RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 ARHGEF12Q9NZN5 1544 aa31.13■■■□□ 2.57
E4F1-203ENST00000563643 SAMD9Q5K651 1589 aa31.12■■■□□ 2.57
E4F1-203ENST00000563643 HECW1Q76N89 1606 aa31.09■■■□□ 2.57
E4F1-203ENST00000563643 CEBPAP49715 358 aaPredicted RBP31.08■■■□□ 2.57
E4F1-203ENST00000563643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.07■■■□□ 2.56
E4F1-203ENST00000563643 PLEKHD1A6NEE1 506 aa31.05■■■□□ 2.56
E4F1-203ENST00000563643 UHRF1BP1Q6BDS2 1440 aa31.05■■■□□ 2.56
E4F1-203ENST00000563643 PTPRTO14522 1441 aa31.02■■■□□ 2.56
E4F1-203ENST00000563643 ATP10AO60312 1499 aa31■■■□□ 2.55
E4F1-203ENST00000563643 C9orf84Q5VXU9 1444 aa30.99■■■□□ 2.55
E4F1-203ENST00000563643 LTBP4Q8N2S1 1624 aa30.98■■■□□ 2.55
E4F1-203ENST00000563643 IQSEC2Q5JU85 1478 aa30.97■■■□□ 2.55
E4F1-203ENST00000563643 SCAPERQ9BY12 1400 aa30.97■■■□□ 2.55
E4F1-203ENST00000563643 PLCH2O75038 1416 aa30.86■■■□□ 2.53
E4F1-203ENST00000563643 SETD1BQ9UPS6 1966 aaKnown RBP30.85■■■□□ 2.53
E4F1-203ENST00000563643 RANGAP1P46060 587 aaPredicted RBP30.78■■■□□ 2.52
E4F1-203ENST00000563643 NCOA1Q15788 1441 aa30.78■■■□□ 2.52
E4F1-203ENST00000563643 C3P01024 1663 aa30.75■■■□□ 2.51
E4F1-203ENST00000563643 ZNF518AQ6AHZ1 1483 aa30.75■■■□□ 2.51
E4F1-203ENST00000563643 CDK13Q14004 1512 aaKnown RBP30.73■■■□□ 2.51
E4F1-203ENST00000563643 EFCAB2Q5VUJ9 269 aa30.72■■■□□ 2.51
E4F1-203ENST00000563643 TRAPPC8Q9Y2L5 1435 aa30.72■■■□□ 2.51
E4F1-203ENST00000563643 UBAP1LF5GYI3 381 aa30.71■■■□□ 2.51
E4F1-203ENST00000563643 KDM5CP41229 1560 aa30.7■■■□□ 2.5
E4F1-203ENST00000563643 DIP2CQ9Y2E4 1556 aa30.69■■■□□ 2.5
E4F1-203ENST00000563643 REREQ9P2R6 1566 aa30.68■■■□□ 2.5
E4F1-203ENST00000563643 MYO5CQ9NQX4 1742 aa30.65■■■□□ 2.5
E4F1-203ENST00000563643 AFAP1Q8N556 730 aa30.65■■■□□ 2.5
E4F1-203ENST00000563643 CSRNP3Q8WYN3 585 aa30.64■■■□□ 2.5
E4F1-203ENST00000563643 ESF1Q9H501 851 aaKnown RBP30.64■■■□□ 2.5
E4F1-203ENST00000563643 ZNF335Q9H4Z2 1342 aaPredicted RBP30.64■■■□□ 2.5
E4F1-203ENST00000563643 MYT1LQ9UL68 1186 aa30.63■■■□□ 2.49
E4F1-203ENST00000563643 CAMSAP1Q5T5Y3 1602 aa30.62■■■□□ 2.49
E4F1-203ENST00000563643 ABCA6Q8N139 1617 aa30.59■■■□□ 2.49
E4F1-203ENST00000563643 AGLP35573 1532 aa30.59■■■□□ 2.49
E4F1-203ENST00000563643 MED1Q15648 1581 aaPredicted RBP30.57■■■□□ 2.48
E4F1-203ENST00000563643 ARHGAP5Q13017 1502 aa30.56■■■□□ 2.48
E4F1-203ENST00000563643 CNTLNQ9NXG0 1405 aa30.56■■■□□ 2.48
E4F1-203ENST00000563643 MLH3Q9UHC1 1453 aa30.54■■■□□ 2.48
E4F1-203ENST00000563643 NCKAP5LQ9HCH0 1330 aa30.53■■■□□ 2.48
E4F1-203ENST00000563643 KIF14Q15058 1648 aa30.51■■■□□ 2.48
E4F1-203ENST00000563643 NPATQ14207 1427 aa30.51■■■□□ 2.47
E4F1-203ENST00000563643 HSPA1LP34931 641 aa30.46■■■□□ 2.47
E4F1-203ENST00000563643 PLA2R1Q13018 1463 aa30.44■■■□□ 2.46
E4F1-203ENST00000563643 CDK11AQ9UQ88 783 aaPredicted RBP30.43■■■□□ 2.46
E4F1-203ENST00000563643 PKD2Q13563 968 aa30.42■■■□□ 2.46
E4F1-203ENST00000563643 ATP1B4Q9UN42 357 aaPredicted RBP30.42■■■□□ 2.46
E4F1-203ENST00000563643 SCAF1Q9H7N4 1312 aaKnown RBP30.42■■■□□ 2.46
E4F1-203ENST00000563643 MROH2AA6NES4 1674 aa30.41■■■□□ 2.46
E4F1-203ENST00000563643 TCOF1Q13428 1488 aaKnown RBP30.4■■■□□ 2.46
E4F1-203ENST00000563643 TROQ12816 1431 aaPredicted RBP30.39■■■□□ 2.46
E4F1-203ENST00000563643 ZMYM3Q14202 1370 aa30.38■■■□□ 2.45
E4F1-203ENST00000563643 PIP4K2BP78356 416 aa30.37■■■□□ 2.45
E4F1-203ENST00000563643 ZNF142P52746 1687 aaPredicted RBP30.36■■■□□ 2.45
E4F1-203ENST00000563643 ABCC1P33527 1531 aa30.36■■■□□ 2.45
E4F1-203ENST00000563643 CLIP1P30622 1438 aa30.35■■■□□ 2.45
E4F1-203ENST00000563643 MYO3AQ8NEV4 1616 aa30.35■■■□□ 2.45
E4F1-203ENST00000563643 PPP6R1Q9UPN7 881 aa30.34■■■□□ 2.45
E4F1-203ENST00000563643 KIDINS220Q9ULH0 1771 aa30.33■■■□□ 2.45
E4F1-203ENST00000563643 PHF23Q9BUL5 403 aaPredicted RBP30.33■■■□□ 2.45
E4F1-203ENST00000563643 CDC42BPBQ9Y5S2 1711 aa30.33■■■□□ 2.45
E4F1-203ENST00000563643 CEP170BQ9Y4F5 1589 aaPredicted RBP30.32■■■□□ 2.45
E4F1-203ENST00000563643 FMN1Q68DA7 1419 aa30.32■■■□□ 2.44
E4F1-203ENST00000563643 EEA1Q15075 1411 aa30.3■■■□□ 2.44
E4F1-203ENST00000563643 ITSN2Q9NZM3 1697 aa30.3■■■□□ 2.44
E4F1-203ENST00000563643 TOM1O60784 492 aa30.29■■■□□ 2.44
E4F1-203ENST00000563643 PREX2Q70Z35 1606 aa30.27■■■□□ 2.44
E4F1-203ENST00000563643 SUPT6HQ7KZ85 1726 aaKnown RBP30.27■■■□□ 2.44
E4F1-203ENST00000563643 PTPRKQ15262 1439 aa30.24■■■□□ 2.43
E4F1-203ENST00000563643 CPS1P31327 1500 aa30.22■■■□□ 2.43
E4F1-203ENST00000563643 CLTCQ00610 1675 aaKnown RBP30.22■■■□□ 2.43
E4F1-203ENST00000563643 SAMD9LQ8IVG5 1584 aa30.19■■■□□ 2.42
E4F1-203ENST00000563643 SHANK2Q9UPX8 1470 aa30.15■■■□□ 2.42
E4F1-203ENST00000563643 ARHGAP35Q9NRY4 1499 aa30.14■■■□□ 2.42
E4F1-203ENST00000563643 A2ML1A8K2U0 1454 aa30.12■■■□□ 2.41
E4F1-203ENST00000563643 LRRIQ1Q96JM4 1722 aa30.12■■■□□ 2.41
E4F1-203ENST00000563643 PLXNC1O60486 1568 aa30.11■■■□□ 2.41
E4F1-203ENST00000563643 DNMT1P26358 1616 aaKnown RBP30.11■■■□□ 2.41
E4F1-203ENST00000563643 SPAG9O60271 1321 aaKnown RBP30.1■■■□□ 2.41
E4F1-203ENST00000563643 NEURL4Q96JN8 1562 aa30.1■■■□□ 2.41
E4F1-203ENST00000563643 ALKQ9UM73 1620 aa30.09■■■□□ 2.41
E4F1-203ENST00000563643 SYCP2Q9BX26 1530 aa30.06■■■□□ 2.4
E4F1-203ENST00000563643 POLR1AO95602 1720 aaPredicted RBP30.06■■■□□ 2.4
E4F1-203ENST00000563643 GGT6Q6P531 493 aa30.06■■■□□ 2.4
E4F1-203ENST00000563643 ATP7AQ04656 1500 aa30.06■■■□□ 2.4
E4F1-203ENST00000563643 A2MP01023 1474 aa30.06■■■□□ 2.4
E4F1-203ENST00000563643 CDC42BPAQ5VT25 1732 aa30.05■■■□□ 2.4
E4F1-203ENST00000563643 ZNF777Q9ULD5 760 aaPredicted RBP30.03■■■□□ 2.4
E4F1-203ENST00000563643 VWDEQ8N2E2 1590 aa30.01■■■□□ 2.39
E4F1-203ENST00000563643 INO80Q9ULG1 1556 aaPredicted RBP30■■■□□ 2.39
E4F1-203ENST00000563643 SENP3Q9H4L4 574 aaPredicted RBP30■■■□□ 2.39
E4F1-203ENST00000563643 HNRNPMP52272 730 aaKnown RBP eCLIP29.98■■■□□ 2.39
E4F1-203ENST00000563643 UBTFP17480 764 aaKnown RBP29.97■■■□□ 2.39
E4F1-203ENST00000563643 RGS17Q9UGC6 210 aaPredicted RBP29.97■■■□□ 2.39
E4F1-203ENST00000563643 CCDC18Q5T9S5 1454 aa29.96■■■□□ 2.39
E4F1-203ENST00000563643 EHMT2Q96KQ7 1210 aa29.95■■■□□ 2.39
E4F1-203ENST00000563643 TNRQ92752 1358 aa29.91■■■□□ 2.38
E4F1-203ENST00000563643 ANKLE2Q86XL3 938 aa29.91■■■□□ 2.38
E4F1-203ENST00000563643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.9■■■□□ 2.38
E4F1-203ENST00000563643 KIAA1107Q9UPP5 1409 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms