RNA–Protein interactions for RNA: ENST00000567053.1

AC055876.1-202, humanhuman

BASIC

Gene AC055876.1, Length 138 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-202ENST00000567053 C2orf72A6NCS6 295 aa9.21□□□□□ -0.94
AC055876.1-202ENST00000567053 MARVELD3Q96A59 401 aa9.21□□□□□ -0.94
AC055876.1-202ENST00000567053 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
AC055876.1-202ENST00000567053 KIF3CO14782 793 aa9.17□□□□□ -0.94
AC055876.1-202ENST00000567053 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
AC055876.1-202ENST00000567053 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
AC055876.1-202ENST00000567053 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
AC055876.1-202ENST00000567053 DOK7Q18PE1 504 aa9.15□□□□□ -0.94
AC055876.1-202ENST00000567053 EMP3P54852 163 aa9.12□□□□□ -0.95
AC055876.1-202ENST00000567053 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
AC055876.1-202ENST00000567053 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
AC055876.1-202ENST00000567053 FAM205CA6NFA0 338 aa9.09□□□□□ -0.95
AC055876.1-202ENST00000567053 DSG2Q14126 1118 aa9.09□□□□□ -0.95
AC055876.1-202ENST00000567053 ARSIQ5FYB1 569 aa9.09□□□□□ -0.95
AC055876.1-202ENST00000567053 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.95
AC055876.1-202ENST00000567053 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
AC055876.1-202ENST00000567053 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
AC055876.1-202ENST00000567053 PAXIP1Q6ZW49 1069 aaPredicted RBP9.08□□□□□ -0.96
AC055876.1-202ENST00000567053 PLPP6Q8IY26 295 aa9.08□□□□□ -0.96
AC055876.1-202ENST00000567053 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
AC055876.1-202ENST00000567053 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
AC055876.1-202ENST00000567053 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
AC055876.1-202ENST00000567053 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
AC055876.1-202ENST00000567053 GPR153Q6NV75 609 aa9.07□□□□□ -0.96
AC055876.1-202ENST00000567053 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
AC055876.1-202ENST00000567053 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
AC055876.1-202ENST00000567053 FOXK1P85037 733 aa9.06□□□□□ -0.96
AC055876.1-202ENST00000567053 CDAN1Q8IWY9 1227 aa9.06□□□□□ -0.96
AC055876.1-202ENST00000567053 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
AC055876.1-202ENST00000567053 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
AC055876.1-202ENST00000567053 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
AC055876.1-202ENST00000567053 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
AC055876.1-202ENST00000567053 PCDHGA4Q9Y5G9 962 aa9.03□□□□□ -0.96
AC055876.1-202ENST00000567053 ERBB3P21860 1342 aa9.03□□□□□ -0.96
AC055876.1-202ENST00000567053 NUDT7P0C024 238 aa9.02□□□□□ -0.97
AC055876.1-202ENST00000567053 PDE4AP27815 886 aa9.02□□□□□ -0.97
AC055876.1-202ENST00000567053 PPP1R15BQ5SWA1 713 aa9.02□□□□□ -0.97
AC055876.1-202ENST00000567053 SLC34A2O95436 690 aa9□□□□□ -0.97
AC055876.1-202ENST00000567053 VARS2Q5ST30 1063 aaKnown RBP9□□□□□ -0.97
AC055876.1-202ENST00000567053 UPF1Q92900 1129 aaKnown RBP eCLIP9□□□□□ -0.97
AC055876.1-202ENST00000567053 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
AC055876.1-202ENST00000567053 PLSCR2Q9NRY7 297 aa8.98□□□□□ -0.97
AC055876.1-202ENST00000567053 PCDH10Q9P2E7 1040 aa8.97□□□□□ -0.97
AC055876.1-202ENST00000567053 PTCD2Q8WV60 388 aaKnown RBP8.96□□□□□ -0.98
AC055876.1-202ENST00000567053 ZNF316A6NFI3 1004 aaPredicted RBP8.95□□□□□ -0.98
AC055876.1-202ENST00000567053 MFSD10Q14728 455 aa8.95□□□□□ -0.98
AC055876.1-202ENST00000567053 LHX6Q9UPM6 363 aa8.94□□□□□ -0.98
AC055876.1-202ENST00000567053 OXER1Q8TDS5 423 aa8.93□□□□□ -0.98
AC055876.1-202ENST00000567053 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
AC055876.1-202ENST00000567053 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
AC055876.1-202ENST00000567053 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.98
AC055876.1-202ENST00000567053 TBC1D12O60347 775 aa8.9□□□□□ -0.98
AC055876.1-202ENST00000567053 TSHZ2Q9NRE2 1034 aa8.9□□□□□ -0.98
AC055876.1-202ENST00000567053 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
AC055876.1-202ENST00000567053 ZNF687Q8N1G0 1237 aa8.87□□□□□ -0.99
AC055876.1-202ENST00000567053 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
AC055876.1-202ENST00000567053 AXIN2Q9Y2T1 843 aa8.85□□□□□ -0.99
AC055876.1-202ENST00000567053 EVI5O60447 810 aa8.84□□□□□ -0.99
AC055876.1-202ENST00000567053 DPYSL4O14531 572 aa8.83□□□□□ -1
AC055876.1-202ENST00000567053 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
AC055876.1-202ENST00000567053 CAMK2BQ13554 666 aa8.82□□□□□ -1
AC055876.1-202ENST00000567053 SPNS2Q8IVW8 549 aa8.82□□□□□ -1
AC055876.1-202ENST00000567053 ZNF454Q8N9F8 522 aa8.81□□□□□ -1
AC055876.1-202ENST00000567053 WDR70Q9NW82 654 aa8.81□□□□□ -1
AC055876.1-202ENST00000567053 PLCB2Q00722 1185 aa8.8□□□□□ -1
AC055876.1-202ENST00000567053 ANKRD13DQ6ZTN6 518 aa8.8□□□□□ -1
AC055876.1-202ENST00000567053 PPP4R3BQ5MIZ7 849 aa8.79□□□□□ -1
AC055876.1-202ENST00000567053 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
AC055876.1-202ENST00000567053 E2F4Q16254 413 aa8.78□□□□□ -1
AC055876.1-202ENST00000567053 ANO8Q9HCE9 1232 aaPredicted RBP8.78□□□□□ -1
AC055876.1-202ENST00000567053 PSEN2P49810 448 aa8.77□□□□□ -1.01
AC055876.1-202ENST00000567053 FOSBP53539 338 aa8.76□□□□□ -1.01
AC055876.1-202ENST00000567053 LSM11P83369 360 aaKnown RBP eCLIP8.76□□□□□ -1.01
AC055876.1-202ENST00000567053 MMRN1Q13201 1228 aa8.76□□□□□ -1.01
AC055876.1-202ENST00000567053 KCNK17Q96T54 332 aa8.75□□□□□ -1.01
AC055876.1-202ENST00000567053 ARHGAP33O14559 1287 aa8.74□□□□□ -1.01
AC055876.1-202ENST00000567053 PBX2P40425 430 aa8.74□□□□□ -1.01
AC055876.1-202ENST00000567053 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
AC055876.1-202ENST00000567053 JPH4Q96JJ6 628 aa8.73□□□□□ -1.01
AC055876.1-202ENST00000567053 HAP1P54257 671 aaPredicted RBP8.72□□□□□ -1.01
AC055876.1-202ENST00000567053 DDX12PQ92771 950 aa8.72□□□□□ -1.01
AC055876.1-202ENST00000567053 ADAM33Q9BZ11 813 aa8.72□□□□□ -1.01
AC055876.1-202ENST00000567053 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
AC055876.1-202ENST00000567053 ZDHHC16Q969W1 377 aa8.71□□□□□ -1.02
AC055876.1-202ENST00000567053 PDIA6Q15084 440 aa8.69□□□□□ -1.02
AC055876.1-202ENST00000567053 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
AC055876.1-202ENST00000567053 KCNV2Q8TDN2 545 aa8.68□□□□□ -1.02
AC055876.1-202ENST00000567053 PTPREP23469 700 aa8.67□□□□□ -1.02
AC055876.1-202ENST00000567053 ADGRD1Q6QNK2 874 aa8.67□□□□□ -1.02
AC055876.1-202ENST00000567053 RBM33Q96EV2 1170 aaKnown RBP8.67□□□□□ -1.02
AC055876.1-202ENST00000567053 PHF14O94880 888 aa8.66□□□□□ -1.02
AC055876.1-202ENST00000567053 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
AC055876.1-202ENST00000567053 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
AC055876.1-202ENST00000567053 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
AC055876.1-202ENST00000567053 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
AC055876.1-202ENST00000567053 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
AC055876.1-202ENST00000567053 NBR1Q14596 966 aa8.65□□□□□ -1.02
AC055876.1-202ENST00000567053 ARIH1Q9Y4X5 557 aaPredicted RBP8.64□□□□□ -1.03
AC055876.1-202ENST00000567053 COL9A1P20849 921 aa8.63□□□□□ -1.03
AC055876.1-202ENST00000567053 PTGER2P43116 358 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms