RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SNPHO15079 494 aa8.31□□□□□ -1.08
CNOT1-219ENST00000569882 RAD54L2Q9Y4B4 1467 aa8.3□□□□□ -1.08
CNOT1-219ENST00000569882 IER5LQ5T953 404 aa8.29□□□□□ -1.08
CNOT1-219ENST00000569882 MARVELD3Q96A59 401 aa8.29□□□□□ -1.08
CNOT1-219ENST00000569882 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
CNOT1-219ENST00000569882 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
CNOT1-219ENST00000569882 AQRO60306 1485 aaKnown RBP eCLIP8.28□□□□□ -1.085e-8■□□□□ 9.7
CNOT1-219ENST00000569882 SPOCK2Q92563 424 aa8.28□□□□□ -1.08
CNOT1-219ENST00000569882 SGIP1Q9BQI5 828 aa8.28□□□□□ -1.08
CNOT1-219ENST00000569882 TDRD9Q8NDG6 1382 aaKnown RBP8.27□□□□□ -1.09
CNOT1-219ENST00000569882 TTLL13PA6NNM8 815 aa8.27□□□□□ -1.09
CNOT1-219ENST00000569882 PCDHB8Q9UN66 801 aa8.27□□□□□ -1.09
CNOT1-219ENST00000569882 WDR97A6NE52 1622 aa8.26□□□□□ -1.09
CNOT1-219ENST00000569882 GSE1Q14687 1217 aa8.26□□□□□ -1.09
CNOT1-219ENST00000569882 CHD1O14646 1710 aa8.26□□□□□ -1.09
CNOT1-219ENST00000569882 PBRM1Q86U86 1689 aa8.25□□□□□ -1.09
CNOT1-219ENST00000569882 TRIM35Q9UPQ4 493 aa8.25□□□□□ -1.09
CNOT1-219ENST00000569882 TOP2BQ02880 1626 aa8.25□□□□□ -1.09
CNOT1-219ENST00000569882 BIVM-ERCC5R4GMW8 1640 aa8.25□□□□□ -1.09
CNOT1-219ENST00000569882 PLCG2P16885 1265 aa8.24□□□□□ -1.09
CNOT1-219ENST00000569882 CHMP7Q8WUX9 453 aaPredicted RBP8.24□□□□□ -1.09
CNOT1-219ENST00000569882 CIZ1Q9ULV3 898 aaPredicted RBP8.24□□□□□ -1.09
CNOT1-219ENST00000569882 SYNJ1O43426 1573 aa8.23□□□□□ -1.09
CNOT1-219ENST00000569882 GRIN2BQ13224 1484 aa8.23□□□□□ -1.09
CNOT1-219ENST00000569882 GAPVD1Q14C86 1478 aa8.23□□□□□ -1.09
CNOT1-219ENST00000569882 SNAPC4Q5SXM2 1469 aa8.23□□□□□ -1.09
CNOT1-219ENST00000569882 TRIM41Q8WV44 630 aa8.22□□□□□ -1.09
CNOT1-219ENST00000569882 TMEM106CQ9BVX2 250 aa8.22□□□□□ -1.09
CNOT1-219ENST00000569882 MAGI1Q96QZ7 1491 aaPredicted RBP8.21□□□□□ -1.09
CNOT1-219ENST00000569882 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.1
CNOT1-219ENST00000569882 EMP3P54852 163 aa8.21□□□□□ -1.1
CNOT1-219ENST00000569882 ABCA5Q8WWZ7 1642 aa8.19□□□□□ -1.1
CNOT1-219ENST00000569882 CHRM1P11229 460 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-219ENST00000569882 SYNJ2O15056 1496 aa8.18□□□□□ -1.1
CNOT1-219ENST00000569882 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.17□□□□□ -1.1
CNOT1-219ENST00000569882 ZNF467Q7Z7K2 595 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-219ENST00000569882 RIMBP3CA6NJZ7 1639 aa8.14□□□□□ -1.11
CNOT1-219ENST00000569882 RIMBP3BA6NNM3 1639 aa8.14□□□□□ -1.11
CNOT1-219ENST00000569882 RIMBP3Q9UFD9 1639 aa8.14□□□□□ -1.11
CNOT1-219ENST00000569882 ADAMTS12P58397 1594 aa8.14□□□□□ -1.11
CNOT1-219ENST00000569882 ERICH3Q5RHP9 1530 aa8.13□□□□□ -1.11
CNOT1-219ENST00000569882 KIF27Q86VH2 1401 aa8.13□□□□□ -1.11
CNOT1-219ENST00000569882 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
CNOT1-219ENST00000569882 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
CNOT1-219ENST00000569882 ARHGEF11O15085 1522 aa8.13□□□□□ -1.11
CNOT1-219ENST00000569882 FHAD1B1AJZ9 1412 aa8.12□□□□□ -1.11
CNOT1-219ENST00000569882 FAM205CA6NFA0 338 aa8.12□□□□□ -1.11
CNOT1-219ENST00000569882 HS3ST6Q96QI5 342 aa8.12□□□□□ -1.11
CNOT1-219ENST00000569882 GRIN2AQ12879 1464 aa8.12□□□□□ -1.11
CNOT1-219ENST00000569882 PSEN1P49768 467 aa8.11□□□□□ -1.11
CNOT1-219ENST00000569882 IRX5P78411 483 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-219ENST00000569882 CYB5RLQ6IPT4 315 aa8.1□□□□□ -1.11
CNOT1-219ENST00000569882 CUL7Q14999 1698 aa8.1□□□□□ -1.11
CNOT1-219ENST00000569882 RNF166Q96A37 237 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-219ENST00000569882 CLASP1Q7Z460 1538 aa8.08□□□□□ -1.12
CNOT1-219ENST00000569882 PDAP1Q13442 181 aaKnown RBP8.07□□□□□ -1.12
CNOT1-219ENST00000569882 RNF25Q96BH1 459 aaPredicted RBP8.07□□□□□ -1.12
CNOT1-219ENST00000569882 CEP170Q5SW79 1584 aa8.06□□□□□ -1.12
CNOT1-219ENST00000569882 OCEL1Q9H607 264 aa8.05□□□□□ -1.12
CNOT1-219ENST00000569882 ARAP1Q96P48 1450 aa8.04□□□□□ -1.12
CNOT1-219ENST00000569882 NUP160Q12769 1436 aa8.03□□□□□ -1.12
CNOT1-219ENST00000569882 CARMIL1Q5VZK9 1371 aa8.03□□□□□ -1.12
CNOT1-219ENST00000569882 GOLGA2Q08379 1002 aa8.03□□□□□ -1.12
CNOT1-219ENST00000569882 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
CNOT1-219ENST00000569882 CABP2Q9NPB3 220 aa8.03□□□□□ -1.12
CNOT1-219ENST00000569882 IGF1RP08069 1367 aa8.02□□□□□ -1.13
CNOT1-219ENST00000569882 POTEB3A0JP26 581 aa8.02□□□□□ -1.13
CNOT1-219ENST00000569882 MKRN3Q13064 507 aaKnown RBP8.02□□□□□ -1.13
CNOT1-219ENST00000569882 POTEBQ6S5H4 581 aa8.02□□□□□ -1.13
CNOT1-219ENST00000569882 PDCD7Q8N8D1 485 aaKnown RBP8.02□□□□□ -1.13
CNOT1-219ENST00000569882 RUSC2Q8N2Y8 1516 aa8.02□□□□□ -1.13
CNOT1-219ENST00000569882 TTBK1Q5TCY1 1321 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-219ENST00000569882 RIOK3O14730 519 aaKnown RBP8□□□□□ -1.13
CNOT1-219ENST00000569882 JPH4Q96JJ6 628 aa8□□□□□ -1.13
CNOT1-219ENST00000569882 PRG4Q92954 1404 aaPredicted RBP8□□□□□ -1.13
CNOT1-219ENST00000569882 PKD2Q13563 968 aa7.99□□□□□ -1.13
CNOT1-219ENST00000569882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.99□□□□□ -1.135e-13■□□□□ 10.6
CNOT1-219ENST00000569882 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
CNOT1-219ENST00000569882 RAPGEF2Q9Y4G8 1499 aa7.99□□□□□ -1.13
CNOT1-219ENST00000569882 KIAA0586Q9BVV6 1533 aa7.98□□□□□ -1.13
CNOT1-219ENST00000569882 FAM9AQ8IZU1 332 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-219ENST00000569882 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
CNOT1-219ENST00000569882 IQGAP2Q13576 1575 aa7.97□□□□□ -1.13
CNOT1-219ENST00000569882 CARMIL2Q6F5E8 1435 aa7.97□□□□□ -1.13
CNOT1-219ENST00000569882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-219ENST00000569882 DPY19L2Q6NUT2 758 aa7.97□□□□□ -1.13
CNOT1-219ENST00000569882 ZFP91Q96JP5 570 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-219ENST00000569882 ERCC6L2Q5T890 1561 aa7.97□□□□□ -1.13
CNOT1-219ENST00000569882 CTTNBP2Q8WZ74 1663 aa7.96□□□□□ -1.13
CNOT1-219ENST00000569882 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
CNOT1-219ENST00000569882 ECM2O94769 699 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-219ENST00000569882 EFCAB3Q8N7B9 438 aa7.95□□□□□ -1.14
CNOT1-219ENST00000569882 EEA1Q15075 1411 aa7.95□□□□□ -1.14
CNOT1-219ENST00000569882 RGL2O15211 777 aa7.93□□□□□ -1.14
CNOT1-219ENST00000569882 VGFO15240 615 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-219ENST00000569882 RANGAP1P46060 587 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-219ENST00000569882 L3MBTL3Q96JM7 780 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-219ENST00000569882 ERBB3P21860 1342 aa7.91□□□□□ -1.14
CNOT1-219ENST00000569882 PTPRGP23470 1445 aa7.91□□□□□ -1.14
CNOT1-219ENST00000569882 GOLGA3Q08378 1498 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms