RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 POGZQ7Z3K3 1410 aa33.62■■■□□ 2.97
LITAF-205ENST00000570904 EFCAB2Q5VUJ9 269 aa33.62■■■□□ 2.97
LITAF-205ENST00000570904 BCORL1Q5H9F3 1711 aa33.62■■■□□ 2.97
LITAF-205ENST00000570904 YEATS2Q9ULM3 1422 aa33.62■■■□□ 2.97
LITAF-205ENST00000570904 ZFYVE16Q7Z3T8 1539 aa33.6■■■□□ 2.97
LITAF-205ENST00000570904 PTPRMP28827 1452 aa33.57■■■□□ 2.97
LITAF-205ENST00000570904 FYCO1Q9BQS8 1478 aa33.57■■■□□ 2.97
LITAF-205ENST00000570904 ARHGAP5Q13017 1502 aa33.57■■■□□ 2.96
LITAF-205ENST00000570904 MADDQ8WXG6 1647 aa33.56■■■□□ 2.96
LITAF-205ENST00000570904 MAGI2Q86UL8 1455 aa33.56■■■□□ 2.96
LITAF-205ENST00000570904 SIGLEC1Q9BZZ2 1709 aa33.5■■■□□ 2.95
LITAF-205ENST00000570904 CDC42BPBQ9Y5S2 1711 aa33.46■■■□□ 2.95
LITAF-205ENST00000570904 PREX2Q70Z35 1606 aa33.44■■■□□ 2.94
LITAF-205ENST00000570904 ZNF518AQ6AHZ1 1483 aa33.44■■■□□ 2.94
LITAF-205ENST00000570904 RIMS1Q86UR5 1692 aaKnown RBP33.42■■■□□ 2.94
LITAF-205ENST00000570904 AFAP1Q8N556 730 aa33.41■■■□□ 2.94
LITAF-205ENST00000570904 KDM5CP41229 1560 aa33.39■■■□□ 2.94
LITAF-205ENST00000570904 ATP10AO60312 1499 aa33.39■■■□□ 2.94
LITAF-205ENST00000570904 C9orf84Q5VXU9 1444 aa33.38■■■□□ 2.93
LITAF-205ENST00000570904 MLECQ14165 292 aa33.38■■■□□ 2.93
LITAF-205ENST00000570904 ABCC1P33527 1531 aa33.35■■■□□ 2.93
LITAF-205ENST00000570904 CDC42BPAQ5VT25 1732 aa33.35■■■□□ 2.93
LITAF-205ENST00000570904 ARHGEF12Q9NZN5 1544 aa33.34■■■□□ 2.93
LITAF-205ENST00000570904 CEP162Q5TB80 1403 aa33.33■■■□□ 2.93
LITAF-205ENST00000570904 MYT1LQ9UL68 1186 aa33.32■■■□□ 2.92
LITAF-205ENST00000570904 TRAPPC8Q9Y2L5 1435 aa33.31■■■□□ 2.92
LITAF-205ENST00000570904 PLPPR3Q6T4P5 718 aa33.31■■■□□ 2.92
LITAF-205ENST00000570904 ITSN2Q9NZM3 1697 aa33.29■■■□□ 2.92
LITAF-205ENST00000570904 DIP2CQ9Y2E4 1556 aa33.27■■■□□ 2.92
LITAF-205ENST00000570904 FER1L4A9Z1Z3 1794 aa33.26■■■□□ 2.92
LITAF-205ENST00000570904 GPATCH8Q9UKJ3 1502 aaKnown RBP33.26■■■□□ 2.91
LITAF-205ENST00000570904 MLH3Q9UHC1 1453 aa33.25■■■□□ 2.91
LITAF-205ENST00000570904 ZNF777Q9ULD5 760 aaPredicted RBP33.25■■■□□ 2.91
LITAF-205ENST00000570904 MTUS2Q5JR59 1369 aa33.24■■■□□ 2.91
LITAF-205ENST00000570904 ABCA6Q8N139 1617 aa33.24■■■□□ 2.91
LITAF-205ENST00000570904 LMTK3Q96Q04 1460 aa33.23■■■□□ 2.91
LITAF-205ENST00000570904 SAMD9LQ8IVG5 1584 aa33.22■■■□□ 2.91
LITAF-205ENST00000570904 CCNB3Q8WWL7 1395 aa33.18■■■□□ 2.9
LITAF-205ENST00000570904 SYCP2Q9BX26 1530 aa33.18■■■□□ 2.9
LITAF-205ENST00000570904 REREQ9P2R6 1566 aa33.17■■■□□ 2.9
LITAF-205ENST00000570904 CFDP1Q9UEE9 299 aaPredicted RBP33.14■■■□□ 2.9
LITAF-205ENST00000570904 KIDINS220Q9ULH0 1771 aa33.14■■■□□ 2.9
LITAF-205ENST00000570904 EHBP1L1Q8N3D4 1523 aa33.13■■■□□ 2.89
LITAF-205ENST00000570904 LOC105371045A0A1W2PR82 267 aa33.12■■■□□ 2.89
LITAF-205ENST00000570904 HNRNPMP52272 730 aaKnown RBP eCLIP33.12■■■□□ 2.891e-6■■■□□ 15.6
LITAF-205ENST00000570904 ILDR1Q86SU0 546 aaPredicted RBP33.12■■■□□ 2.89
LITAF-205ENST00000570904 TIAM1Q13009 1591 aa33.09■■■□□ 2.89
LITAF-205ENST00000570904 HSPA2P54652 639 aa33.08■■■□□ 2.89
LITAF-205ENST00000570904 CEBPAP49715 358 aaPredicted RBP33.07■■■□□ 2.88
LITAF-205ENST00000570904 KIAA1107Q9UPP5 1409 aa33.07■■■□□ 2.88
LITAF-205ENST00000570904 AGLP35573 1532 aa33.07■■■□□ 2.88
LITAF-205ENST00000570904 PLEKHH2Q8IVE3 1493 aa33.06■■■□□ 2.88
LITAF-205ENST00000570904 SPAG9O60271 1321 aaKnown RBP33.05■■■□□ 2.88
LITAF-205ENST00000570904 ZNF644Q9H582 1327 aaPredicted RBP33■■■□□ 2.87
LITAF-205ENST00000570904 ATP7AQ04656 1500 aa32.99■■■□□ 2.87
LITAF-205ENST00000570904 INO80Q9ULG1 1556 aaPredicted RBP32.97■■■□□ 2.87
LITAF-205ENST00000570904 VPS8Q8N3P4 1428 aa32.95■■■□□ 2.87
LITAF-205ENST00000570904 NCOA2Q15596 1464 aa32.94■■■□□ 2.86
LITAF-205ENST00000570904 PREX1Q8TCU6 1659 aa32.94■■■□□ 2.86
LITAF-205ENST00000570904 ESF1Q9H501 851 aaKnown RBP32.93■■■□□ 2.86
LITAF-205ENST00000570904 SUPT6HQ7KZ85 1726 aaKnown RBP32.91■■■□□ 2.86
LITAF-205ENST00000570904 MBD5Q9P267 1494 aa32.91■■■□□ 2.86
LITAF-205ENST00000570904 C3P01024 1663 aa32.9■■■□□ 2.86
LITAF-205ENST00000570904 PLXNC1O60486 1568 aa32.87■■■□□ 2.85
LITAF-205ENST00000570904 A2MP01023 1474 aa32.87■■■□□ 2.85
LITAF-205ENST00000570904 UHRF1BP1Q6BDS2 1440 aa32.85■■■□□ 2.85
LITAF-205ENST00000570904 CNTLNQ9NXG0 1405 aa32.85■■■□□ 2.85
LITAF-205ENST00000570904 CAMSAP2Q08AD1 1489 aa32.82■■■□□ 2.84
LITAF-205ENST00000570904 LRRC9Q6ZRR7 1453 aa32.82■■■□□ 2.84
LITAF-205ENST00000570904 SETD1BQ9UPS6 1966 aaKnown RBP32.78■■■□□ 2.84
LITAF-205ENST00000570904 ADGBQ8N7X0 1667 aa32.78■■■□□ 2.84
LITAF-205ENST00000570904 CCDC141Q6ZP82 1450 aa32.77■■■□□ 2.84
LITAF-205ENST00000570904 RTEL1-TNFRSF6BF6WH68 1400 aa32.77■■■□□ 2.84
LITAF-205ENST00000570904 MROH2AA6NES4 1674 aa32.75■■■□□ 2.83
LITAF-205ENST00000570904 GGT6Q6P531 493 aa32.74■■■□□ 2.83
LITAF-205ENST00000570904 KANK4Q5T7N3 995 aaPredicted RBP32.73■■■□□ 2.83
LITAF-205ENST00000570904 ZMYM3Q14202 1370 aa32.72■■■□□ 2.83
LITAF-205ENST00000570904 FBXO41Q8TF61 875 aa32.72■■■□□ 2.83
LITAF-205ENST00000570904 CLTCQ00610 1675 aaKnown RBP32.72■■■□□ 2.83
LITAF-205ENST00000570904 MAP3K1Q13233 1512 aa32.72■■■□□ 2.83
LITAF-205ENST00000570904 DHX29Q7Z478 1369 aaKnown RBP32.69■■■□□ 2.82
LITAF-205ENST00000570904 STRCQ7RTU9 1775 aa32.67■■■□□ 2.82
LITAF-205ENST00000570904 NPATQ14207 1427 aa32.67■■■□□ 2.82
LITAF-205ENST00000570904 RSPH4AQ5TD94 716 aa32.66■■■□□ 2.82
LITAF-205ENST00000570904 ARHGEF5Q12774 1597 aa32.66■■■□□ 2.82
LITAF-205ENST00000570904 PPP6R1Q9UPN7 881 aa32.6■■■□□ 2.81
LITAF-205ENST00000570904 PTPRKQ15262 1439 aa32.59■■■□□ 2.81
LITAF-205ENST00000570904 MYOM3Q5VTT5 1437 aa32.59■■■□□ 2.81
LITAF-205ENST00000570904 KIF3BO15066 747 aa32.58■■■□□ 2.81
LITAF-205ENST00000570904 TSPY4P0CV99 314 aa32.58■■■□□ 2.81
LITAF-205ENST00000570904 TSPY10P0CW01 314 aa32.58■■■□□ 2.81
LITAF-205ENST00000570904 DMRT2Q9Y5R5 561 aa32.58■■■□□ 2.81
LITAF-205ENST00000570904 MIA2Q96PC5 1412 aa32.54■■■□□ 2.8
LITAF-205ENST00000570904 CERKQ8TCT0 537 aa32.54■■■□□ 2.8
LITAF-205ENST00000570904 NCOA1Q15788 1441 aa32.53■■■□□ 2.8
LITAF-205ENST00000570904 MYO3AQ8NEV4 1616 aa32.52■■■□□ 2.8
LITAF-205ENST00000570904 APLP2Q06481 763 aa32.51■■■□□ 2.79
LITAF-205ENST00000570904 CAMSAP1Q5T5Y3 1602 aa32.5■■■□□ 2.79
LITAF-205ENST00000570904 PTPRTO14522 1441 aa32.5■■■□□ 2.79
LITAF-205ENST00000570904 MAST1Q9Y2H9 1570 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms