RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CARMIL2Q6F5E8 1435 aa7.87□□□□□ -1.15
LINC01541-202ENST00000568095 ABCC2Q92887 1545 aa7.86□□□□□ -1.15
LINC01541-202ENST00000568095 JPH4Q96JJ6 628 aa7.86□□□□□ -1.15
LINC01541-202ENST00000568095 ZCCHC11Q5TAX3 1644 aaKnown RBP7.85□□□□□ -1.15
LINC01541-202ENST00000568095 CDC42BPAQ5VT25 1732 aa7.85□□□□□ -1.15
LINC01541-202ENST00000568095 KIF14Q15058 1648 aa7.85□□□□□ -1.15
LINC01541-202ENST00000568095 PHLDB1Q86UU1 1377 aa7.84□□□□□ -1.15
LINC01541-202ENST00000568095 TCOF1Q13428 1488 aaKnown RBP7.84□□□□□ -1.15
LINC01541-202ENST00000568095 RANGAP1P46060 587 aaPredicted RBP7.84□□□□□ -1.15
LINC01541-202ENST00000568095 KDM5BQ9UGL1 1544 aa7.84□□□□□ -1.16
LINC01541-202ENST00000568095 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.84□□□□□ -1.16
LINC01541-202ENST00000568095 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
LINC01541-202ENST00000568095 P3H3Q8IVL6 736 aa7.83□□□□□ -1.16
LINC01541-202ENST00000568095 VSIG10Q8N0Z9 540 aa7.83□□□□□ -1.16
LINC01541-202ENST00000568095 ATP10BO94823 1461 aa7.83□□□□□ -1.16
LINC01541-202ENST00000568095 NCOA2Q15596 1464 aa7.83□□□□□ -1.16
LINC01541-202ENST00000568095 ITSN2Q9NZM3 1697 aa7.83□□□□□ -1.16
LINC01541-202ENST00000568095 CROCC2H7BZ55 1655 aa7.82□□□□□ -1.16
LINC01541-202ENST00000568095 ABCC10Q5T3U5 1492 aa7.82□□□□□ -1.16
LINC01541-202ENST00000568095 PTPN23Q9H3S7 1636 aa7.81□□□□□ -1.16
LINC01541-202ENST00000568095 HNRNPUL2Q1KMD3 747 aaKnown RBP7.81□□□□□ -1.16
LINC01541-202ENST00000568095 CDC42BPBQ9Y5S2 1711 aa7.81□□□□□ -1.16
LINC01541-202ENST00000568095 UACAQ9BZF9 1416 aa7.8□□□□□ -1.16
LINC01541-202ENST00000568095 PREX2Q70Z35 1606 aa7.8□□□□□ -1.16
LINC01541-202ENST00000568095 TROQ12816 1431 aaPredicted RBP7.79□□□□□ -1.16
LINC01541-202ENST00000568095 MYOM3Q5VTT5 1437 aa7.79□□□□□ -1.16
LINC01541-202ENST00000568095 FBLN2P98095 1184 aa7.79□□□□□ -1.16
LINC01541-202ENST00000568095 FGD6Q6ZV73 1430 aa7.79□□□□□ -1.16
LINC01541-202ENST00000568095 GCC2Q8IWJ2 1684 aa7.79□□□□□ -1.16
LINC01541-202ENST00000568095 TTC37Q6PGP7 1564 aa7.78□□□□□ -1.16
LINC01541-202ENST00000568095 PTPRGP23470 1445 aa7.78□□□□□ -1.16
LINC01541-202ENST00000568095 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
LINC01541-202ENST00000568095 DMRT2Q9Y5R5 561 aa7.78□□□□□ -1.16
LINC01541-202ENST00000568095 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
LINC01541-202ENST00000568095 CCNB3Q8WWL7 1395 aa7.78□□□□□ -1.16
LINC01541-202ENST00000568095 APLP2Q06481 763 aa7.78□□□□□ -1.16
LINC01541-202ENST00000568095 RIMBP3CA6NJZ7 1639 aa7.77□□□□□ -1.17
LINC01541-202ENST00000568095 RIMBP3BA6NNM3 1639 aa7.77□□□□□ -1.17
LINC01541-202ENST00000568095 RIMBP3Q9UFD9 1639 aa7.77□□□□□ -1.17
LINC01541-202ENST00000568095 MIA2Q96PC5 1412 aa7.77□□□□□ -1.17
LINC01541-202ENST00000568095 MYO5CQ9NQX4 1742 aa7.77□□□□□ -1.17
LINC01541-202ENST00000568095 ERICH6Q7L0X2 663 aa7.76□□□□□ -1.17
LINC01541-202ENST00000568095 CNKSR2Q8WXI2 1034 aa7.76□□□□□ -1.17
LINC01541-202ENST00000568095 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC01541-202ENST00000568095 ADGBQ8N7X0 1667 aa7.76□□□□□ -1.17
LINC01541-202ENST00000568095 HOMEZQ8IX15 550 aa7.75□□□□□ -1.17
LINC01541-202ENST00000568095 ABCA9Q8IUA7 1624 aa7.75□□□□□ -1.17
LINC01541-202ENST00000568095 GPATCH8Q9UKJ3 1502 aaKnown RBP7.75□□□□□ -1.17
LINC01541-202ENST00000568095 MAPKBP1O60336 1514 aa7.75□□□□□ -1.17
LINC01541-202ENST00000568095 MTUS2Q5JR59 1369 aa7.74□□□□□ -1.17
LINC01541-202ENST00000568095 ARAP3Q8WWN8 1544 aa7.74□□□□□ -1.17
LINC01541-202ENST00000568095 PTPRKQ15262 1439 aa7.74□□□□□ -1.17
LINC01541-202ENST00000568095 FANCIQ9NVI1 1328 aa7.74□□□□□ -1.17
LINC01541-202ENST00000568095 SAMD9LQ8IVG5 1584 aa7.74□□□□□ -1.17
LINC01541-202ENST00000568095 ARHGEF5Q12774 1597 aa7.74□□□□□ -1.17
LINC01541-202ENST00000568095 AKNAQ7Z591 1439 aa7.73□□□□□ -1.17
LINC01541-202ENST00000568095 KCNH8Q96L42 1107 aa7.72□□□□□ -1.17
LINC01541-202ENST00000568095 OSCARQ8IYS5 282 aa7.72□□□□□ -1.17
LINC01541-202ENST00000568095 CAMSAP2Q08AD1 1489 aa7.71□□□□□ -1.17
LINC01541-202ENST00000568095 MAST1Q9Y2H9 1570 aa7.71□□□□□ -1.17
LINC01541-202ENST00000568095 ADGRL2O95490 1459 aa7.7□□□□□ -1.18
LINC01541-202ENST00000568095 SHANK2Q9UPX8 1470 aa7.7□□□□□ -1.18
LINC01541-202ENST00000568095 WDR7Q9Y4E6 1490 aa7.7□□□□□ -1.18
LINC01541-202ENST00000568095 KDM6BO15054 1643 aa7.7□□□□□ -1.18
LINC01541-202ENST00000568095 CCER2I3L3R5 266 aa7.69□□□□□ -1.18
LINC01541-202ENST00000568095 PPP1R15AO75807 674 aaPredicted RBP7.69□□□□□ -1.18
LINC01541-202ENST00000568095 MYT1LQ9UL68 1186 aa7.69□□□□□ -1.18
LINC01541-202ENST00000568095 MAP3K4Q9Y6R4 1608 aa7.69□□□□□ -1.18
LINC01541-202ENST00000568095 HFM1A2PYH4 1435 aa7.69□□□□□ -1.18
LINC01541-202ENST00000568095 MBD5Q9P267 1494 aa7.68□□□□□ -1.18
LINC01541-202ENST00000568095 ABCC1P33527 1531 aa7.68□□□□□ -1.18
LINC01541-202ENST00000568095 DAPK1P53355 1430 aa7.68□□□□□ -1.18
LINC01541-202ENST00000568095 PPRC1Q5VV67 1664 aaKnown RBP7.67□□□□□ -1.18
LINC01541-202ENST00000568095 ABCC5O15440 1437 aa7.67□□□□□ -1.18
LINC01541-202ENST00000568095 PLXNC1O60486 1568 aa7.67□□□□□ -1.18
LINC01541-202ENST00000568095 GLI2P10070 1586 aa7.67□□□□□ -1.18
LINC01541-202ENST00000568095 NAIPQ13075 1403 aa7.66□□□□□ -1.18
LINC01541-202ENST00000568095 ROCK1Q13464 1354 aa7.66□□□□□ -1.18
LINC01541-202ENST00000568095 DENND4BO75064 1496 aaPredicted RBP7.65□□□□□ -1.18
LINC01541-202ENST00000568095 ASXL2Q76L83 1435 aa7.65□□□□□ -1.18
LINC01541-202ENST00000568095 ARHGEF12Q9NZN5 1544 aa7.65□□□□□ -1.18
LINC01541-202ENST00000568095 KIF13AQ9H1H9 1805 aa7.65□□□□□ -1.18
LINC01541-202ENST00000568095 INO80Q9ULG1 1556 aaPredicted RBP7.65□□□□□ -1.19
LINC01541-202ENST00000568095 PLCH2O75038 1416 aa7.64□□□□□ -1.19
LINC01541-202ENST00000568095 CFAP74Q9C0B2 1584 aa7.64□□□□□ -1.19
LINC01541-202ENST00000568095 DIP2BQ9P265 1576 aa7.64□□□□□ -1.19
LINC01541-202ENST00000568095 SYCP2Q9BX26 1530 aa7.64□□□□□ -1.19
LINC01541-202ENST00000568095 CDK11AQ9UQ88 783 aaPredicted RBP7.64□□□□□ -1.19
LINC01541-202ENST00000568095 KIAA1107Q9UPP5 1409 aa7.64□□□□□ -1.19
LINC01541-202ENST00000568095 SETD5Q9C0A6 1442 aa7.63□□□□□ -1.19
LINC01541-202ENST00000568095 KDM5DQ9BY66 1539 aa7.63□□□□□ -1.19
LINC01541-202ENST00000568095 NEFLP07196 543 aa7.63□□□□□ -1.19
LINC01541-202ENST00000568095 ATXN8OSP0DMR3 200 aa7.63□□□□□ -1.19
LINC01541-202ENST00000568095 ATP1B4Q9UN42 357 aaPredicted RBP7.63□□□□□ -1.19
LINC01541-202ENST00000568095 RAB3GAP2Q9H2M9 1393 aa7.63□□□□□ -1.19
LINC01541-202ENST00000568095 ERICH6BQ5W0A0 696 aa7.63□□□□□ -1.19
LINC01541-202ENST00000568095 BCORL1Q5H9F3 1711 aa7.62□□□□□ -1.19
LINC01541-202ENST00000568095 KDM5CP41229 1560 aa7.62□□□□□ -1.19
LINC01541-202ENST00000568095 KDM2AQ9Y2K7 1162 aa7.62□□□□□ -1.19
LINC01541-202ENST00000568095 ZFYVE16Q7Z3T8 1539 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms