RNA–Protein interactions for RNA: ENST00000565243.2

RNPS1-213, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 2

Gene RNPS1, Length 3,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-213ENST00000565243 WDR62O43379 1518 aa16.7■□□□□ 0.26
RNPS1-213ENST00000565243 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
RNPS1-213ENST00000565243 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
RNPS1-213ENST00000565243 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
RNPS1-213ENST00000565243 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
RNPS1-213ENST00000565243 ANKRD30BQ9BXX2 1392 aa16.67■□□□□ 0.26
RNPS1-213ENST00000565243 BCORL1Q5H9F3 1711 aa16.67■□□□□ 0.26
RNPS1-213ENST00000565243 ARID3CA6NKF2 412 aa16.67■□□□□ 0.26
RNPS1-213ENST00000565243 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
RNPS1-213ENST00000565243 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
RNPS1-213ENST00000565243 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
RNPS1-213ENST00000565243 IQGAP2Q13576 1575 aa16.65■□□□□ 0.26
RNPS1-213ENST00000565243 KIF7Q2M1P5 1343 aa16.65■□□□□ 0.26
RNPS1-213ENST00000565243 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.25
RNPS1-213ENST00000565243 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
RNPS1-213ENST00000565243 DAPK1P53355 1430 aa16.63■□□□□ 0.25
RNPS1-213ENST00000565243 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
RNPS1-213ENST00000565243 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
RNPS1-213ENST00000565243 MRS2Q9HD23 443 aa16.62■□□□□ 0.25
RNPS1-213ENST00000565243 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
RNPS1-213ENST00000565243 ZNF644Q9H582 1327 aaPredicted RBP16.61■□□□□ 0.25
RNPS1-213ENST00000565243 ABCC5O15440 1437 aa16.61■□□□□ 0.25
RNPS1-213ENST00000565243 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
RNPS1-213ENST00000565243 MBD5Q9P267 1494 aa16.58■□□□□ 0.24
RNPS1-213ENST00000565243 PZPP20742 1482 aa16.58■□□□□ 0.24
RNPS1-213ENST00000565243 ERICH6BQ5W0A0 696 aa16.57■□□□□ 0.24
RNPS1-213ENST00000565243 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
RNPS1-213ENST00000565243 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
RNPS1-213ENST00000565243 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
RNPS1-213ENST00000565243 KDM5CP41229 1560 aa16.53■□□□□ 0.24
RNPS1-213ENST00000565243 DISP1Q96F81 1524 aa16.52■□□□□ 0.24
RNPS1-213ENST00000565243 KIAA0556O60303 1618 aa16.51■□□□□ 0.23
RNPS1-213ENST00000565243 SMG6Q86US8 1419 aaKnown RBP16.5■□□□□ 0.23
RNPS1-213ENST00000565243 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
RNPS1-213ENST00000565243 KIF14Q15058 1648 aa16.5■□□□□ 0.23
RNPS1-213ENST00000565243 CROCC2H7BZ55 1655 aa16.49■□□□□ 0.23
RNPS1-213ENST00000565243 ADGBQ8N7X0 1667 aa16.49■□□□□ 0.23
RNPS1-213ENST00000565243 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
RNPS1-213ENST00000565243 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
RNPS1-213ENST00000565243 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
RNPS1-213ENST00000565243 RAPGEF6Q8TEU7 1601 aa16.48■□□□□ 0.23
RNPS1-213ENST00000565243 RNF123Q5XPI4 1314 aa16.48■□□□□ 0.23
RNPS1-213ENST00000565243 CAMSAP2Q08AD1 1489 aa16.46■□□□□ 0.23
RNPS1-213ENST00000565243 USP47Q96K76 1375 aa16.45■□□□□ 0.22
RNPS1-213ENST00000565243 ZNF608Q9ULD9 1512 aaPredicted RBP16.44■□□□□ 0.22
RNPS1-213ENST00000565243 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
RNPS1-213ENST00000565243 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
RNPS1-213ENST00000565243 NUDCQ9Y266 331 aa16.42■□□□□ 0.22
RNPS1-213ENST00000565243 E9PCH4 1651 aa16.42■□□□□ 0.22
RNPS1-213ENST00000565243 KIAA1107Q9UPP5 1409 aa16.4■□□□□ 0.22
RNPS1-213ENST00000565243 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
RNPS1-213ENST00000565243 ITSN2Q9NZM3 1697 aa16.39■□□□□ 0.21
RNPS1-213ENST00000565243 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
RNPS1-213ENST00000565243 ZNF326Q5BKZ1 582 aaKnown RBP16.39■□□□□ 0.21
RNPS1-213ENST00000565243 ADCY10Q96PN6 1610 aa16.38■□□□□ 0.21
RNPS1-213ENST00000565243 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
RNPS1-213ENST00000565243 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
RNPS1-213ENST00000565243 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
RNPS1-213ENST00000565243 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
RNPS1-213ENST00000565243 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
RNPS1-213ENST00000565243 KIAA0586Q9BVV6 1533 aa16.36■□□□□ 0.21
RNPS1-213ENST00000565243 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
RNPS1-213ENST00000565243 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
RNPS1-213ENST00000565243 PKD2Q13563 968 aa16.34■□□□□ 0.21
RNPS1-213ENST00000565243 UHRF1BP1Q6BDS2 1440 aa16.34■□□□□ 0.21
RNPS1-213ENST00000565243 NBR1Q14596 966 aa16.34■□□□□ 0.21
RNPS1-213ENST00000565243 LRPPRCP42704 1394 aaKnown RBP16.34■□□□□ 0.21
RNPS1-213ENST00000565243 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
RNPS1-213ENST00000565243 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
RNPS1-213ENST00000565243 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
RNPS1-213ENST00000565243 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
RNPS1-213ENST00000565243 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
RNPS1-213ENST00000565243 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
RNPS1-213ENST00000565243 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
RNPS1-213ENST00000565243 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
RNPS1-213ENST00000565243 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
RNPS1-213ENST00000565243 ARHGEF12Q9NZN5 1544 aa16.27■□□□□ 0.19
RNPS1-213ENST00000565243 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
RNPS1-213ENST00000565243 KDM5DQ9BY66 1539 aa16.26■□□□□ 0.19
RNPS1-213ENST00000565243 IPO9Q96P70 1041 aaKnown RBP16.25■□□□□ 0.19
RNPS1-213ENST00000565243 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
RNPS1-213ENST00000565243 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
RNPS1-213ENST00000565243 TRPM1Q7Z4N2 1603 aa16.24■□□□□ 0.19
RNPS1-213ENST00000565243 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
RNPS1-213ENST00000565243 TMC1Q8TDI8 760 aa16.24■□□□□ 0.19
RNPS1-213ENST00000565243 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
RNPS1-213ENST00000565243 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
RNPS1-213ENST00000565243 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
RNPS1-213ENST00000565243 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
RNPS1-213ENST00000565243 RRP1P56182 461 aaKnown RBP16.22■□□□□ 0.19
RNPS1-213ENST00000565243 NUP155O75694 1391 aa16.22■□□□□ 0.19
RNPS1-213ENST00000565243 BRD4O60885 1362 aaPredicted RBP16.21■□□□□ 0.19
RNPS1-213ENST00000565243 ROCK2O75116 1388 aaKnown RBP16.21■□□□□ 0.19
RNPS1-213ENST00000565243 KDM2AQ9Y2K7 1162 aa16.21■□□□□ 0.19
RNPS1-213ENST00000565243 C9orf84Q5VXU9 1444 aa16.21■□□□□ 0.19
RNPS1-213ENST00000565243 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.19
RNPS1-213ENST00000565243 PTPRGP23470 1445 aa16.21■□□□□ 0.19
RNPS1-213ENST00000565243 SKAP1Q86WV1 359 aa16.21■□□□□ 0.18
RNPS1-213ENST00000565243 ABCA8O94911 1581 aa16.2■□□□□ 0.18
RNPS1-213ENST00000565243 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms