RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 RRP7BPQ9NSQ0 103 aa13.13□□□□□ -0.31
BBS4-210ENST00000566400 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
BBS4-210ENST00000566400 ADCY10Q96PN6 1610 aa13.12□□□□□ -0.31
BBS4-210ENST00000566400 NUP160Q12769 1436 aa13.12□□□□□ -0.31
BBS4-210ENST00000566400 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
BBS4-210ENST00000566400 MPHOSPH9Q99550 1183 aa13.11□□□□□ -0.31
BBS4-210ENST00000566400 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
BBS4-210ENST00000566400 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
BBS4-210ENST00000566400 ABCC5O15440 1437 aa13.1□□□□□ -0.31
BBS4-210ENST00000566400 KDM5BQ9UGL1 1544 aa13.09□□□□□ -0.31
BBS4-210ENST00000566400 ADGBQ8N7X0 1667 aa13.07□□□□□ -0.32
BBS4-210ENST00000566400 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
BBS4-210ENST00000566400 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
BBS4-210ENST00000566400 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
BBS4-210ENST00000566400 RPRD2Q5VT52 1461 aaKnown RBP13.06□□□□□ -0.32
BBS4-210ENST00000566400 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
BBS4-210ENST00000566400 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
BBS4-210ENST00000566400 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
BBS4-210ENST00000566400 CFDP1Q9UEE9 299 aaPredicted RBP13.05□□□□□ -0.32
BBS4-210ENST00000566400 KDM6BO15054 1643 aa13.05□□□□□ -0.32
BBS4-210ENST00000566400 GPATCH8Q9UKJ3 1502 aaKnown RBP13.04□□□□□ -0.32
BBS4-210ENST00000566400 ANKRD30BQ9BXX2 1392 aa13.04□□□□□ -0.32
BBS4-210ENST00000566400 KIF14Q15058 1648 aa13.03□□□□□ -0.32
BBS4-210ENST00000566400 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
BBS4-210ENST00000566400 CROCC2H7BZ55 1655 aa13.03□□□□□ -0.32
BBS4-210ENST00000566400 ANKRD30AQ9BXX3 1397 aa13.02□□□□□ -0.32
BBS4-210ENST00000566400 PLB1Q6P1J6 1458 aa13.02□□□□□ -0.32
BBS4-210ENST00000566400 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.32
BBS4-210ENST00000566400 ABCA8O94911 1581 aa13.02□□□□□ -0.32
BBS4-210ENST00000566400 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.33
BBS4-210ENST00000566400 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
BBS4-210ENST00000566400 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
BBS4-210ENST00000566400 ARID3CA6NKF2 412 aa13□□□□□ -0.33
BBS4-210ENST00000566400 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
BBS4-210ENST00000566400 FBLN2P98095 1184 aa12.99□□□□□ -0.33
BBS4-210ENST00000566400 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
BBS4-210ENST00000566400 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
BBS4-210ENST00000566400 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
BBS4-210ENST00000566400 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
BBS4-210ENST00000566400 MYT1Q01538 1121 aa12.97□□□□□ -0.33
BBS4-210ENST00000566400 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
BBS4-210ENST00000566400 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
BBS4-210ENST00000566400 NEFLP07196 543 aa12.96□□□□□ -0.33
BBS4-210ENST00000566400 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
BBS4-210ENST00000566400 CNTLNQ9NXG0 1405 aa12.96□□□□□ -0.34
BBS4-210ENST00000566400 ABCC10Q5T3U5 1492 aa12.95□□□□□ -0.34
BBS4-210ENST00000566400 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
BBS4-210ENST00000566400 ATP10BO94823 1461 aa12.95□□□□□ -0.34
BBS4-210ENST00000566400 PZPP20742 1482 aa12.95□□□□□ -0.34
BBS4-210ENST00000566400 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
BBS4-210ENST00000566400 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
BBS4-210ENST00000566400 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
BBS4-210ENST00000566400 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
BBS4-210ENST00000566400 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
BBS4-210ENST00000566400 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
BBS4-210ENST00000566400 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
BBS4-210ENST00000566400 TSPY4P0CV99 314 aa12.93□□□□□ -0.34
BBS4-210ENST00000566400 TSPY10P0CW01 314 aa12.93□□□□□ -0.34
BBS4-210ENST00000566400 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
BBS4-210ENST00000566400 PTPRGP23470 1445 aa12.91□□□□□ -0.34
BBS4-210ENST00000566400 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
BBS4-210ENST00000566400 CCDC7Q96M83 1385 aa12.91□□□□□ -0.34
BBS4-210ENST00000566400 ZNF777Q9ULD5 760 aaPredicted RBP12.91□□□□□ -0.34
BBS4-210ENST00000566400 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
BBS4-210ENST00000566400 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
BBS4-210ENST00000566400 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
BBS4-210ENST00000566400 FOXD1Q16676 465 aa12.88□□□□□ -0.35
BBS4-210ENST00000566400 CCDC141Q6ZP82 1450 aa12.87□□□□□ -0.35
BBS4-210ENST00000566400 PREX2Q70Z35 1606 aa12.87□□□□□ -0.35
BBS4-210ENST00000566400 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
BBS4-210ENST00000566400 PKD2Q13563 968 aa12.86□□□□□ -0.35
BBS4-210ENST00000566400 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
BBS4-210ENST00000566400 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
BBS4-210ENST00000566400 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
BBS4-210ENST00000566400 ROCK2O75116 1388 aaKnown RBP12.85□□□□□ -0.35
BBS4-210ENST00000566400 NUP155O75694 1391 aa12.85□□□□□ -0.35
BBS4-210ENST00000566400 MAST1Q9Y2H9 1570 aa12.84□□□□□ -0.35
BBS4-210ENST00000566400 KIF15Q9NS87 1388 aa12.84□□□□□ -0.35
BBS4-210ENST00000566400 FKBP8Q14318 412 aa12.84□□□□□ -0.35
BBS4-210ENST00000566400 ERICH6BQ5W0A0 696 aa12.84□□□□□ -0.35
BBS4-210ENST00000566400 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
BBS4-210ENST00000566400 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
BBS4-210ENST00000566400 HNRNPUQ00839 825 aaKnown RBP eCLIP12.82□□□□□ -0.36
BBS4-210ENST00000566400 KIF7Q2M1P5 1343 aa12.81□□□□□ -0.36
BBS4-210ENST00000566400 USP47Q96K76 1375 aa12.81□□□□□ -0.36
BBS4-210ENST00000566400 SAMD9LQ8IVG5 1584 aa12.8□□□□□ -0.36
BBS4-210ENST00000566400 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
BBS4-210ENST00000566400 CDC42BPBQ9Y5S2 1711 aa12.8□□□□□ -0.36
BBS4-210ENST00000566400 KDM5CP41229 1560 aa12.79□□□□□ -0.36
BBS4-210ENST00000566400 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
BBS4-210ENST00000566400 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.36
BBS4-210ENST00000566400 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.36
BBS4-210ENST00000566400 UNC13BO14795 1591 aa12.77□□□□□ -0.37
BBS4-210ENST00000566400 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
BBS4-210ENST00000566400 MYO5CQ9NQX4 1742 aa12.77□□□□□ -0.37
BBS4-210ENST00000566400 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
BBS4-210ENST00000566400 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
BBS4-210ENST00000566400 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
BBS4-210ENST00000566400 ZBED9Q6R2W3 1325 aa12.76□□□□□ -0.37
BBS4-210ENST00000566400 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms