RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 PHLDB1Q86UU1 1377 aa16.88■□□□□ 0.29
ABCA3-205ENST00000567910 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
ABCA3-205ENST00000567910 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
ABCA3-205ENST00000567910 RAPGEF3O95398 923 aa16.86■□□□□ 0.29
ABCA3-205ENST00000567910 KANK4Q5T7N3 995 aaPredicted RBP16.86■□□□□ 0.29
ABCA3-205ENST00000567910 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
ABCA3-205ENST00000567910 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
ABCA3-205ENST00000567910 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
ABCA3-205ENST00000567910 SAMD9LQ8IVG5 1584 aa16.83■□□□□ 0.28
ABCA3-205ENST00000567910 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
ABCA3-205ENST00000567910 ABCC1P33527 1531 aa16.82■□□□□ 0.28
ABCA3-205ENST00000567910 DENND4BO75064 1496 aaPredicted RBP16.82■□□□□ 0.28
ABCA3-205ENST00000567910 POGZQ7Z3K3 1410 aa16.81■□□□□ 0.28
ABCA3-205ENST00000567910 SCAPERQ9BY12 1400 aa16.81■□□□□ 0.28
ABCA3-205ENST00000567910 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
ABCA3-205ENST00000567910 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
ABCA3-205ENST00000567910 ITSN2Q9NZM3 1697 aa16.79■□□□□ 0.28
ABCA3-205ENST00000567910 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
ABCA3-205ENST00000567910 KDM5CP41229 1560 aa16.77■□□□□ 0.28
ABCA3-205ENST00000567910 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
ABCA3-205ENST00000567910 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
ABCA3-205ENST00000567910 ARHGEF40Q8TER5 1519 aa16.75■□□□□ 0.27
ABCA3-205ENST00000567910 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
ABCA3-205ENST00000567910 YEATS2Q9ULM3 1422 aa16.75■□□□□ 0.27
ABCA3-205ENST00000567910 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
ABCA3-205ENST00000567910 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
ABCA3-205ENST00000567910 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
ABCA3-205ENST00000567910 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
ABCA3-205ENST00000567910 MBD5Q9P267 1494 aa16.71■□□□□ 0.27
ABCA3-205ENST00000567910 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
ABCA3-205ENST00000567910 KDM4FA0A1W2PPD8 638 aa16.7■□□□□ 0.26
ABCA3-205ENST00000567910 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
ABCA3-205ENST00000567910 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
ABCA3-205ENST00000567910 HECW2Q9P2P5 1572 aa16.69■□□□□ 0.26
ABCA3-205ENST00000567910 CAMSAP2Q08AD1 1489 aa16.69■□□□□ 0.26
ABCA3-205ENST00000567910 MAGI2Q86UL8 1455 aa16.69■□□□□ 0.26
ABCA3-205ENST00000567910 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
ABCA3-205ENST00000567910 ABCA6Q8N139 1617 aa16.68■□□□□ 0.26
ABCA3-205ENST00000567910 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABCA3-205ENST00000567910 MYOM3Q5VTT5 1437 aa16.67■□□□□ 0.26
ABCA3-205ENST00000567910 DIP2CQ9Y2E4 1556 aa16.67■□□□□ 0.26
ABCA3-205ENST00000567910 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
ABCA3-205ENST00000567910 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
ABCA3-205ENST00000567910 APLP2Q06481 763 aa16.66■□□□□ 0.26
ABCA3-205ENST00000567910 INO80Q9ULG1 1556 aaPredicted RBP16.65■□□□□ 0.26
ABCA3-205ENST00000567910 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
ABCA3-205ENST00000567910 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
ABCA3-205ENST00000567910 ATP10AO60312 1499 aa16.61■□□□□ 0.25
ABCA3-205ENST00000567910 ARHGEF5Q12774 1597 aa16.61■□□□□ 0.25
ABCA3-205ENST00000567910 ADAMTSL3P82987 1691 aa16.61■□□□□ 0.25
ABCA3-205ENST00000567910 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
ABCA3-205ENST00000567910 PTPN23Q9H3S7 1636 aa16.6■□□□□ 0.25
ABCA3-205ENST00000567910 C9orf84Q5VXU9 1444 aa16.6■□□□□ 0.25
ABCA3-205ENST00000567910 FGD6Q6ZV73 1430 aa16.6■□□□□ 0.25
ABCA3-205ENST00000567910 REREQ9P2R6 1566 aa16.6■□□□□ 0.25
ABCA3-205ENST00000567910 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
ABCA3-205ENST00000567910 TCOF1Q13428 1488 aaKnown RBP16.58■□□□□ 0.24
ABCA3-205ENST00000567910 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
ABCA3-205ENST00000567910 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
ABCA3-205ENST00000567910 SPAG9O60271 1321 aaKnown RBP16.56■□□□□ 0.24
ABCA3-205ENST00000567910 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
ABCA3-205ENST00000567910 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
ABCA3-205ENST00000567910 CROCC2H7BZ55 1655 aa16.53■□□□□ 0.24
ABCA3-205ENST00000567910 MAST1Q9Y2H9 1570 aa16.53■□□□□ 0.24
ABCA3-205ENST00000567910 AGLP35573 1532 aa16.53■□□□□ 0.24
ABCA3-205ENST00000567910 RTEL1-TNFRSF6BF6WH68 1400 aa16.53■□□□□ 0.24
ABCA3-205ENST00000567910 ABCC5O15440 1437 aa16.53■□□□□ 0.24
ABCA3-205ENST00000567910 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.23
ABCA3-205ENST00000567910 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
ABCA3-205ENST00000567910 A2MP01023 1474 aa16.5■□□□□ 0.23
ABCA3-205ENST00000567910 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
ABCA3-205ENST00000567910 RIMS1Q86UR5 1692 aaKnown RBP16.49■□□□□ 0.23
ABCA3-205ENST00000567910 DAPK1P53355 1430 aa16.48■□□□□ 0.23
ABCA3-205ENST00000567910 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
ABCA3-205ENST00000567910 FER1L4A9Z1Z3 1794 aa16.48■□□□□ 0.23
ABCA3-205ENST00000567910 PTPRMP28827 1452 aa16.47■□□□□ 0.23
ABCA3-205ENST00000567910 SHANK2Q9UPX8 1470 aa16.47■□□□□ 0.23
ABCA3-205ENST00000567910 MLECQ14165 292 aa16.46■□□□□ 0.23
ABCA3-205ENST00000567910 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
ABCA3-205ENST00000567910 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
ABCA3-205ENST00000567910 AEBP2Q6ZN18 517 aaPredicted RBP16.43■□□□□ 0.22
ABCA3-205ENST00000567910 TSPY4P0CV99 314 aa16.41■□□□□ 0.22
ABCA3-205ENST00000567910 TSPY10P0CW01 314 aa16.41■□□□□ 0.22
ABCA3-205ENST00000567910 RRBP1Q9P2E9 1410 aaKnown RBP16.4■□□□□ 0.22
ABCA3-205ENST00000567910 FAM50AQ14320 339 aaKnown RBP16.4■□□□□ 0.22
ABCA3-205ENST00000567910 ADGRL2O95490 1459 aa16.39■□□□□ 0.21
ABCA3-205ENST00000567910 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
ABCA3-205ENST00000567910 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
ABCA3-205ENST00000567910 C3P01024 1663 aa16.37■□□□□ 0.21
ABCA3-205ENST00000567910 DUOX2Q9NRD8 1548 aa16.37■□□□□ 0.21
ABCA3-205ENST00000567910 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
ABCA3-205ENST00000567910 EIF2AK4Q9P2K8 1649 aaKnown RBP16.37■□□□□ 0.21
ABCA3-205ENST00000567910 KIF15Q9NS87 1388 aa16.37■□□□□ 0.21
ABCA3-205ENST00000567910 CLTCQ00610 1675 aaKnown RBP16.37■□□□□ 0.21
ABCA3-205ENST00000567910 CHIC2Q9UKJ5 165 aa16.36■□□□□ 0.21
ABCA3-205ENST00000567910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.21
ABCA3-205ENST00000567910 RRP7BPQ9NSQ0 103 aa16.34■□□□□ 0.21
ABCA3-205ENST00000567910 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
ABCA3-205ENST00000567910 KIF3BO15066 747 aa16.33■□□□□ 0.2
ABCA3-205ENST00000567910 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms