489 WASHC2AQ641Q2 1341 aa10.16□□□□□ -0.78
PCTP-204ENST00000571489 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
PCTP-204ENST00000571489 CCDC7Q96M83 1385 aa10.16□□□□□ -0.78
PCTP-204ENST00000571489 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.78
PCTP-204ENST00000571489 NUDCQ9Y266 331 aa10.15□□□□□ -0.78
PCTP-204ENST00000571489 ANKRD30AQ9BXX3 1397 aa10.15□□□□□ -0.78
PCTP-204ENST00000571489 NAIPQ13075 1403 aa10.15□□□□□ -0.78
PCTP-204ENST00000571489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.784e-7■■□□□ 13
PCTP-204ENST00000571489 ROCK2O75116 1388 aaKnown RBP10.15□□□□□ -0.78
PCTP-204ENST00000571489 CUL7Q14999 1698 aa10.14□□□□□ -0.79
PCTP-204ENST00000571489 WDR43Q15061 677 aaKnown RBP eCLIP10.13□□□□□ -0.79
PCTP-204ENST00000571489 SUPT6HQ7KZ85 1726 aaKnown RBP10.12□□□□□ -0.79
PCTP-204ENST00000571489 MIA2Q96PC5 1412 aa10.12□□□□□ -0.79
PCTP-204ENST00000571489 CANXP27824 592 aaKnown RBP10.12□□□□□ -0.79
PCTP-204ENST00000571489 RALBP1Q15311 655 aa10.12□□□□□ -0.79
PCTP-204ENST00000571489 DCAF11Q8TEB1 546 aa10.12□□□□□ -0.79
PCTP-204ENST00000571489 GRIN2BQ13224 1484 aa10.11□□□□□ -0.79
PCTP-204ENST00000571489 RGL3Q3MIN7 710 aa10.11□□□□□ -0.79
PCTP-204ENST00000571489 CARMIL2Q6F5E8 1435 aa10.11□□□□□ -0.79
PCTP-204ENST00000571489 NUP155O75694 1391 aa10.11□□□□□ -0.79
PCTP-204ENST00000571489 SENP3-EIF4A1A0A087X0R7 540 aa10.1□□□□□ -0.79
PCTP-204ENST00000571489 DDRGK1Q96HY6 314 aa10.1□□□□□ -0.79
PCTP-204ENST00000571489 KIF21AQ7Z4S6 1674 aa10.1□□□□□ -0.79
PCTP-204ENST00000571489 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
PCTP-204ENST00000571489 KIF7Q2M1P5 1343 aa10.1□□□□□ -0.79
PCTP-204ENST00000571489 CFAP43Q8NDM7 1665 aa10.09□□□□□ -0.79
PCTP-204ENST00000571489 USP47Q96K76 1375 aa10.09□□□□□ -0.79
PCTP-204ENST00000571489 ARID4BQ4LE39 1312 aaPredicted RBP10.08□□□□□ -0.8
PCTP-204ENST00000571489 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
PCTP-204ENST00000571489 KTN1Q86UP2 1357 aaKnown RBP10.08□□□□□ -0.8
PCTP-204ENST00000571489 PTPN23Q9H3S7 1636 aa10.08□□□□□ -0.8
PCTP-204ENST00000571489 KIF15Q9NS87 1388 aa10.08□□□□□ -0.8
PCTP-204ENST00000571489 PPM1GO15355 546 aaPredicted RBP10.07□□□□□ -0.8
PCTP-204ENST00000571489 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
PCTP-204ENST00000571489 DEKP35659 375 aaKnown RBP10.06□□□□□ -0.8
PCTP-204ENST00000571489 RCAN3Q9UKA8 241 aa10.06□□□□□ -0.8
PCTP-204ENST00000571489 TCERG1O14776 1098 aaKnown RBP10.06□□□□□ -0.8
PCTP-204ENST00000571489 PDE3BQ13370 1112 aa10.06□□□□□ -0.8
PCTP-204ENST00000571489 KNSTRNQ9Y448 316 aa10.06□□□□□ -0.8
PCTP-204ENST00000571489 NLRP13Q86W25 1043 aa10.06□□□□□ -0.8
PCTP-204ENST00000571489 TMF1P82094 1093 aa10.05□□□□□ -0.8
PCTP-204ENST00000571489 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
PCTP-204ENST00000571489 ZNF608Q9ULD9 1512 aaPredicted RBP10.05□□□□□ -0.8
PCTP-204ENST00000571489 AKNAQ7Z591 1439 aa10.04□□□□□ -0.8
PCTP-204ENST00000571489 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
PCTP-204ENST00000571489 THOC2Q8NI27 1593 aaKnown RBP10.04□□□□□ -0.8
PCTP-204ENST00000571489 SNAPC4Q5SXM2 1469 aa10.04□□□□□ -0.8
PCTP-204ENST00000571489 ROCK1Q13464 1354 aa10.04□□□□□ -0.8
PCTP-204ENST00000571489 JPH4Q96JJ6 628 aa10.03□□□□□ -0.8
PCTP-204ENST00000571489 ZNF644Q9H582 1327 aaPredicted RBP10.03□□□□□ -0.8
PCTP-204ENST00000571489 NBPF8Q3BBV2 869 aa10.03□□□□□ -0.8
PCTP-204ENST00000571489 CC2D1BQ5T0F9 858 aaKnown RBP10.03□□□□□ -0.8
PCTP-204ENST00000571489 EPRSP07814 1512 aaKnown RBP10.03□□□□□ -0.8
PCTP-204ENST00000571489 RSPH4AQ5TD94 716 aa10.02□□□□□ -0.8
PCTP-204ENST00000571489 PTPRKQ15262 1439 aa10.02□□□□□ -0.81
PCTP-204ENST00000571489 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
PCTP-204ENST00000571489 UPF2Q9HAU5 1272 aaKnown RBP10.02□□□□□ -0.81
PCTP-204ENST00000571489 DAPK1P53355 1430 aa10.01□□□□□ -0.81
PCTP-204ENST00000571489 CCDC184Q52MB2 194 aa10.01□□□□□ -0.81
PCTP-204ENST00000571489 NCOA1Q15788 1441 aa10□□□□□ -0.81
PCTP-204ENST00000571489 ANKRD30BQ9BXX2 1392 aa10□□□□□ -0.81
PCTP-204ENST00000571489 NEFMP07197 916 aa10□□□□□ -0.81
PCTP-204ENST00000571489 SLC24A1O60721 1099 aa10□□□□□ -0.81
PCTP-204ENST00000571489 ANKRD50Q9ULJ7 1429 aa9.99□□□□□ -0.81
PCTP-204ENST00000571489 CTTNBP2Q8WZ74 1663 aa9.99□□□□□ -0.81
PCTP-204ENST00000571489 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
PCTP-204ENST00000571489 RRP1P56182 461 aaKnown RBP9.99□□□□□ -0.81
PCTP-204ENST00000571489 LAS1LQ9Y4W2 734 aaKnown RBP9.99□□□□□ -0.81
PCTP-204ENST00000571489 IQGAP2Q13576 1575 aa9.98□□□□□ -0.81
PCTP-204ENST00000571489 SMG6Q86US8 1419 aaKnown RBP9.98□□□□□ -0.81
PCTP-204ENST00000571489 UGGT2Q9NYU1 1516 aa9.98□□□□□ -0.81
PCTP-204ENST00000571489 ABCA5Q8WWZ7 1642 aa9.98□□□□□ -0.81
PCTP-204ENST00000571489 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
PCTP-204ENST00000571489 CDK13Q14004 1512 aaKnown RBP9.98□□□□□ -0.81
PCTP-204ENST00000571489 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
PCTP-204ENST00000571489 HNRNPMP52272 730 aaKnown RBP eCLIP9.97□□□□□ -0.81
PCTP-204ENST00000571489 CCDC144AA2RUR9 1427 aa9.97□□□□□ -0.81
PCTP-204ENST00000571489 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
PCTP-204ENST00000571489 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.81
PCTP-204ENST00000571489 CHGAP10645 457 aaKnown RBP9.96□□□□□ -0.81
PCTP-204ENST00000571489 KIAA0586Q9BVV6 1533 aa9.95□□□□□ -0.82
PCTP-204ENST00000571489 MS4A1P11836 297 aa9.95□□□□□ -0.82
PCTP-204ENST00000571489 BECN1Q14457 450 aa9.95□□□□□ -0.82
PCTP-204ENST00000571489 TCOF1Q13428 1488 aaKnown RBP9.95□□□□□ -0.82
PCTP-204ENST00000571489 ABCC5O15440 1437 aa9.95□□□□□ -0.82
PCTP-204ENST00000571489 GRIN2AQ12879 1464 aa9.95□□□□□ -0.82
PCTP-204ENST00000571489 TARBP1Q13395 1621 aaKnown RBP9.95□□□□□ -0.82
PCTP-204ENST00000571489 EXOC6Q8TAG9 804 aa9.94□□□□□ -0.82
PCTP-204ENST00000571489 PNISRQ8TF01 805 aaKnown RBP9.94□□□□□ -0.82
PCTP-204ENST00000571489 WDR62O43379 1518 aa9.94□□□□□ -0.82
PCTP-204ENST00000571489 MSH5O43196 834 aa9.93□□□□□ -0.82
PCTP-204ENST00000571489 PDE4AP27815 886 aa9.93□□□□□ -0.82
PCTP-204ENST00000571489 ADAMTS12P58397 1594 aa9.93□□□□□ -0.82
PCTP-204ENST00000571489 RGS3P49796 1198 aa9.92□□□□□ -0.82
PCTP-204ENST00000571489 USP35Q9P2H5 1018 aa9.92□□□□□ -0.82
PCTP-204ENST00000571489 SYNJ2O15056 1496 aa9.92□□□□□ -0.82
PCTP-204ENST00000571489 MAGI1Q96QZ7 1491 aaPredicted RBP9.92□□□□□ -0.82
PCTP-204ENST00000571489 PRG4Q92954 1404 aaPredicted RBP9.92□□□□□ -0.82
PCTP-204ENST00000571489 PBRM1Q86U86 1689 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms