RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 KIF3CO14782 793 aa8.66□□□□□ -1.02
CDC27-211ENST00000570740 DOK7Q18PE1 504 aa8.65□□□□□ -1.02
CDC27-211ENST00000570740 C2orf72A6NCS6 295 aa8.63□□□□□ -1.03
CDC27-211ENST00000570740 GTPBP6O43824 516 aaPredicted RBP8.63□□□□□ -1.03
CDC27-211ENST00000570740 PCDH10Q9P2E7 1040 aa8.63□□□□□ -1.03
CDC27-211ENST00000570740 ZNF710Q8N1W2 664 aa8.62□□□□□ -1.03
CDC27-211ENST00000570740 TMC2Q8TDI7 906 aa8.61□□□□□ -1.03
CDC27-211ENST00000570740 MARVELD3Q96A59 401 aa8.61□□□□□ -1.03
CDC27-211ENST00000570740 RIMBP2O15034 1052 aa8.6□□□□□ -1.03
CDC27-211ENST00000570740 HOXB1P14653 301 aaPredicted RBP8.59□□□□□ -1.03
CDC27-211ENST00000570740 ZSWIM6Q9HCJ5 1215 aa8.59□□□□□ -1.03
CDC27-211ENST00000570740 EMP3P54852 163 aa8.58□□□□□ -1.04
CDC27-211ENST00000570740 BBXQ8WY36 941 aaPredicted RBP8.57□□□□□ -1.04
CDC27-211ENST00000570740 GPHNQ9NQX3 736 aaPredicted RBP8.56□□□□□ -1.04
CDC27-211ENST00000570740 GPR153Q6NV75 609 aa8.55□□□□□ -1.04
CDC27-211ENST00000570740 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
CDC27-211ENST00000570740 FOXK1P85037 733 aa8.54□□□□□ -1.04
CDC27-211ENST00000570740 FAM205CA6NFA0 338 aa8.53□□□□□ -1.04
CDC27-211ENST00000570740 SLC34A2O95436 690 aa8.53□□□□□ -1.04
CDC27-211ENST00000570740 HS3ST6Q96QI5 342 aa8.53□□□□□ -1.04
CDC27-211ENST00000570740 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
CDC27-211ENST00000570740 CRISPLD2Q9H0B8 497 aa8.52□□□□□ -1.05
CDC27-211ENST00000570740 POTEB3A0JP26 581 aa8.51□□□□□ -1.05
CDC27-211ENST00000570740 POTEBQ6S5H4 581 aa8.51□□□□□ -1.05
CDC27-211ENST00000570740 DSG2Q14126 1118 aa8.5□□□□□ -1.05
CDC27-211ENST00000570740 PLPP6Q8IY26 295 aa8.5□□□□□ -1.05
CDC27-211ENST00000570740 PDE4AP27815 886 aa8.49□□□□□ -1.05
CDC27-211ENST00000570740 ERBB3P21860 1342 aa8.49□□□□□ -1.05
CDC27-211ENST00000570740 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
CDC27-211ENST00000570740 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDC27-211ENST00000570740 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
CDC27-211ENST00000570740 PCDHGA4Q9Y5G9 962 aa8.48□□□□□ -1.05
CDC27-211ENST00000570740 SPRYD3Q8NCJ5 442 aa8.46□□□□□ -1.06
CDC27-211ENST00000570740 PTCD2Q8WV60 388 aaKnown RBP8.46□□□□□ -1.06
CDC27-211ENST00000570740 VARS2Q5ST30 1063 aaKnown RBP8.45□□□□□ -1.06
CDC27-211ENST00000570740 PPP1R15BQ5SWA1 713 aa8.45□□□□□ -1.06
CDC27-211ENST00000570740 NUDT7P0C024 238 aa8.44□□□□□ -1.06
CDC27-211ENST00000570740 CADPS2Q86UW7 1296 aa8.44□□□□□ -1.06
CDC27-211ENST00000570740 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
CDC27-211ENST00000570740 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
CDC27-211ENST00000570740 MFSD10Q14728 455 aa8.43□□□□□ -1.06
CDC27-211ENST00000570740 LARP6Q9BRS8 491 aaKnown RBP8.43□□□□□ -1.06
CDC27-211ENST00000570740 DDX27Q96GQ7 796 aaKnown RBP8.42□□□□□ -1.06
CDC27-211ENST00000570740 KRTAP3-3Q9BYR6 98 aa8.42□□□□□ -1.06
CDC27-211ENST00000570740 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
CDC27-211ENST00000570740 KDM4FA0A1W2PPD8 638 aa8.41□□□□□ -1.06
CDC27-211ENST00000570740 TBC1D12O60347 775 aa8.4□□□□□ -1.06
CDC27-211ENST00000570740 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
CDC27-211ENST00000570740 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.06
CDC27-211ENST00000570740 OXER1Q8TDS5 423 aa8.4□□□□□ -1.06
CDC27-211ENST00000570740 LHX6Q9UPM6 363 aa8.4□□□□□ -1.06
CDC27-211ENST00000570740 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
CDC27-211ENST00000570740 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.076e-7■□□□□ 9.6
CDC27-211ENST00000570740 SPNS2Q8IVW8 549 aa8.35□□□□□ -1.07
CDC27-211ENST00000570740 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
CDC27-211ENST00000570740 EMILIN3Q9NT22 766 aa8.33□□□□□ -1.08
CDC27-211ENST00000570740 CAMK2BQ13554 666 aa8.32□□□□□ -1.08
CDC27-211ENST00000570740 PBX2P40425 430 aa8.3□□□□□ -1.08
CDC27-211ENST00000570740 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
CDC27-211ENST00000570740 MMRN1Q13201 1228 aa8.29□□□□□ -1.08
CDC27-211ENST00000570740 POTEEQ6S8J3 1075 aa8.29□□□□□ -1.08
CDC27-211ENST00000570740 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
CDC27-211ENST00000570740 EVI5O60447 810 aa8.28□□□□□ -1.08
CDC27-211ENST00000570740 PPP4R3BQ5MIZ7 849 aa8.28□□□□□ -1.08
CDC27-211ENST00000570740 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDC27-211ENST00000570740 AXIN2Q9Y2T1 843 aa8.26□□□□□ -1.09
CDC27-211ENST00000570740 ARHGAP33O14559 1287 aa8.25□□□□□ -1.09
CDC27-211ENST00000570740 FOSBP53539 338 aa8.24□□□□□ -1.09
CDC27-211ENST00000570740 ANKRD13DQ6ZTN6 518 aa8.24□□□□□ -1.09
CDC27-211ENST00000570740 ZNF454Q8N9F8 522 aa8.24□□□□□ -1.09
CDC27-211ENST00000570740 DPYSL4O14531 572 aa8.23□□□□□ -1.09
CDC27-211ENST00000570740 JPH4Q96JJ6 628 aa8.23□□□□□ -1.09
CDC27-211ENST00000570740 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
CDC27-211ENST00000570740 WDR70Q9NW82 654 aa8.22□□□□□ -1.09
CDC27-211ENST00000570740 E2F4Q16254 413 aa8.21□□□□□ -1.1
CDC27-211ENST00000570740 PTGER2P43116 358 aa8.2□□□□□ -1.1
CDC27-211ENST00000570740 PSEN2P49810 448 aa8.2□□□□□ -1.1
CDC27-211ENST00000570740 BCL2L12Q9HB09 334 aa8.2□□□□□ -1.1
CDC27-211ENST00000570740 DMRTA1Q5VZB9 504 aa8.19□□□□□ -1.1
CDC27-211ENST00000570740 ZDHHC16Q969W1 377 aa8.19□□□□□ -1.1
CDC27-211ENST00000570740 PHF14O94880 888 aa8.18□□□□□ -1.1
CDC27-211ENST00000570740 PLCB2Q00722 1185 aa8.18□□□□□ -1.1
CDC27-211ENST00000570740 KCNK17Q96T54 332 aa8.18□□□□□ -1.1
CDC27-211ENST00000570740 ARIH1Q9Y4X5 557 aaPredicted RBP8.18□□□□□ -1.1
CDC27-211ENST00000570740 PCDHGA10Q9Y5H3 936 aa8.18□□□□□ -1.1
CDC27-211ENST00000570740 TK2O00142 265 aa8.17□□□□□ -1.1
CDC27-211ENST00000570740 ADGRD1Q6QNK2 874 aa8.17□□□□□ -1.1
CDC27-211ENST00000570740 KCNH8Q96L42 1107 aa8.17□□□□□ -1.1
CDC27-211ENST00000570740 ADAM33Q9BZ11 813 aa8.17□□□□□ -1.1
CDC27-211ENST00000570740 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
CDC27-211ENST00000570740 PTPREP23469 700 aa8.16□□□□□ -1.1
CDC27-211ENST00000570740 PDIA6Q15084 440 aa8.16□□□□□ -1.1
CDC27-211ENST00000570740 RNF166Q96A37 237 aaPredicted RBP8.16□□□□□ -1.1
CDC27-211ENST00000570740 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
CDC27-211ENST00000570740 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
CDC27-211ENST00000570740 FBXW7Q969H0 707 aa8.14□□□□□ -1.11
CDC27-211ENST00000570740 HRO43593 1189 aa8.13□□□□□ -1.11
CDC27-211ENST00000570740 EPAS1Q99814 870 aa8.13□□□□□ -1.11
CDC27-211ENST00000570740 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
CDC27-211ENST00000570740 DDX12PQ92771 950 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms