RNA–Protein interactions for RNA: ENST00000564647.5

RPL4-207, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-207ENST00000564647 SLAIN1Q8ND83 568 aa13.9□□□□□ -0.18
RPL4-207ENST00000564647 MS4A4AQ96JQ5 239 aa13.83□□□□□ -0.2
RPL4-207ENST00000564647 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
RPL4-207ENST00000564647 BOLA1Q9Y3E2 137 aa13.82□□□□□ -0.2
RPL4-207ENST00000564647 NBR1Q14596 966 aa13.74□□□□□ -0.21
RPL4-207ENST00000564647 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
RPL4-207ENST00000564647 WDR70Q9NW82 654 aa13.73□□□□□ -0.21
RPL4-207ENST00000564647 SNPHO15079 494 aa13.72□□□□□ -0.21
RPL4-207ENST00000564647 MICALL2Q8IY33 904 aa13.69□□□□□ -0.22
RPL4-207ENST00000564647 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
RPL4-207ENST00000564647 POTEMA6NI47 508 aa13.67□□□□□ -0.22
RPL4-207ENST00000564647 TMEM121BQ9BXQ6 578 aaPredicted RBP13.67□□□□□ -0.22
RPL4-207ENST00000564647 POTEGQ6S5H5 508 aa13.66□□□□□ -0.22
RPL4-207ENST00000564647 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
RPL4-207ENST00000564647 KCNV2Q8TDN2 545 aa13.64□□□□□ -0.23
RPL4-207ENST00000564647 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
RPL4-207ENST00000564647 LCE2DQ5TA82 110 aaPredicted RBP13.62□□□□□ -0.23
RPL4-207ENST00000564647 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
RPL4-207ENST00000564647 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
RPL4-207ENST00000564647 ST18O60284 1047 aa13.58□□□□□ -0.24
RPL4-207ENST00000564647 PDE4AP27815 886 aa13.57□□□□□ -0.24
RPL4-207ENST00000564647 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
RPL4-207ENST00000564647 E2F4Q16254 413 aa13.54□□□□□ -0.24
RPL4-207ENST00000564647 MFSD10Q14728 455 aa13.52□□□□□ -0.25
RPL4-207ENST00000564647 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
RPL4-207ENST00000564647 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
RPL4-207ENST00000564647 TMEM92Q6UXU6 159 aa13.49□□□□□ -0.25
RPL4-207ENST00000564647 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
RPL4-207ENST00000564647 ZNF710Q8N1W2 664 aa13.48□□□□□ -0.25
RPL4-207ENST00000564647 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
RPL4-207ENST00000564647 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
RPL4-207ENST00000564647 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
RPL4-207ENST00000564647 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
RPL4-207ENST00000564647 EMP3P54852 163 aa13.43□□□□□ -0.26
RPL4-207ENST00000564647 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
RPL4-207ENST00000564647 TMC2Q8TDI7 906 aa13.41□□□□□ -0.26
RPL4-207ENST00000564647 MARVELD3Q96A59 401 aa13.41□□□□□ -0.26
RPL4-207ENST00000564647 CAMK2BQ13554 666 aa13.39□□□□□ -0.27
RPL4-207ENST00000564647 DSG2Q14126 1118 aa13.38□□□□□ -0.27
RPL4-207ENST00000564647 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
RPL4-207ENST00000564647 SEMA3EO15041 775 aa13.36□□□□□ -0.27
RPL4-207ENST00000564647 ZSWIM6Q9HCJ5 1215 aa13.36□□□□□ -0.27
RPL4-207ENST00000564647 KIF3CO14782 793 aa13.35□□□□□ -0.27
RPL4-207ENST00000564647 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
RPL4-207ENST00000564647 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
RPL4-207ENST00000564647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
RPL4-207ENST00000564647 FOXK1P85037 733 aa13.32□□□□□ -0.28
RPL4-207ENST00000564647 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
RPL4-207ENST00000564647 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
RPL4-207ENST00000564647 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
RPL4-207ENST00000564647 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
RPL4-207ENST00000564647 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
RPL4-207ENST00000564647 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
RPL4-207ENST00000564647 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
RPL4-207ENST00000564647 HS3ST6Q96QI5 342 aa13.27□□□□□ -0.29
RPL4-207ENST00000564647 ERBB3P21860 1342 aa13.25□□□□□ -0.29
RPL4-207ENST00000564647 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
RPL4-207ENST00000564647 DPYSL4O14531 572 aa13.25□□□□□ -0.29
RPL4-207ENST00000564647 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
RPL4-207ENST00000564647 ARSIQ5FYB1 569 aa13.21□□□□□ -0.29
RPL4-207ENST00000564647 SLC34A2O95436 690 aa13.19□□□□□ -0.3
RPL4-207ENST00000564647 MLLT3P42568 568 aaPredicted RBP13.18□□□□□ -0.3
RPL4-207ENST00000564647 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
RPL4-207ENST00000564647 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
RPL4-207ENST00000564647 PDIA6Q15084 440 aa13.15□□□□□ -0.3
RPL4-207ENST00000564647 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPL4-207ENST00000564647 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
RPL4-207ENST00000564647 KHSRPQ92945 711 aaKnown RBP eCLIP13.14□□□□□ -0.312e-8■■■■□ 20.3
RPL4-207ENST00000564647 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
RPL4-207ENST00000564647 SPDYE16A6NNV3 312 aaPredicted RBP13.13□□□□□ -0.31
RPL4-207ENST00000564647 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
RPL4-207ENST00000564647 NUDT7P0C024 238 aa13.12□□□□□ -0.31
RPL4-207ENST00000564647 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
RPL4-207ENST00000564647 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
RPL4-207ENST00000564647 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
RPL4-207ENST00000564647 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
RPL4-207ENST00000564647 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
RPL4-207ENST00000564647 TBC1D12O60347 775 aa13.08□□□□□ -0.32
RPL4-207ENST00000564647 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
RPL4-207ENST00000564647 KRTAP3-3Q9BYR6 98 aa13.06□□□□□ -0.32
RPL4-207ENST00000564647 KRTAP3-2Q9BYR7 98 aa13.06□□□□□ -0.32
RPL4-207ENST00000564647 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
RPL4-207ENST00000564647 LHX6Q9UPM6 363 aa13.03□□□□□ -0.32
RPL4-207ENST00000564647 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
RPL4-207ENST00000564647 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
RPL4-207ENST00000564647 EVI5O60447 810 aa12.99□□□□□ -0.33
RPL4-207ENST00000564647 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
RPL4-207ENST00000564647 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
RPL4-207ENST00000564647 ZMYND10O75800 440 aa12.98□□□□□ -0.33
RPL4-207ENST00000564647 DDX12PQ92771 950 aa12.97□□□□□ -0.33
RPL4-207ENST00000564647 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
RPL4-207ENST00000564647 PBX2P40425 430 aa12.95□□□□□ -0.34
RPL4-207ENST00000564647 PTGER2P43116 358 aa12.94□□□□□ -0.34
RPL4-207ENST00000564647 OSBPP22059 807 aa12.93□□□□□ -0.34
RPL4-207ENST00000564647 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
RPL4-207ENST00000564647 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
RPL4-207ENST00000564647 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
RPL4-207ENST00000564647 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
RPL4-207ENST00000564647 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
RPL4-207ENST00000564647 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms