RNA–Protein interactions for RNA: ENST00000565362.5

PDXDC1-211, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-211ENST00000565362 CLIP1P30622 1438 aa17.53■□□□□ 0.4
PDXDC1-211ENST00000565362 YEATS2Q9ULM3 1422 aa17.53■□□□□ 0.4
PDXDC1-211ENST00000565362 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
PDXDC1-211ENST00000565362 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
PDXDC1-211ENST00000565362 ZFYVE16Q7Z3T8 1539 aa17.51■□□□□ 0.39
PDXDC1-211ENST00000565362 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
PDXDC1-211ENST00000565362 PCF11O94913 1555 aaKnown RBP17.49■□□□□ 0.39
PDXDC1-211ENST00000565362 MADDQ8WXG6 1647 aa17.49■□□□□ 0.39
PDXDC1-211ENST00000565362 FYCO1Q9BQS8 1478 aa17.46■□□□□ 0.39
PDXDC1-211ENST00000565362 ARHGAP5Q13017 1502 aa17.46■□□□□ 0.39
PDXDC1-211ENST00000565362 ATP10AO60312 1499 aa17.44■□□□□ 0.38
PDXDC1-211ENST00000565362 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
PDXDC1-211ENST00000565362 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
PDXDC1-211ENST00000565362 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
PDXDC1-211ENST00000565362 KDM5CP41229 1560 aa17.42■□□□□ 0.38
PDXDC1-211ENST00000565362 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
PDXDC1-211ENST00000565362 C9orf84Q5VXU9 1444 aa17.41■□□□□ 0.38
PDXDC1-211ENST00000565362 RIMS1Q86UR5 1692 aaKnown RBP17.4■□□□□ 0.38
PDXDC1-211ENST00000565362 PREX2Q70Z35 1606 aa17.39■□□□□ 0.38
PDXDC1-211ENST00000565362 MLH3Q9UHC1 1453 aa17.38■□□□□ 0.37
PDXDC1-211ENST00000565362 ARHGEF12Q9NZN5 1544 aa17.38■□□□□ 0.37
PDXDC1-211ENST00000565362 MLECQ14165 292 aa17.38■□□□□ 0.37
PDXDC1-211ENST00000565362 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
PDXDC1-211ENST00000565362 ILDR1Q86SU0 546 aaPredicted RBP17.37■□□□□ 0.37
PDXDC1-211ENST00000565362 TRAPPC8Q9Y2L5 1435 aa17.37■□□□□ 0.37
PDXDC1-211ENST00000565362 ABCC1P33527 1531 aa17.37■□□□□ 0.37
PDXDC1-211ENST00000565362 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
PDXDC1-211ENST00000565362 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
PDXDC1-211ENST00000565362 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
PDXDC1-211ENST00000565362 DIP2CQ9Y2E4 1556 aa17.33■□□□□ 0.37
PDXDC1-211ENST00000565362 FER1L4A9Z1Z3 1794 aa17.32■□□□□ 0.36
PDXDC1-211ENST00000565362 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
PDXDC1-211ENST00000565362 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
PDXDC1-211ENST00000565362 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
PDXDC1-211ENST00000565362 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
PDXDC1-211ENST00000565362 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
PDXDC1-211ENST00000565362 AGLP35573 1532 aa17.29■□□□□ 0.36
PDXDC1-211ENST00000565362 SAMD9LQ8IVG5 1584 aa17.28■□□□□ 0.36
PDXDC1-211ENST00000565362 ZNF777Q9ULD5 760 aaPredicted RBP17.28■□□□□ 0.36
PDXDC1-211ENST00000565362 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
PDXDC1-211ENST00000565362 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
PDXDC1-211ENST00000565362 KIDINS220Q9ULH0 1771 aa17.27■□□□□ 0.35
PDXDC1-211ENST00000565362 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.35
PDXDC1-211ENST00000565362 HSPA2P54652 639 aa17.26■□□□□ 0.35
PDXDC1-211ENST00000565362 CFDP1Q9UEE9 299 aaPredicted RBP17.26■□□□□ 0.35
PDXDC1-211ENST00000565362 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
PDXDC1-211ENST00000565362 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDXDC1-211ENST00000565362 SYCP2Q9BX26 1530 aa17.25■□□□□ 0.35
PDXDC1-211ENST00000565362 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
PDXDC1-211ENST00000565362 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
PDXDC1-211ENST00000565362 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
PDXDC1-211ENST00000565362 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
PDXDC1-211ENST00000565362 SETD1BQ9UPS6 1966 aaKnown RBP17.19■□□□□ 0.34
PDXDC1-211ENST00000565362 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
PDXDC1-211ENST00000565362 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
PDXDC1-211ENST00000565362 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
PDXDC1-211ENST00000565362 FBXO41Q8TF61 875 aa17.17■□□□□ 0.34
PDXDC1-211ENST00000565362 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
PDXDC1-211ENST00000565362 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
PDXDC1-211ENST00000565362 INO80Q9ULG1 1556 aaPredicted RBP17.16■□□□□ 0.34
PDXDC1-211ENST00000565362 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
PDXDC1-211ENST00000565362 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
PDXDC1-211ENST00000565362 UHRF1BP1Q6BDS2 1440 aa17.15■□□□□ 0.34
PDXDC1-211ENST00000565362 PLXNC1O60486 1568 aa17.15■□□□□ 0.34
PDXDC1-211ENST00000565362 C3P01024 1663 aa17.14■□□□□ 0.33
PDXDC1-211ENST00000565362 A2MP01023 1474 aa17.14■□□□□ 0.33
PDXDC1-211ENST00000565362 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
PDXDC1-211ENST00000565362 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
PDXDC1-211ENST00000565362 RTEL1-TNFRSF6BF6WH68 1400 aa17.12■□□□□ 0.33
PDXDC1-211ENST00000565362 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
PDXDC1-211ENST00000565362 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
PDXDC1-211ENST00000565362 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
PDXDC1-211ENST00000565362 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
PDXDC1-211ENST00000565362 MROH2AA6NES4 1674 aa17.08■□□□□ 0.32
PDXDC1-211ENST00000565362 NPATQ14207 1427 aa17.08■□□□□ 0.32
PDXDC1-211ENST00000565362 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
PDXDC1-211ENST00000565362 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
PDXDC1-211ENST00000565362 STRCQ7RTU9 1775 aa17.07■□□□□ 0.32
PDXDC1-211ENST00000565362 ADGBQ8N7X0 1667 aa17.07■□□□□ 0.32
PDXDC1-211ENST00000565362 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
PDXDC1-211ENST00000565362 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
PDXDC1-211ENST00000565362 GGT6Q6P531 493 aa17.06■□□□□ 0.32
PDXDC1-211ENST00000565362 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
PDXDC1-211ENST00000565362 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
PDXDC1-211ENST00000565362 CERKQ8TCT0 537 aa17.04■□□□□ 0.32
PDXDC1-211ENST00000565362 PTPRTO14522 1441 aa17.03■□□□□ 0.32
PDXDC1-211ENST00000565362 KANK4Q5T7N3 995 aaPredicted RBP17.02■□□□□ 0.32
PDXDC1-211ENST00000565362 PTPRKQ15262 1439 aa17.02■□□□□ 0.31
PDXDC1-211ENST00000565362 ARHGEF5Q12774 1597 aa17.02■□□□□ 0.31
PDXDC1-211ENST00000565362 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
PDXDC1-211ENST00000565362 NCOA1Q15788 1441 aa17■□□□□ 0.31
PDXDC1-211ENST00000565362 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
PDXDC1-211ENST00000565362 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
PDXDC1-211ENST00000565362 KIF3BO15066 747 aa16.98■□□□□ 0.31
PDXDC1-211ENST00000565362 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
PDXDC1-211ENST00000565362 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.3
PDXDC1-211ENST00000565362 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.3
PDXDC1-211ENST00000565362 CAMSAP1Q5T5Y3 1602 aa16.95■□□□□ 0.3
PDXDC1-211ENST00000565362 MAST1Q9Y2H9 1570 aa16.94■□□□□ 0.3
PDXDC1-211ENST00000565362 MYO3AQ8NEV4 1616 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms