RNA–Protein interactions for RNA: ENST00000568682.5

KARS-210, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-210ENST00000568682 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
KARS-210ENST00000568682 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
KARS-210ENST00000568682 COLQQ9Y215 455 aaPredicted RBP12.82□□□□□ -0.36
KARS-210ENST00000568682 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
KARS-210ENST00000568682 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
KARS-210ENST00000568682 G3V3G9 751 aa12.8□□□□□ -0.36
KARS-210ENST00000568682 NBR1Q14596 966 aa12.8□□□□□ -0.36
KARS-210ENST00000568682 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
KARS-210ENST00000568682 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
KARS-210ENST00000568682 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
KARS-210ENST00000568682 E2F4Q16254 413 aa12.78□□□□□ -0.36
KARS-210ENST00000568682 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
KARS-210ENST00000568682 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
KARS-210ENST00000568682 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
KARS-210ENST00000568682 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
KARS-210ENST00000568682 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
KARS-210ENST00000568682 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
KARS-210ENST00000568682 KIF3CO14782 793 aa12.7□□□□□ -0.38
KARS-210ENST00000568682 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
KARS-210ENST00000568682 FOXK1P85037 733 aa12.69□□□□□ -0.38
KARS-210ENST00000568682 NACADO15069 1562 aa12.66□□□□□ -0.38
KARS-210ENST00000568682 DSG2Q14126 1118 aa12.66□□□□□ -0.38
KARS-210ENST00000568682 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
KARS-210ENST00000568682 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
KARS-210ENST00000568682 TMEM92Q6UXU6 159 aa12.62□□□□□ -0.39
KARS-210ENST00000568682 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
KARS-210ENST00000568682 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
KARS-210ENST00000568682 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
KARS-210ENST00000568682 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
KARS-210ENST00000568682 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
KARS-210ENST00000568682 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
KARS-210ENST00000568682 SPDYE16A6NNV3 312 aaPredicted RBP12.49□□□□□ -0.41
KARS-210ENST00000568682 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
KARS-210ENST00000568682 SEMA3EO15041 775 aa12.49□□□□□ -0.41
KARS-210ENST00000568682 DPYSL4O14531 572 aa12.48□□□□□ -0.41
KARS-210ENST00000568682 PDIA6Q15084 440 aa12.48□□□□□ -0.41
KARS-210ENST00000568682 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
KARS-210ENST00000568682 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
KARS-210ENST00000568682 POTEJP0CG39 1038 aa12.46□□□□□ -0.41
KARS-210ENST00000568682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.46□□□□□ -0.41
KARS-210ENST00000568682 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
KARS-210ENST00000568682 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
KARS-210ENST00000568682 SLC34A2O95436 690 aa12.45□□□□□ -0.42
KARS-210ENST00000568682 BICRAQ9NZM4 1560 aa12.44□□□□□ -0.42
KARS-210ENST00000568682 SMYD5Q6GMV2 418 aa12.44□□□□□ -0.42
KARS-210ENST00000568682 MAMSTRQ6ZN01 415 aa12.44□□□□□ -0.42
KARS-210ENST00000568682 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
KARS-210ENST00000568682 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
KARS-210ENST00000568682 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
KARS-210ENST00000568682 LMOD2Q6P5Q4 547 aa12.42□□□□□ -0.42
KARS-210ENST00000568682 PTCD2Q8WV60 388 aaKnown RBP12.42□□□□□ -0.42
KARS-210ENST00000568682 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
KARS-210ENST00000568682 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.42
KARS-210ENST00000568682 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
KARS-210ENST00000568682 TBC1D12O60347 775 aa12.38□□□□□ -0.43
KARS-210ENST00000568682 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
KARS-210ENST00000568682 PTGER2P43116 358 aa12.34□□□□□ -0.43
KARS-210ENST00000568682 SLAIN1Q8ND83 568 aa12.34□□□□□ -0.43
KARS-210ENST00000568682 ZNF316A6NFI3 1004 aaPredicted RBP12.32□□□□□ -0.44
KARS-210ENST00000568682 EVI5O60447 810 aa12.31□□□□□ -0.44
KARS-210ENST00000568682 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
KARS-210ENST00000568682 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
KARS-210ENST00000568682 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
KARS-210ENST00000568682 HOXB3P14651 431 aaPredicted RBP12.27□□□□□ -0.45
KARS-210ENST00000568682 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
KARS-210ENST00000568682 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
KARS-210ENST00000568682 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
KARS-210ENST00000568682 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
KARS-210ENST00000568682 GRXCR2A6NFK2 248 aa12.23□□□□□ -0.45
KARS-210ENST00000568682 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
KARS-210ENST00000568682 SNPHO15079 494 aa12.22□□□□□ -0.45
KARS-210ENST00000568682 OSBPP22059 807 aa12.21□□□□□ -0.45
KARS-210ENST00000568682 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
KARS-210ENST00000568682 DDX12PQ92771 950 aa12.21□□□□□ -0.45
KARS-210ENST00000568682 LHX8Q68G74 356 aa12.2□□□□□ -0.46
KARS-210ENST00000568682 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
KARS-210ENST00000568682 ZMYND10O75800 440 aa12.18□□□□□ -0.46
KARS-210ENST00000568682 PHF14O94880 888 aa12.18□□□□□ -0.46
KARS-210ENST00000568682 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
KARS-210ENST00000568682 EPAS1Q99814 870 aa12.18□□□□□ -0.46
KARS-210ENST00000568682 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
KARS-210ENST00000568682 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
KARS-210ENST00000568682 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
KARS-210ENST00000568682 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
KARS-210ENST00000568682 PCDHGA10Q9Y5H3 936 aa12.13□□□□□ -0.47
KARS-210ENST00000568682 GPR37O15354 613 aa12.12□□□□□ -0.47
KARS-210ENST00000568682 NUDT7P0C024 238 aa12.12□□□□□ -0.47
KARS-210ENST00000568682 EN1Q05925 392 aaPredicted RBP12.12□□□□□ -0.47
KARS-210ENST00000568682 TYW1BQ6NUM6 668 aa12.12□□□□□ -0.47
KARS-210ENST00000568682 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
KARS-210ENST00000568682 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
KARS-210ENST00000568682 FOSBP53539 338 aa12.11□□□□□ -0.47
KARS-210ENST00000568682 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
KARS-210ENST00000568682 CC2D2AQ9P2K1 1620 aa12.09□□□□□ -0.47
KARS-210ENST00000568682 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
KARS-210ENST00000568682 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
KARS-210ENST00000568682 EIF4G1Q04637 1599 aaKnown RBP12.08□□□□□ -0.48
KARS-210ENST00000568682 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
KARS-210ENST00000568682 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
KARS-210ENST00000568682 FCHSD2O94868 740 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms