RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 AKNAQ7Z591 1439 aa28.7■■■□□ 2.18
PKD1-230ENST00000565639 ABCC5O15440 1437 aa28.68■■■□□ 2.18
PKD1-230ENST00000565639 CDC42BPBQ9Y5S2 1711 aa28.68■■■□□ 2.18
PKD1-230ENST00000565639 KCNH8Q96L42 1107 aa28.68■■■□□ 2.18
PKD1-230ENST00000565639 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
PKD1-230ENST00000565639 RIMBP3CA6NJZ7 1639 aa28.66■■■□□ 2.18
PKD1-230ENST00000565639 RIMBP3BA6NNM3 1639 aa28.66■■■□□ 2.18
PKD1-230ENST00000565639 RIMBP3Q9UFD9 1639 aa28.66■■■□□ 2.18
PKD1-230ENST00000565639 MYO5CQ9NQX4 1742 aa28.66■■■□□ 2.18
PKD1-230ENST00000565639 ZNF777Q9ULD5 760 aaPredicted RBP28.65■■■□□ 2.18
PKD1-230ENST00000565639 DHX57Q6P158 1386 aaKnown RBP28.64■■■□□ 2.18
PKD1-230ENST00000565639 NAIPQ13075 1403 aa28.64■■■□□ 2.18
PKD1-230ENST00000565639 ASXL2Q76L83 1435 aa28.64■■■□□ 2.18
PKD1-230ENST00000565639 ROCK1Q13464 1354 aa28.63■■■□□ 2.17
PKD1-230ENST00000565639 CLSPNQ9HAW4 1339 aa28.61■■■□□ 2.17
PKD1-230ENST00000565639 PLCH2O75038 1416 aa28.6■■■□□ 2.17
PKD1-230ENST00000565639 ARHGAP5Q13017 1502 aa28.59■■■□□ 2.17
PKD1-230ENST00000565639 GCC2Q8IWJ2 1684 aa28.59■■■□□ 2.17
PKD1-230ENST00000565639 SAMD9LQ8IVG5 1584 aa28.58■■■□□ 2.17
PKD1-230ENST00000565639 CHIC2Q9UKJ5 165 aa28.58■■■□□ 2.17
PKD1-230ENST00000565639 CROCC2H7BZ55 1655 aa28.58■■■□□ 2.16
PKD1-230ENST00000565639 ARAP3Q8WWN8 1544 aa28.57■■■□□ 2.16
PKD1-230ENST00000565639 ARHGEF5Q12774 1597 aa28.57■■■□□ 2.16
PKD1-230ENST00000565639 ABCA9Q8IUA7 1624 aa28.55■■■□□ 2.16
PKD1-230ENST00000565639 SHANK2Q9UPX8 1470 aa28.54■■■□□ 2.16
PKD1-230ENST00000565639 PLEKHH2Q8IVE3 1493 aa28.54■■■□□ 2.16
PKD1-230ENST00000565639 MBD5Q9P267 1494 aa28.53■■■□□ 2.16
PKD1-230ENST00000565639 RRP7BPQ9NSQ0 103 aa28.53■■■□□ 2.16
PKD1-230ENST00000565639 RSPH4AQ5TD94 716 aa28.52■■■□□ 2.16
PKD1-230ENST00000565639 ADGRL2O95490 1459 aa28.52■■■□□ 2.16
PKD1-230ENST00000565639 ADGBQ8N7X0 1667 aa28.52■■■□□ 2.16
PKD1-230ENST00000565639 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.16
PKD1-230ENST00000565639 KIAA1107Q9UPP5 1409 aa28.51■■■□□ 2.15
PKD1-230ENST00000565639 EFCAB2Q5VUJ9 269 aa28.5■■■□□ 2.15
PKD1-230ENST00000565639 CCDC141Q6ZP82 1450 aa28.47■■■□□ 2.15
PKD1-230ENST00000565639 NCOA1Q15788 1441 aa28.47■■■□□ 2.15
PKD1-230ENST00000565639 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
PKD1-230ENST00000565639 HNRNPMP52272 730 aaKnown RBP eCLIP28.46■■■□□ 2.15
PKD1-230ENST00000565639 MAPKBP1O60336 1514 aa28.46■■■□□ 2.15
PKD1-230ENST00000565639 SYCP2Q9BX26 1530 aa28.45■■■□□ 2.14
PKD1-230ENST00000565639 C9orf84Q5VXU9 1444 aa28.44■■■□□ 2.14
PKD1-230ENST00000565639 ANKRD30AQ9BXX3 1397 aa28.44■■■□□ 2.14
PKD1-230ENST00000565639 TSPY4P0CV99 314 aa28.44■■■□□ 2.14
PKD1-230ENST00000565639 TSPY10P0CW01 314 aa28.44■■■□□ 2.14
PKD1-230ENST00000565639 ABCC1P33527 1531 aa28.4■■■□□ 2.14
PKD1-230ENST00000565639 MAST1Q9Y2H9 1570 aa28.38■■■□□ 2.13
PKD1-230ENST00000565639 KDM6BO15054 1643 aa28.38■■■□□ 2.13
PKD1-230ENST00000565639 ARHGEF12Q9NZN5 1544 aa28.36■■■□□ 2.13
PKD1-230ENST00000565639 FANCAO15360 1455 aa28.36■■■□□ 2.13
PKD1-230ENST00000565639 CD109Q6YHK3 1445 aa28.31■■■□□ 2.12
PKD1-230ENST00000565639 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
PKD1-230ENST00000565639 KIF15Q9NS87 1388 aa28.27■■■□□ 2.12
PKD1-230ENST00000565639 CFAP74Q9C0B2 1584 aa28.26■■■□□ 2.11
PKD1-230ENST00000565639 PLXNC1O60486 1568 aa28.26■■■□□ 2.11
PKD1-230ENST00000565639 GLI2P10070 1586 aa28.26■■■□□ 2.11
PKD1-230ENST00000565639 TRAPPC8Q9Y2L5 1435 aa28.26■■■□□ 2.11
PKD1-230ENST00000565639 TRIM52Q96A61 297 aa28.24■■■□□ 2.11
PKD1-230ENST00000565639 ADGRL1O94910 1474 aa28.24■■■□□ 2.11
PKD1-230ENST00000565639 RTEL1-TNFRSF6BF6WH68 1400 aa28.2■■■□□ 2.11
PKD1-230ENST00000565639 SCAPERQ9BY12 1400 aa28.2■■■□□ 2.1
PKD1-230ENST00000565639 MAP3K4Q9Y6R4 1608 aa28.19■■■□□ 2.1
PKD1-230ENST00000565639 MPHOSPH9Q99550 1183 aa28.17■■■□□ 2.1
PKD1-230ENST00000565639 NEO1Q92859 1461 aa28.16■■■□□ 2.1
PKD1-230ENST00000565639 SPAG9O60271 1321 aaKnown RBP28.15■■■□□ 2.1
PKD1-230ENST00000565639 DENND4BO75064 1496 aaPredicted RBP28.15■■■□□ 2.1
PKD1-230ENST00000565639 DIP2BQ9P265 1576 aa28.15■■■□□ 2.1
PKD1-230ENST00000565639 DUOX2Q9NRD8 1548 aa28.14■■■□□ 2.1
PKD1-230ENST00000565639 AFAP1Q8N556 730 aa28.14■■■□□ 2.1
PKD1-230ENST00000565639 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
PKD1-230ENST00000565639 INO80Q9ULG1 1556 aaPredicted RBP28.11■■■□□ 2.09
PKD1-230ENST00000565639 PZPP20742 1482 aa28.1■■■□□ 2.09
PKD1-230ENST00000565639 ZNF518AQ6AHZ1 1483 aa28.1■■■□□ 2.09
PKD1-230ENST00000565639 KDM5DQ9BY66 1539 aa28.1■■■□□ 2.09
PKD1-230ENST00000565639 TIMELESSQ9UNS1 1208 aa28.1■■■□□ 2.09
PKD1-230ENST00000565639 ERBINQ96RT1 1412 aa28.09■■■□□ 2.09
PKD1-230ENST00000565639 ATP7AQ04656 1500 aa28.08■■■□□ 2.09
PKD1-230ENST00000565639 SIN3AQ96ST3 1273 aa28.08■■■□□ 2.09
PKD1-230ENST00000565639 SLC4A1APQ9BWU0 796 aaKnown RBP28.07■■■□□ 2.08
PKD1-230ENST00000565639 FAM69CQ0P6D2 419 aa28.06■■■□□ 2.08
PKD1-230ENST00000565639 POGZQ7Z3K3 1410 aa28.05■■■□□ 2.08
PKD1-230ENST00000565639 NUP155O75694 1391 aa28.03■■■□□ 2.08
PKD1-230ENST00000565639 KDM5CP41229 1560 aa28.03■■■□□ 2.08
PKD1-230ENST00000565639 UNC13BO14795 1591 aa28.02■■■□□ 2.08
PKD1-230ENST00000565639 NEUROD1Q13562 356 aa28.02■■■□□ 2.08
PKD1-230ENST00000565639 ANKRD30BQ9BXX2 1392 aa27.98■■■□□ 2.07
PKD1-230ENST00000565639 KIDINS220Q9ULH0 1771 aa27.98■■■□□ 2.07
PKD1-230ENST00000565639 MLH3Q9UHC1 1453 aa27.97■■■□□ 2.07
PKD1-230ENST00000565639 MAGI2Q86UL8 1455 aa27.96■■■□□ 2.07
PKD1-230ENST00000565639 TEX14Q8IWB6 1497 aa27.95■■■□□ 2.06
PKD1-230ENST00000565639 HECW2Q9P2P5 1572 aa27.93■■■□□ 2.06
PKD1-230ENST00000565639 FAM135AQ9P2D6 1515 aa27.93■■■□□ 2.06
PKD1-230ENST00000565639 PPRC1Q5VV67 1664 aaKnown RBP27.93■■■□□ 2.06
PKD1-230ENST00000565639 KIF13AQ9H1H9 1805 aa27.92■■■□□ 2.06
PKD1-230ENST00000565639 PKD2Q13563 968 aa27.92■■■□□ 2.06
PKD1-230ENST00000565639 FOXD1Q16676 465 aa27.92■■■□□ 2.06
PKD1-230ENST00000565639 DHX29Q7Z478 1369 aaKnown RBP27.92■■■□□ 2.06
PKD1-230ENST00000565639 MYT1LQ9UL68 1186 aa27.91■■■□□ 2.06
PKD1-230ENST00000565639 IQGAP3Q86VI3 1631 aa27.91■■■□□ 2.06
PKD1-230ENST00000565639 TONSLQ96HA7 1378 aa27.91■■■□□ 2.06
PKD1-230ENST00000565639 EIF2AK4Q9P2K8 1649 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms