RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 KIF14Q15058 1648 aa27.23■■□□□ 1.95
TSR3-202ENST00000566296 SCAPERQ9BY12 1400 aa27.21■■□□□ 1.95
TSR3-202ENST00000566296 PCF11O94913 1555 aaKnown RBP27.2■■□□□ 1.94
TSR3-202ENST00000566296 YEATS2Q9ULM3 1422 aa27.2■■□□□ 1.94
TSR3-202ENST00000566296 CLIP1P30622 1438 aa27.17■■□□□ 1.94
TSR3-202ENST00000566296 TROQ12816 1431 aaPredicted RBP27.17■■□□□ 1.94
TSR3-202ENST00000566296 EFCAB2Q5VUJ9 269 aa27.15■■□□□ 1.94
TSR3-202ENST00000566296 SIGLEC1Q9BZZ2 1709 aa27.14■■□□□ 1.94
TSR3-202ENST00000566296 LMTK3Q96Q04 1460 aa27.13■■□□□ 1.93
TSR3-202ENST00000566296 ARHGAP5Q13017 1502 aa27.12■■□□□ 1.93
TSR3-202ENST00000566296 LRRIQ1Q96JM4 1722 aa27.12■■□□□ 1.93
TSR3-202ENST00000566296 FER1L4A9Z1Z3 1794 aa27.12■■□□□ 1.93
TSR3-202ENST00000566296 C9orf84Q5VXU9 1444 aa27.09■■□□□ 1.93
TSR3-202ENST00000566296 ATP10AO60312 1499 aa27.07■■□□□ 1.92
TSR3-202ENST00000566296 CCDC18Q5T9S5 1454 aa27.07■■□□□ 1.92
TSR3-202ENST00000566296 ZNF518AQ6AHZ1 1483 aa27.07■■□□□ 1.92
TSR3-202ENST00000566296 MLECQ14165 292 aa27.07■■□□□ 1.92
TSR3-202ENST00000566296 PLPPR3Q6T4P5 718 aa27.06■■□□□ 1.92
TSR3-202ENST00000566296 CASKIN1Q8WXD9 1431 aa27.04■■□□□ 1.92
TSR3-202ENST00000566296 KDM5CP41229 1560 aa27.03■■□□□ 1.92
TSR3-202ENST00000566296 PREX2Q70Z35 1606 aa27.01■■□□□ 1.91
TSR3-202ENST00000566296 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
TSR3-202ENST00000566296 CDC42BPBQ9Y5S2 1711 aa27■■□□□ 1.91
TSR3-202ENST00000566296 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
TSR3-202ENST00000566296 FBXO41Q8TF61 875 aa26.96■■□□□ 1.91
TSR3-202ENST00000566296 FYCO1Q9BQS8 1478 aa26.95■■□□□ 1.91
TSR3-202ENST00000566296 ABCC1P33527 1531 aa26.95■■□□□ 1.9
TSR3-202ENST00000566296 DIP2CQ9Y2E4 1556 aa26.94■■□□□ 1.9
TSR3-202ENST00000566296 AFAP1Q8N556 730 aa26.94■■□□□ 1.9
TSR3-202ENST00000566296 HSPA2P54652 639 aa26.93■■□□□ 1.9
TSR3-202ENST00000566296 REREQ9P2R6 1566 aa26.92■■□□□ 1.9
TSR3-202ENST00000566296 ITSN2Q9NZM3 1697 aa26.92■■□□□ 1.9
TSR3-202ENST00000566296 ABCA6Q8N139 1617 aa26.9■■□□□ 1.9
TSR3-202ENST00000566296 MLH3Q9UHC1 1453 aa26.9■■□□□ 1.9
TSR3-202ENST00000566296 PREX1Q8TCU6 1659 aa26.89■■□□□ 1.9
TSR3-202ENST00000566296 CDC42BPAQ5VT25 1732 aa26.89■■□□□ 1.9
TSR3-202ENST00000566296 TRAPPC8Q9Y2L5 1435 aa26.86■■□□□ 1.89
TSR3-202ENST00000566296 AGLP35573 1532 aa26.81■■□□□ 1.88
TSR3-202ENST00000566296 KIDINS220Q9ULH0 1771 aa26.79■■□□□ 1.88
TSR3-202ENST00000566296 CEBPAP49715 358 aaPredicted RBP26.79■■□□□ 1.88
TSR3-202ENST00000566296 SETD1BQ9UPS6 1966 aaKnown RBP26.78■■□□□ 1.88
TSR3-202ENST00000566296 SAMD9LQ8IVG5 1584 aa26.77■■□□□ 1.88
TSR3-202ENST00000566296 UHRF1BP1Q6BDS2 1440 aa26.77■■□□□ 1.88
TSR3-202ENST00000566296 ESF1Q9H501 851 aaKnown RBP26.76■■□□□ 1.87
TSR3-202ENST00000566296 SYCP2Q9BX26 1530 aa26.75■■□□□ 1.87
TSR3-202ENST00000566296 ZNF777Q9ULD5 760 aaPredicted RBP26.75■■□□□ 1.87
TSR3-202ENST00000566296 C3P01024 1663 aa26.75■■□□□ 1.87
TSR3-202ENST00000566296 GPATCH8Q9UKJ3 1502 aaKnown RBP26.74■■□□□ 1.87
TSR3-202ENST00000566296 PLEKHH2Q8IVE3 1493 aa26.7■■□□□ 1.87
TSR3-202ENST00000566296 CNTLNQ9NXG0 1405 aa26.7■■□□□ 1.86
TSR3-202ENST00000566296 MTUS2Q5JR59 1369 aa26.69■■□□□ 1.86
TSR3-202ENST00000566296 CCNB3Q8WWL7 1395 aa26.68■■□□□ 1.86
TSR3-202ENST00000566296 SPAG9O60271 1321 aaKnown RBP26.67■■□□□ 1.86
TSR3-202ENST00000566296 CFDP1Q9UEE9 299 aaPredicted RBP26.66■■□□□ 1.86
TSR3-202ENST00000566296 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
TSR3-202ENST00000566296 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
TSR3-202ENST00000566296 CERKQ8TCT0 537 aa26.65■■□□□ 1.86
TSR3-202ENST00000566296 STRCQ7RTU9 1775 aa26.64■■□□□ 1.86
TSR3-202ENST00000566296 DMRT2Q9Y5R5 561 aa26.64■■□□□ 1.86
TSR3-202ENST00000566296 INO80Q9ULG1 1556 aaPredicted RBP26.63■■□□□ 1.85
TSR3-202ENST00000566296 HNRNPMP52272 730 aaKnown RBP eCLIP26.63■■□□□ 1.85
TSR3-202ENST00000566296 EHBP1L1Q8N3D4 1523 aa26.63■■□□□ 1.85
TSR3-202ENST00000566296 SUPT6HQ7KZ85 1726 aaKnown RBP26.62■■□□□ 1.85
TSR3-202ENST00000566296 MROH2AA6NES4 1674 aa26.62■■□□□ 1.85
TSR3-202ENST00000566296 PLXNC1O60486 1568 aa26.58■■□□□ 1.85
TSR3-202ENST00000566296 TIAM1Q13009 1591 aa26.58■■□□□ 1.85
TSR3-202ENST00000566296 A2MP01023 1474 aa26.57■■□□□ 1.84
TSR3-202ENST00000566296 NPATQ14207 1427 aa26.56■■□□□ 1.84
TSR3-202ENST00000566296 CEP162Q5TB80 1403 aa26.55■■□□□ 1.84
TSR3-202ENST00000566296 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
TSR3-202ENST00000566296 PTPRTO14522 1441 aa26.53■■□□□ 1.84
TSR3-202ENST00000566296 CLTCQ00610 1675 aaKnown RBP26.52■■□□□ 1.84
TSR3-202ENST00000566296 ZMYM3Q14202 1370 aa26.5■■□□□ 1.83
TSR3-202ENST00000566296 NCOA1Q15788 1441 aa26.49■■□□□ 1.83
TSR3-202ENST00000566296 MBD5Q9P267 1494 aa26.45■■□□□ 1.82
TSR3-202ENST00000566296 CAMSAP1Q5T5Y3 1602 aa26.45■■□□□ 1.82
TSR3-202ENST00000566296 ZNF644Q9H582 1327 aaPredicted RBP26.44■■□□□ 1.82
TSR3-202ENST00000566296 MYO3AQ8NEV4 1616 aa26.44■■□□□ 1.82
TSR3-202ENST00000566296 GGT6Q6P531 493 aa26.44■■□□□ 1.82
TSR3-202ENST00000566296 ZNF142P52746 1687 aaPredicted RBP26.43■■□□□ 1.82
TSR3-202ENST00000566296 RTEL1-TNFRSF6BF6WH68 1400 aa26.42■■□□□ 1.82
TSR3-202ENST00000566296 NCOA2Q15596 1464 aa26.41■■□□□ 1.82
TSR3-202ENST00000566296 PPP6R1Q9UPN7 881 aa26.4■■□□□ 1.82
TSR3-202ENST00000566296 CCDC141Q6ZP82 1450 aa26.4■■□□□ 1.82
TSR3-202ENST00000566296 PTPRKQ15262 1439 aa26.39■■□□□ 1.81
TSR3-202ENST00000566296 CEP170BQ9Y4F5 1589 aaPredicted RBP26.38■■□□□ 1.81
TSR3-202ENST00000566296 CAMSAP2Q08AD1 1489 aa26.38■■□□□ 1.81
TSR3-202ENST00000566296 LTBP4Q8N2S1 1624 aa26.36■■□□□ 1.81
TSR3-202ENST00000566296 PLA2R1Q13018 1463 aa26.35■■□□□ 1.81
TSR3-202ENST00000566296 DHX29Q7Z478 1369 aaKnown RBP26.34■■□□□ 1.81
TSR3-202ENST00000566296 IQSEC2Q5JU85 1478 aa26.33■■□□□ 1.81
TSR3-202ENST00000566296 FAM135AQ9P2D6 1515 aa26.31■■□□□ 1.8
TSR3-202ENST00000566296 RSPH4AQ5TD94 716 aa26.31■■□□□ 1.8
TSR3-202ENST00000566296 ARHGEF5Q12774 1597 aa26.29■■□□□ 1.8
TSR3-202ENST00000566296 NCKAP5LQ9HCH0 1330 aa26.29■■□□□ 1.8
TSR3-202ENST00000566296 VPS8Q8N3P4 1428 aa26.29■■□□□ 1.8
TSR3-202ENST00000566296 KDM5DQ9BY66 1539 aa26.29■■□□□ 1.8
TSR3-202ENST00000566296 PKD2Q13563 968 aa26.28■■□□□ 1.8
TSR3-202ENST00000566296 KIF3BO15066 747 aa26.27■■□□□ 1.8
TSR3-202ENST00000566296 A2ML1A8K2U0 1454 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms