RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 IFT140Q96RY7 1462 aa8.81□□□□□ -1
HERPUD1-207ENST00000563781 SOGA1O94964 1423 aa8.8□□□□□ -1
HERPUD1-207ENST00000563781 BMP2KQ9NSY1 1161 aaPredicted RBP8.8□□□□□ -1
HERPUD1-207ENST00000563781 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
HERPUD1-207ENST00000563781 TTLL13PA6NNM8 815 aa8.79□□□□□ -1
HERPUD1-207ENST00000563781 ABCA10Q8WWZ4 1543 aa8.78□□□□□ -1
HERPUD1-207ENST00000563781 ZNF608Q9ULD9 1512 aaPredicted RBP8.77□□□□□ -1.01
HERPUD1-207ENST00000563781 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
HERPUD1-207ENST00000563781 ATMINO43313 823 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-207ENST00000563781 NKX1-1Q15270 411 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-207ENST00000563781 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-207ENST00000563781 BCANQ96GW7 911 aa8.75□□□□□ -1.01
HERPUD1-207ENST00000563781 WDR97A6NE52 1622 aa8.75□□□□□ -1.01
HERPUD1-207ENST00000563781 TDRD9Q8NDG6 1382 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-207ENST00000563781 ATN1P54259 1190 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-207ENST00000563781 DCBLD2Q96PD2 775 aa8.74□□□□□ -1.01
HERPUD1-207ENST00000563781 AQRO60306 1485 aaKnown RBP eCLIP8.73□□□□□ -1.011e-6■■■■■ 39.5
HERPUD1-207ENST00000563781 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
HERPUD1-207ENST00000563781 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.73□□□□□ -1.01
HERPUD1-207ENST00000563781 TRIM35Q9UPQ4 493 aa8.72□□□□□ -1.01
HERPUD1-207ENST00000563781 EIF4G3O43432 1585 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-207ENST00000563781 ABCA5Q8WWZ7 1642 aa8.72□□□□□ -1.01
HERPUD1-207ENST00000563781 POTEIP0CG38 1075 aa8.71□□□□□ -1.02
HERPUD1-207ENST00000563781 GAPVD1Q14C86 1478 aa8.7□□□□□ -1.02
HERPUD1-207ENST00000563781 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
HERPUD1-207ENST00000563781 SOX12O15370 315 aa8.7□□□□□ -1.02
HERPUD1-207ENST00000563781 KIF27Q86VH2 1401 aa8.7□□□□□ -1.02
HERPUD1-207ENST00000563781 GOLGA2Q08379 1002 aa8.69□□□□□ -1.02
HERPUD1-207ENST00000563781 MKRN3Q13064 507 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-207ENST00000563781 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-207ENST00000563781 GRIN2BQ13224 1484 aa8.69□□□□□ -1.02
HERPUD1-207ENST00000563781 SPRYD3Q8NCJ5 442 aa8.68□□□□□ -1.02
HERPUD1-207ENST00000563781 MFRPQ9BY79 579 aa8.68□□□□□ -1.02
HERPUD1-207ENST00000563781 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
HERPUD1-207ENST00000563781 IGF1RP08069 1367 aa8.67□□□□□ -1.02
HERPUD1-207ENST00000563781 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
HERPUD1-207ENST00000563781 SNAPC4Q5SXM2 1469 aa8.66□□□□□ -1.02
HERPUD1-207ENST00000563781 PHF8Q9UPP1 1060 aa8.66□□□□□ -1.02
HERPUD1-207ENST00000563781 ERICH3Q5RHP9 1530 aa8.65□□□□□ -1.02
HERPUD1-207ENST00000563781 FBXO22Q8NEZ5 403 aa8.65□□□□□ -1.02
HERPUD1-207ENST00000563781 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
HERPUD1-207ENST00000563781 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-207ENST00000563781 EEA1Q15075 1411 aa8.64□□□□□ -1.03
HERPUD1-207ENST00000563781 NLRP6P59044 892 aa8.64□□□□□ -1.03
HERPUD1-207ENST00000563781 IER5LQ5T953 404 aa8.64□□□□□ -1.03
HERPUD1-207ENST00000563781 ILDR1Q86SU0 546 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-207ENST00000563781 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-207ENST00000563781 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
HERPUD1-207ENST00000563781 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
HERPUD1-207ENST00000563781 ADAMTS12P58397 1594 aa8.63□□□□□ -1.03
HERPUD1-207ENST00000563781 FHAD1B1AJZ9 1412 aa8.63□□□□□ -1.03
HERPUD1-207ENST00000563781 IRX5P78411 483 aaPredicted RBP8.62□□□□□ -1.03
HERPUD1-207ENST00000563781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.03
HERPUD1-207ENST00000563781 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
HERPUD1-207ENST00000563781 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
HERPUD1-207ENST00000563781 FAM9AQ8IZU1 332 aaPredicted RBP8.61□□□□□ -1.03
HERPUD1-207ENST00000563781 SLC39A7Q92504 469 aa8.61□□□□□ -1.03
HERPUD1-207ENST00000563781 MS4A4AQ96JQ5 239 aa8.61□□□□□ -1.03
HERPUD1-207ENST00000563781 PRXQ9BXM0 1461 aa8.61□□□□□ -1.03
HERPUD1-207ENST00000563781 CARMIL1Q5VZK9 1371 aa8.61□□□□□ -1.03
HERPUD1-207ENST00000563781 SYNJ2O15056 1496 aa8.6□□□□□ -1.03
HERPUD1-207ENST00000563781 C7P10643 843 aa8.6□□□□□ -1.03
HERPUD1-207ENST00000563781 OCEL1Q9H607 264 aa8.59□□□□□ -1.03
HERPUD1-207ENST00000563781 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-207ENST00000563781 CUL7Q14999 1698 aa8.58□□□□□ -1.04
HERPUD1-207ENST00000563781 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
HERPUD1-207ENST00000563781 POTEFA5A3E0 1075 aa8.57□□□□□ -1.04
HERPUD1-207ENST00000563781 PPP1R37O75864 691 aa8.57□□□□□ -1.04
HERPUD1-207ENST00000563781 METRNQ9UJH8 293 aa8.57□□□□□ -1.04
HERPUD1-207ENST00000563781 COLQQ9Y215 455 aaPredicted RBP8.57□□□□□ -1.04
HERPUD1-207ENST00000563781 RAPGEF2Q9Y4G8 1499 aa8.57□□□□□ -1.04
HERPUD1-207ENST00000563781 PLCG2P16885 1265 aa8.56□□□□□ -1.04
HERPUD1-207ENST00000563781 CHMP7Q8WUX9 453 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-207ENST00000563781 SEC24BO95487 1268 aa8.55□□□□□ -1.04
HERPUD1-207ENST00000563781 DPY19L2Q6NUT2 758 aa8.55□□□□□ -1.04
HERPUD1-207ENST00000563781 NUP160Q12769 1436 aa8.54□□□□□ -1.04
HERPUD1-207ENST00000563781 KIF21BO75037 1637 aa8.54□□□□□ -1.04
HERPUD1-207ENST00000563781 CEP170Q5SW79 1584 aa8.53□□□□□ -1.04
HERPUD1-207ENST00000563781 CHD1O14646 1710 aa8.53□□□□□ -1.04
HERPUD1-207ENST00000563781 TSHZ2Q9NRE2 1034 aa8.52□□□□□ -1.05
HERPUD1-207ENST00000563781 GOLGA3Q08378 1498 aa8.51□□□□□ -1.05
HERPUD1-207ENST00000563781 CLASP1Q7Z460 1538 aa8.51□□□□□ -1.05
HERPUD1-207ENST00000563781 KIAA0586Q9BVV6 1533 aa8.49□□□□□ -1.05
HERPUD1-207ENST00000563781 L3MBTL3Q96JM7 780 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-207ENST00000563781 TMEM121BQ9BXQ6 578 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-207ENST00000563781 BOLA1Q9Y3E2 137 aa8.48□□□□□ -1.05
HERPUD1-207ENST00000563781 LOC105371045A0A1W2PR82 267 aa8.46□□□□□ -1.06
HERPUD1-207ENST00000563781 MICALL2Q8IY33 904 aa8.46□□□□□ -1.06
HERPUD1-207ENST00000563781 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
HERPUD1-207ENST00000563781 CADPS2Q86UW7 1296 aa8.45□□□□□ -1.06
HERPUD1-207ENST00000563781 TNIKQ9UKE5 1360 aa8.45□□□□□ -1.06
HERPUD1-207ENST00000563781 IQGAP2Q13576 1575 aa8.44□□□□□ -1.06
HERPUD1-207ENST00000563781 POTEB2H3BUK9 544 aa8.44□□□□□ -1.06
HERPUD1-207ENST00000563781 JPH4Q96JJ6 628 aa8.44□□□□□ -1.06
HERPUD1-207ENST00000563781 SHROOM2Q13796 1616 aa8.43□□□□□ -1.06
HERPUD1-207ENST00000563781 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-207ENST00000563781 UGGT2Q9NYU1 1516 aa8.43□□□□□ -1.06
HERPUD1-207ENST00000563781 G3V3G9 751 aa8.42□□□□□ -1.06
HERPUD1-207ENST00000563781 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
HERPUD1-207ENST00000563781 CTTNBP2Q8WZ74 1663 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms