RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 SCAPERQ9BY12 1400 aa21■□□□□ 0.95
SCAMP2-211ENST00000569251 SIGLEC1Q9BZZ2 1709 aa21■□□□□ 0.95
SCAMP2-211ENST00000569251 MADDQ8WXG6 1647 aa21■□□□□ 0.95
SCAMP2-211ENST00000569251 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
SCAMP2-211ENST00000569251 POGZQ7Z3K3 1410 aa20.99■□□□□ 0.95
SCAMP2-211ENST00000569251 MAGI2Q86UL8 1455 aa20.99■□□□□ 0.95
SCAMP2-211ENST00000569251 EFCAB2Q5VUJ9 269 aa20.98■□□□□ 0.95
SCAMP2-211ENST00000569251 PTPRMP28827 1452 aa20.98■□□□□ 0.95
SCAMP2-211ENST00000569251 YEATS2Q9ULM3 1422 aa20.97■□□□□ 0.95
SCAMP2-211ENST00000569251 FYCO1Q9BQS8 1478 aa20.97■□□□□ 0.95
SCAMP2-211ENST00000569251 ARID4BQ4LE39 1312 aaPredicted RBP20.97■□□□□ 0.95
SCAMP2-211ENST00000569251 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
SCAMP2-211ENST00000569251 PREX2Q70Z35 1606 aa20.95■□□□□ 0.94
SCAMP2-211ENST00000569251 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
SCAMP2-211ENST00000569251 RIMS1Q86UR5 1692 aaKnown RBP20.93■□□□□ 0.94
SCAMP2-211ENST00000569251 KDM5CP41229 1560 aa20.9■□□□□ 0.94
SCAMP2-211ENST00000569251 ZNF518AQ6AHZ1 1483 aa20.89■□□□□ 0.94
SCAMP2-211ENST00000569251 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
SCAMP2-211ENST00000569251 ITSN2Q9NZM3 1697 aa20.87■□□□□ 0.93
SCAMP2-211ENST00000569251 ATP10AO60312 1499 aa20.87■□□□□ 0.93
SCAMP2-211ENST00000569251 ABCC1P33527 1531 aa20.85■□□□□ 0.93
SCAMP2-211ENST00000569251 AFAP1Q8N556 730 aa20.84■□□□□ 0.93
SCAMP2-211ENST00000569251 C9orf84Q5VXU9 1444 aa20.84■□□□□ 0.93
SCAMP2-211ENST00000569251 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.92
SCAMP2-211ENST00000569251 DIP2CQ9Y2E4 1556 aa20.81■□□□□ 0.92
SCAMP2-211ENST00000569251 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
SCAMP2-211ENST00000569251 MLH3Q9UHC1 1453 aa20.8■□□□□ 0.92
SCAMP2-211ENST00000569251 TRAPPC8Q9Y2L5 1435 aa20.79■□□□□ 0.92
SCAMP2-211ENST00000569251 KIDINS220Q9ULH0 1771 aa20.79■□□□□ 0.92
SCAMP2-211ENST00000569251 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
SCAMP2-211ENST00000569251 GPATCH8Q9UKJ3 1502 aaKnown RBP20.78■□□□□ 0.92
SCAMP2-211ENST00000569251 SAMD9LQ8IVG5 1584 aa20.78■□□□□ 0.92
SCAMP2-211ENST00000569251 REREQ9P2R6 1566 aa20.78■□□□□ 0.92
SCAMP2-211ENST00000569251 MLECQ14165 292 aa20.78■□□□□ 0.92
SCAMP2-211ENST00000569251 LMTK3Q96Q04 1460 aa20.76■□□□□ 0.91
SCAMP2-211ENST00000569251 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
SCAMP2-211ENST00000569251 MYT1LQ9UL68 1186 aa20.73■□□□□ 0.91
SCAMP2-211ENST00000569251 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
SCAMP2-211ENST00000569251 SYCP2Q9BX26 1530 aa20.72■□□□□ 0.91
SCAMP2-211ENST00000569251 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
SCAMP2-211ENST00000569251 ZNF777Q9ULD5 760 aaPredicted RBP20.7■□□□□ 0.9
SCAMP2-211ENST00000569251 AGLP35573 1532 aa20.69■□□□□ 0.9
SCAMP2-211ENST00000569251 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
SCAMP2-211ENST00000569251 CCNB3Q8WWL7 1395 aa20.69■□□□□ 0.9
SCAMP2-211ENST00000569251 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
SCAMP2-211ENST00000569251 ILDR1Q86SU0 546 aaPredicted RBP20.67■□□□□ 0.9
SCAMP2-211ENST00000569251 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
SCAMP2-211ENST00000569251 KIAA1107Q9UPP5 1409 aa20.67■□□□□ 0.9
SCAMP2-211ENST00000569251 PLEKHH2Q8IVE3 1493 aa20.66■□□□□ 0.9
SCAMP2-211ENST00000569251 PREX1Q8TCU6 1659 aa20.66■□□□□ 0.9
SCAMP2-211ENST00000569251 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCAMP2-211ENST00000569251 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
SCAMP2-211ENST00000569251 C3P01024 1663 aa20.64■□□□□ 0.89
SCAMP2-211ENST00000569251 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
SCAMP2-211ENST00000569251 SUPT6HQ7KZ85 1726 aaKnown RBP20.63■□□□□ 0.89
SCAMP2-211ENST00000569251 ATP7AQ04656 1500 aa20.63■□□□□ 0.89
SCAMP2-211ENST00000569251 SPAG9O60271 1321 aaKnown RBP20.62■□□□□ 0.89
SCAMP2-211ENST00000569251 CEBPAP49715 358 aaPredicted RBP20.62■□□□□ 0.89
SCAMP2-211ENST00000569251 HSPA2P54652 639 aa20.61■□□□□ 0.89
SCAMP2-211ENST00000569251 ADGBQ8N7X0 1667 aa20.58■□□□□ 0.88
SCAMP2-211ENST00000569251 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
SCAMP2-211ENST00000569251 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
SCAMP2-211ENST00000569251 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
SCAMP2-211ENST00000569251 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
SCAMP2-211ENST00000569251 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
SCAMP2-211ENST00000569251 MROH2AA6NES4 1674 aa20.56■□□□□ 0.88
SCAMP2-211ENST00000569251 A2MP01023 1474 aa20.53■□□□□ 0.88
SCAMP2-211ENST00000569251 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
SCAMP2-211ENST00000569251 STRCQ7RTU9 1775 aa20.52■□□□□ 0.88
SCAMP2-211ENST00000569251 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
SCAMP2-211ENST00000569251 CLTCQ00610 1675 aaKnown RBP20.51■□□□□ 0.87
SCAMP2-211ENST00000569251 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
SCAMP2-211ENST00000569251 UHRF1BP1Q6BDS2 1440 aa20.5■□□□□ 0.87
SCAMP2-211ENST00000569251 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
SCAMP2-211ENST00000569251 RTEL1-TNFRSF6BF6WH68 1400 aa20.49■□□□□ 0.87
SCAMP2-211ENST00000569251 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
SCAMP2-211ENST00000569251 CCDC141Q6ZP82 1450 aa20.46■□□□□ 0.87
SCAMP2-211ENST00000569251 ARHGEF5Q12774 1597 aa20.45■□□□□ 0.86
SCAMP2-211ENST00000569251 ZMYM3Q14202 1370 aa20.44■□□□□ 0.86
SCAMP2-211ENST00000569251 RSPH4AQ5TD94 716 aa20.43■□□□□ 0.86
SCAMP2-211ENST00000569251 FBXO41Q8TF61 875 aa20.43■□□□□ 0.86
SCAMP2-211ENST00000569251 NPATQ14207 1427 aa20.42■□□□□ 0.86
SCAMP2-211ENST00000569251 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
SCAMP2-211ENST00000569251 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
SCAMP2-211ENST00000569251 GGT6Q6P531 493 aa20.4■□□□□ 0.86
SCAMP2-211ENST00000569251 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
SCAMP2-211ENST00000569251 ZNF142P52746 1687 aaPredicted RBP20.36■□□□□ 0.85
SCAMP2-211ENST00000569251 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
SCAMP2-211ENST00000569251 PTPRKQ15262 1439 aa20.36■□□□□ 0.85
SCAMP2-211ENST00000569251 MYO3AQ8NEV4 1616 aa20.35■□□□□ 0.85
SCAMP2-211ENST00000569251 MAST1Q9Y2H9 1570 aa20.35■□□□□ 0.85
SCAMP2-211ENST00000569251 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
SCAMP2-211ENST00000569251 MIA2Q96PC5 1412 aa20.34■□□□□ 0.85
SCAMP2-211ENST00000569251 TSPY4P0CV99 314 aa20.33■□□□□ 0.85
SCAMP2-211ENST00000569251 TSPY10P0CW01 314 aa20.33■□□□□ 0.85
SCAMP2-211ENST00000569251 PTPRTO14522 1441 aa20.32■□□□□ 0.84
SCAMP2-211ENST00000569251 NCOA1Q15788 1441 aa20.32■□□□□ 0.84
SCAMP2-211ENST00000569251 FAM135AQ9P2D6 1515 aa20.32■□□□□ 0.84
SCAMP2-211ENST00000569251 CAMSAP1Q5T5Y3 1602 aa20.31■□□□□ 0.84
SCAMP2-211ENST00000569251 KIF3BO15066 747 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms