RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 TSHZ2Q9NRE2 1034 aa21.05■□□□□ 0.96
NIFKP4-201ENST00000567275 TMC2Q8TDI7 906 aa21.01■□□□□ 0.95
NIFKP4-201ENST00000567275 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
NIFKP4-201ENST00000567275 TMEM92Q6UXU6 159 aa20.99■□□□□ 0.95
NIFKP4-201ENST00000567275 PDE4AP27815 886 aa20.95■□□□□ 0.94
NIFKP4-201ENST00000567275 C2orf72A6NCS6 295 aa20.94■□□□□ 0.94
NIFKP4-201ENST00000567275 GPHNQ9NQX3 736 aaPredicted RBP20.92■□□□□ 0.94
NIFKP4-201ENST00000567275 CRISPLD2Q9H0B8 497 aa20.91■□□□□ 0.94
NIFKP4-201ENST00000567275 NCKAP5LQ9HCH0 1330 aa20.91■□□□□ 0.94
NIFKP4-201ENST00000567275 KIF3CO14782 793 aa20.89■□□□□ 0.93
NIFKP4-201ENST00000567275 LARP6Q9BRS8 491 aaKnown RBP20.88■□□□□ 0.93
NIFKP4-201ENST00000567275 DDX27Q96GQ7 796 aaKnown RBP20.81■□□□□ 0.92
NIFKP4-201ENST00000567275 FOXK1P85037 733 aa20.8■□□□□ 0.92
NIFKP4-201ENST00000567275 DSG2Q14126 1118 aa20.79■□□□□ 0.92
NIFKP4-201ENST00000567275 WDR70Q9NW82 654 aa20.78■□□□□ 0.92
NIFKP4-201ENST00000567275 PPP1R15BQ5SWA1 713 aa20.77■□□□□ 0.92
NIFKP4-201ENST00000567275 MFSD10Q14728 455 aa20.75■□□□□ 0.91
NIFKP4-201ENST00000567275 PLPP6Q8IY26 295 aa20.75■□□□□ 0.91
NIFKP4-201ENST00000567275 SNPHO15079 494 aa20.74■□□□□ 0.91
NIFKP4-201ENST00000567275 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
NIFKP4-201ENST00000567275 DOK7Q18PE1 504 aa20.67■□□□□ 0.9
NIFKP4-201ENST00000567275 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
NIFKP4-201ENST00000567275 RIMBP2O15034 1052 aa20.6■□□□□ 0.89
NIFKP4-201ENST00000567275 HOXB3P14651 431 aaPredicted RBP20.6■□□□□ 0.89
NIFKP4-201ENST00000567275 ZNF710Q8N1W2 664 aa20.6■□□□□ 0.89
NIFKP4-201ENST00000567275 KDM2AQ9Y2K7 1162 aa20.6■□□□□ 0.89
NIFKP4-201ENST00000567275 SLC34A2O95436 690 aa20.54■□□□□ 0.88
NIFKP4-201ENST00000567275 E2F4Q16254 413 aa20.54■□□□□ 0.88
NIFKP4-201ENST00000567275 FAM163AQ96GL9 167 aaPredicted RBP20.53■□□□□ 0.88
NIFKP4-201ENST00000567275 CAMK2BQ13554 666 aa20.5■□□□□ 0.87
NIFKP4-201ENST00000567275 UPF1Q92900 1129 aaKnown RBP eCLIP20.5■□□□□ 0.87
NIFKP4-201ENST00000567275 ZSWIM6Q9HCJ5 1215 aa20.49■□□□□ 0.87
NIFKP4-201ENST00000567275 TBC1D12O60347 775 aa20.46■□□□□ 0.87
NIFKP4-201ENST00000567275 PTCD2Q8WV60 388 aaKnown RBP20.46■□□□□ 0.87
NIFKP4-201ENST00000567275 EMILIN3Q9NT22 766 aa20.46■□□□□ 0.87
NIFKP4-201ENST00000567275 PCDHGA4Q9Y5G9 962 aa20.45■□□□□ 0.86
NIFKP4-201ENST00000567275 OXER1Q8TDS5 423 aa20.44■□□□□ 0.86
NIFKP4-201ENST00000567275 ST18O60284 1047 aa20.43■□□□□ 0.86
NIFKP4-201ENST00000567275 ARSIQ5FYB1 569 aa20.41■□□□□ 0.86
NIFKP4-201ENST00000567275 P3H3Q8IVL6 736 aa20.41■□□□□ 0.86
NIFKP4-201ENST00000567275 MAP3K9P80192 1104 aa20.4■□□□□ 0.86
NIFKP4-201ENST00000567275 GPR153Q6NV75 609 aa20.38■□□□□ 0.85
NIFKP4-201ENST00000567275 HOXB1P14653 301 aaPredicted RBP20.37■□□□□ 0.85
NIFKP4-201ENST00000567275 KCNV2Q8TDN2 545 aa20.37■□□□□ 0.85
NIFKP4-201ENST00000567275 DPYSL4O14531 572 aa20.35■□□□□ 0.85
NIFKP4-201ENST00000567275 KHSRPQ92945 711 aaKnown RBP eCLIP20.34■□□□□ 0.85
NIFKP4-201ENST00000567275 NUDT7P0C024 238 aa20.31■□□□□ 0.84
NIFKP4-201ENST00000567275 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
NIFKP4-201ENST00000567275 LCE2DQ5TA82 110 aaPredicted RBP20.29■□□□□ 0.84
NIFKP4-201ENST00000567275 ARHGEF1Q92888 912 aaKnown RBP20.29■□□□□ 0.84
NIFKP4-201ENST00000567275 ARIH1Q9Y4X5 557 aaPredicted RBP20.28■□□□□ 0.84
NIFKP4-201ENST00000567275 MARVELD3Q96A59 401 aa20.26■□□□□ 0.83
NIFKP4-201ENST00000567275 EVI5O60447 810 aa20.25■□□□□ 0.83
NIFKP4-201ENST00000567275 EMP3P54852 163 aa20.25■□□□□ 0.83
NIFKP4-201ENST00000567275 SPDYE16A6NNV3 312 aaPredicted RBP20.18■□□□□ 0.82
NIFKP4-201ENST00000567275 PDIA6Q15084 440 aa20.18■□□□□ 0.82
NIFKP4-201ENST00000567275 KDM4FA0A1W2PPD8 638 aa20.17■□□□□ 0.82
NIFKP4-201ENST00000567275 ERBB3P21860 1342 aa20.16■□□□□ 0.82
NIFKP4-201ENST00000567275 LHX6Q9UPM6 363 aa20.15■□□□□ 0.82
NIFKP4-201ENST00000567275 ANO8Q9HCE9 1232 aaPredicted RBP20.14■□□□□ 0.81
NIFKP4-201ENST00000567275 FAM205CA6NFA0 338 aa20.11■□□□□ 0.81
NIFKP4-201ENST00000567275 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
NIFKP4-201ENST00000567275 VARS2Q5ST30 1063 aaKnown RBP20.06■□□□□ 0.8
NIFKP4-201ENST00000567275 POTEGQ6S5H5 508 aa20.04■□□□□ 0.8
NIFKP4-201ENST00000567275 POTEMA6NI47 508 aa20.03■□□□□ 0.8
NIFKP4-201ENST00000567275 HS3ST6Q96QI5 342 aa20.03■□□□□ 0.8
NIFKP4-201ENST00000567275 ZNF454Q8N9F8 522 aa20.02■□□□□ 0.8
NIFKP4-201ENST00000567275 DDX12PQ92771 950 aa20.02■□□□□ 0.8
NIFKP4-201ENST00000567275 PTGER2P43116 358 aa20.01■□□□□ 0.79
NIFKP4-201ENST00000567275 JPH4Q96JJ6 628 aa20■□□□□ 0.79
NIFKP4-201ENST00000567275 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
NIFKP4-201ENST00000567275 SEMA3EO15041 775 aa19.98■□□□□ 0.79
NIFKP4-201ENST00000567275 NBR1Q14596 966 aa19.98■□□□□ 0.79
NIFKP4-201ENST00000567275 GRXCR2A6NFK2 248 aa19.97■□□□□ 0.79
NIFKP4-201ENST00000567275 FOSBP53539 338 aa19.97■□□□□ 0.79
NIFKP4-201ENST00000567275 PHF14O94880 888 aa19.96■□□□□ 0.79
NIFKP4-201ENST00000567275 PCDHGA10Q9Y5H3 936 aa19.93■□□□□ 0.78
NIFKP4-201ENST00000567275 POTEB3A0JP26 581 aa19.92■□□□□ 0.78
NIFKP4-201ENST00000567275 POTEBQ6S5H4 581 aa19.92■□□□□ 0.78
NIFKP4-201ENST00000567275 EPAS1Q99814 870 aa19.91■□□□□ 0.78
NIFKP4-201ENST00000567275 MLLT3P42568 568 aaPredicted RBP19.9■□□□□ 0.78
NIFKP4-201ENST00000567275 ZDHHC16Q969W1 377 aa19.9■□□□□ 0.78
NIFKP4-201ENST00000567275 TYW1BQ6NUM6 668 aa19.89■□□□□ 0.77
NIFKP4-201ENST00000567275 ZNF687Q8N1G0 1237 aa19.88■□□□□ 0.77
NIFKP4-201ENST00000567275 FBXW7Q969H0 707 aa19.87■□□□□ 0.77
NIFKP4-201ENST00000567275 TESPA1A2RU30 521 aaPredicted RBP19.86■□□□□ 0.77
NIFKP4-201ENST00000567275 SMYD5Q6GMV2 418 aa19.85■□□□□ 0.77
NIFKP4-201ENST00000567275 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
NIFKP4-201ENST00000567275 ADAM33Q9BZ11 813 aa19.81■□□□□ 0.76
NIFKP4-201ENST00000567275 OSBPP22059 807 aa19.79■□□□□ 0.76
NIFKP4-201ENST00000567275 CDAN1Q8IWY9 1227 aa19.79■□□□□ 0.76
NIFKP4-201ENST00000567275 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
NIFKP4-201ENST00000567275 BCL2L12Q9HB09 334 aa19.79■□□□□ 0.76
NIFKP4-201ENST00000567275 TULP1O00294 542 aaPredicted RBP19.78■□□□□ 0.76
NIFKP4-201ENST00000567275 EN1Q05925 392 aaPredicted RBP19.78■□□□□ 0.76
NIFKP4-201ENST00000567275 MAP3K7O43318 606 aa19.77■□□□□ 0.76
NIFKP4-201ENST00000567275 PBX2P40425 430 aa19.76■□□□□ 0.75
NIFKP4-201ENST00000567275 PTPREP23469 700 aa19.75■□□□□ 0.75
NIFKP4-201ENST00000567275 BCANQ96GW7 911 aa19.75■□□□□ 0.75
NIFKP4-201ENST00000567275 ARHGAP33O14559 1287 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms