RNA–Protein interactions for RNA: ENST00000566659.1

PDPK1-215, Transcript of 3-phosphoinositide dependent protein kinase 1, human

TSL 3

Gene PDPK1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPK1-215	ENST00000566659	POGZ	Q7Z3K3	1410 aa		33.04	■■■□□ 2.88
PDPK1-215	ENST00000566659	EFCAB2	Q5VUJ9	269 aa		33.04	■■■□□ 2.88
PDPK1-215	ENST00000566659	ZFYVE16	Q7Z3T8	1539 aa		33.02	■■■□□ 2.88
PDPK1-215	ENST00000566659	CDC42BPB	Q9Y5S2	1711 aa		33.02	■■■□□ 2.88
PDPK1-215	ENST00000566659	ARHGAP5	Q13017	1502 aa		33.02	■■■□□ 2.88
PDPK1-215	ENST00000566659	MAGI2	Q86UL8	1455 aa		33	■■■□□ 2.87
PDPK1-215	ENST00000566659	YEATS2	Q9ULM3	1422 aa		32.98	■■■□□ 2.87
PDPK1-215	ENST00000566659	PREX2	Q70Z35	1606 aa		32.98	■■■□□ 2.87
PDPK1-215	ENST00000566659	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.97	■■■□□ 2.87
PDPK1-215	ENST00000566659	HECW2	Q9P2P5	1572 aa		32.96	■■■□□ 2.87
PDPK1-215	ENST00000566659	MADD	Q8WXG6	1647 aa		32.95	■■■□□ 2.86
PDPK1-215	ENST00000566659	SIGLEC1	Q9BZZ2	1709 aa		32.94	■■■□□ 2.86
PDPK1-215	ENST00000566659	CDC42BPA	Q5VT25	1732 aa		32.94	■■■□□ 2.86
PDPK1-215	ENST00000566659	PTPRM	P28827	1452 aa		32.91	■■■□□ 2.86
PDPK1-215	ENST00000566659	ZNF518A	Q6AHZ1	1483 aa		32.89	■■■□□ 2.86
PDPK1-215	ENST00000566659	CEP162	Q5TB80	1403 aa		32.89	■■■□□ 2.86
PDPK1-215	ENST00000566659	KDM5C	P41229	1560 aa		32.87	■■■□□ 2.85
PDPK1-215	ENST00000566659	RIMS1	Q86UR5	1692 aa	Known RBP	32.85	■■■□□ 2.85
PDPK1-215	ENST00000566659	ABCC1	P33527	1531 aa		32.84	■■■□□ 2.85
PDPK1-215	ENST00000566659	ITSN2	Q9NZM3	1697 aa		32.83	■■■□□ 2.85
PDPK1-215	ENST00000566659	ATP10A	O60312	1499 aa		32.81	■■■□□ 2.84
PDPK1-215	ENST00000566659	AFAP1	Q8N556	730 aa		32.79	■■■□□ 2.84
PDPK1-215	ENST00000566659	C9orf84	Q5VXU9	1444 aa		32.78	■■■□□ 2.84
PDPK1-215	ENST00000566659	ARHGEF12	Q9NZN5	1544 aa		32.78	■■■□□ 2.84
PDPK1-215	ENST00000566659	ILDR1	Q86SU0	546 aa	Predicted RBP	32.75	■■■□□ 2.83
PDPK1-215	ENST00000566659	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.75	■■■□□ 2.83
PDPK1-215	ENST00000566659	FER1L4	A9Z1Z3	1794 aa		32.75	■■■□□ 2.83
PDPK1-215	ENST00000566659	TRAPPC8	Q9Y2L5	1435 aa		32.74	■■■□□ 2.83
PDPK1-215	ENST00000566659	DIP2C	Q9Y2E4	1556 aa		32.74	■■■□□ 2.83
PDPK1-215	ENST00000566659	MTUS2	Q5JR59	1369 aa		32.72	■■■□□ 2.83
PDPK1-215	ENST00000566659	SAMD9L	Q8IVG5	1584 aa		32.72	■■■□□ 2.83
PDPK1-215	ENST00000566659	ABCA6	Q8N139	1617 aa		32.72	■■■□□ 2.83
PDPK1-215	ENST00000566659	MLH3	Q9UHC1	1453 aa		32.72	■■■□□ 2.83
PDPK1-215	ENST00000566659	EHBP1L1	Q8N3D4	1523 aa		32.68	■■■□□ 2.82
PDPK1-215	ENST00000566659	MLEC	Q14165	292 aa		32.68	■■■□□ 2.82
PDPK1-215	ENST00000566659	RERE	Q9P2R6	1566 aa		32.67	■■■□□ 2.82
PDPK1-215	ENST00000566659	KIDINS220	Q9ULH0	1771 aa		32.66	■■■□□ 2.82
PDPK1-215	ENST00000566659	LOC105371045	A0A1W2PR82	267 aa		32.66	■■■□□ 2.82
PDPK1-215	ENST00000566659	MYT1L	Q9UL68	1186 aa		32.66	■■■□□ 2.82
PDPK1-215	ENST00000566659	CCNB3	Q8WWL7	1395 aa		32.65	■■■□□ 2.82
PDPK1-215	ENST00000566659	SYCP2	Q9BX26	1530 aa		32.65	■■■□□ 2.82
PDPK1-215	ENST00000566659	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.64	■■■□□ 2.82
PDPK1-215	ENST00000566659	TIAM1	Q13009	1591 aa		32.62	■■■□□ 2.81
PDPK1-215	ENST00000566659	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.59	■■■□□ 2.81
PDPK1-215	ENST00000566659	PLEKHH2	Q8IVE3	1493 aa		32.58	■■■□□ 2.81
PDPK1-215	ENST00000566659	KIAA1107	Q9UPP5	1409 aa		32.57	■■■□□ 2.8
PDPK1-215	ENST00000566659	LMTK3	Q96Q04	1460 aa		32.56	■■■□□ 2.8
PDPK1-215	ENST00000566659	AGL	P35573	1532 aa		32.55	■■■□□ 2.8
PDPK1-215	ENST00000566659	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.54	■■■□□ 2.8	7e-8	■■■□□ 19
PDPK1-215	ENST00000566659	PLPPR3	Q6T4P5	718 aa		32.53	■■■□□ 2.8
PDPK1-215	ENST00000566659	VPS8	Q8N3P4	1428 aa		32.52	■■■□□ 2.8
PDPK1-215	ENST00000566659	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.52	■■■□□ 2.8
PDPK1-215	ENST00000566659	INO80	Q9ULG1	1556 aa	Predicted RBP	32.49	■■■□□ 2.79
PDPK1-215	ENST00000566659	SPAG9	O60271	1321 aa	Known RBP	32.49	■■■□□ 2.79
PDPK1-215	ENST00000566659	ATP7A	Q04656	1500 aa		32.48	■■■□□ 2.79
PDPK1-215	ENST00000566659	NCOA2	Q15596	1464 aa		32.46	■■■□□ 2.79
PDPK1-215	ENST00000566659	ZNF644	Q9H582	1327 aa	Predicted RBP	32.43	■■■□□ 2.78
PDPK1-215	ENST00000566659	SETD1B	Q9UPS6	1966 aa	Known RBP	32.41	■■■□□ 2.78
PDPK1-215	ENST00000566659	PREX1	Q8TCU6	1659 aa		32.4	■■■□□ 2.78
PDPK1-215	ENST00000566659	MBD5	Q9P267	1494 aa		32.4	■■■□□ 2.78
PDPK1-215	ENST00000566659	C3	P01024	1663 aa		32.39	■■■□□ 2.78
PDPK1-215	ENST00000566659	CEBPA	P49715	358 aa	Predicted RBP	32.38	■■■□□ 2.77
PDPK1-215	ENST00000566659	PLXNC1	O60486	1568 aa		32.37	■■■□□ 2.77
PDPK1-215	ENST00000566659	LRRC9	Q6ZRR7	1453 aa		32.37	■■■□□ 2.77
PDPK1-215	ENST00000566659	ADGB	Q8N7X0	1667 aa		32.35	■■■□□ 2.77
PDPK1-215	ENST00000566659	MAP3K1	Q13233	1512 aa		32.35	■■■□□ 2.77
PDPK1-215	ENST00000566659	HSPA2	P54652	639 aa		32.34	■■■□□ 2.77
PDPK1-215	ENST00000566659	A2M	P01023	1474 aa		32.34	■■■□□ 2.77
PDPK1-215	ENST00000566659	CAMSAP2	Q08AD1	1489 aa		32.33	■■■□□ 2.77
PDPK1-215	ENST00000566659	ESF1	Q9H501	851 aa	Known RBP	32.3	■■■□□ 2.76
PDPK1-215	ENST00000566659	CNTLN	Q9NXG0	1405 aa		32.3	■■■□□ 2.76
PDPK1-215	ENST00000566659	MROH2A	A6NES4	1674 aa		32.29	■■■□□ 2.76
PDPK1-215	ENST00000566659	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.27	■■■□□ 2.76
PDPK1-215	ENST00000566659	CCDC141	Q6ZP82	1450 aa		32.27	■■■□□ 2.76
PDPK1-215	ENST00000566659	KANK4	Q5T7N3	995 aa	Predicted RBP	32.23	■■■□□ 2.75
PDPK1-215	ENST00000566659	ARHGEF5	Q12774	1597 aa		32.23	■■■□□ 2.75
PDPK1-215	ENST00000566659	UHRF1BP1	Q6BDS2	1440 aa		32.22	■■■□□ 2.75
PDPK1-215	ENST00000566659	CLTC	Q00610	1675 aa	Known RBP	32.21	■■■□□ 2.75
PDPK1-215	ENST00000566659	RSPH4A	Q5TD94	716 aa		32.18	■■■□□ 2.74
PDPK1-215	ENST00000566659	DHX29	Q7Z478	1369 aa	Known RBP	32.14	■■■□□ 2.74
PDPK1-215	ENST00000566659	MYOM3	Q5VTT5	1437 aa		32.13	■■■□□ 2.73
PDPK1-215	ENST00000566659	STRC	Q7RTU9	1775 aa		32.13	■■■□□ 2.73
PDPK1-215	ENST00000566659	ZMYM3	Q14202	1370 aa		32.12	■■■□□ 2.73
PDPK1-215	ENST00000566659	GGT6	Q6P531	493 aa		32.12	■■■□□ 2.73
PDPK1-215	ENST00000566659	NPAT	Q14207	1427 aa		32.11	■■■□□ 2.73
PDPK1-215	ENST00000566659	MIA2	Q96PC5	1412 aa		32.1	■■■□□ 2.73
PDPK1-215	ENST00000566659	MAST1	Q9Y2H9	1570 aa		32.07	■■■□□ 2.72
PDPK1-215	ENST00000566659	PPP6R1	Q9UPN7	881 aa		32.07	■■■□□ 2.72
PDPK1-215	ENST00000566659	TSPY4	P0CV99	314 aa		32.05	■■■□□ 2.72
PDPK1-215	ENST00000566659	TSPY10	P0CW01	314 aa		32.05	■■■□□ 2.72
PDPK1-215	ENST00000566659	APLP2	Q06481	763 aa		32.05	■■■□□ 2.72
PDPK1-215	ENST00000566659	PTPRK	Q15262	1439 aa		32.01	■■■□□ 2.72
PDPK1-215	ENST00000566659	KIF3B	O15066	747 aa		32	■■■□□ 2.71
PDPK1-215	ENST00000566659	MYO3A	Q8NEV4	1616 aa		32	■■■□□ 2.71
PDPK1-215	ENST00000566659	FAM135A	Q9P2D6	1515 aa		31.99	■■■□□ 2.71
PDPK1-215	ENST00000566659	ZNF142	P52746	1687 aa	Predicted RBP	31.98	■■■□□ 2.71
PDPK1-215	ENST00000566659	PTPN23	Q9H3S7	1636 aa		31.97	■■■□□ 2.71
PDPK1-215	ENST00000566659	FBXO41	Q8TF61	875 aa		31.96	■■■□□ 2.71
PDPK1-215	ENST00000566659	KDM5D	Q9BY66	1539 aa		31.95	■■■□□ 2.71
PDPK1-215	ENST00000566659	DMRT2	Q9Y5R5	561 aa		31.94	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms