RNA–Protein interactions for RNA: ENST00000562924.5

NPTN-204, Transcript of neuroplastin, humanhuman

TSL 1 (best) BASIC

Gene NPTN, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-204ENST00000562924 FER1L4A9Z1Z3 1794 aa22.55■■□□□ 1.2
NPTN-204ENST00000562924 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
NPTN-204ENST00000562924 ILDR1Q86SU0 546 aaPredicted RBP22.55■■□□□ 1.2
NPTN-204ENST00000562924 ARID4BQ4LE39 1312 aaPredicted RBP22.54■■□□□ 1.2
NPTN-204ENST00000562924 CDC42BPBQ9Y5S2 1711 aa22.54■■□□□ 1.2
NPTN-204ENST00000562924 TROQ12816 1431 aaPredicted RBP22.53■■□□□ 1.2
NPTN-204ENST00000562924 SCAPERQ9BY12 1400 aa22.52■■□□□ 1.2
NPTN-204ENST00000562924 LMTK3Q96Q04 1460 aa22.5■■□□□ 1.19
NPTN-204ENST00000562924 ATP1B4Q9UN42 357 aaPredicted RBP22.5■■□□□ 1.19
NPTN-204ENST00000562924 PREX2Q70Z35 1606 aa22.49■■□□□ 1.19
NPTN-204ENST00000562924 ARHGAP5Q13017 1502 aa22.48■■□□□ 1.19
NPTN-204ENST00000562924 KDM5CP41229 1560 aa22.48■■□□□ 1.19
NPTN-204ENST00000562924 CLIP1P30622 1438 aa22.47■■□□□ 1.19
NPTN-204ENST00000562924 CDK11AQ9UQ88 783 aaPredicted RBP22.46■■□□□ 1.19
NPTN-204ENST00000562924 CCDC18Q5T9S5 1454 aa22.46■■□□□ 1.19
NPTN-204ENST00000562924 CDC42BPAQ5VT25 1732 aa22.45■■□□□ 1.19
NPTN-204ENST00000562924 CASKIN1Q8WXD9 1431 aa22.45■■□□□ 1.18
NPTN-204ENST00000562924 ITSN2Q9NZM3 1697 aa22.43■■□□□ 1.18
NPTN-204ENST00000562924 ZNF518AQ6AHZ1 1483 aa22.43■■□□□ 1.18
NPTN-204ENST00000562924 EFCAB2Q5VUJ9 269 aa22.43■■□□□ 1.18
NPTN-204ENST00000562924 ARHGEF12Q9NZN5 1544 aa22.42■■□□□ 1.18
NPTN-204ENST00000562924 ATP10AO60312 1499 aa22.42■■□□□ 1.18
NPTN-204ENST00000562924 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
NPTN-204ENST00000562924 DIP2CQ9Y2E4 1556 aa22.41■■□□□ 1.18
NPTN-204ENST00000562924 ABCC1P33527 1531 aa22.4■■□□□ 1.18
NPTN-204ENST00000562924 FYCO1Q9BQS8 1478 aa22.4■■□□□ 1.18
NPTN-204ENST00000562924 ABCA6Q8N139 1617 aa22.39■■□□□ 1.18
NPTN-204ENST00000562924 REREQ9P2R6 1566 aa22.38■■□□□ 1.17
NPTN-204ENST00000562924 PREX1Q8TCU6 1659 aa22.36■■□□□ 1.17
NPTN-204ENST00000562924 MLECQ14165 292 aa22.33■■□□□ 1.17
NPTN-204ENST00000562924 KIDINS220Q9ULH0 1771 aa22.33■■□□□ 1.16
NPTN-204ENST00000562924 MLH3Q9UHC1 1453 aa22.31■■□□□ 1.16
NPTN-204ENST00000562924 AFAP1Q8N556 730 aa22.3■■□□□ 1.16
NPTN-204ENST00000562924 TRAPPC8Q9Y2L5 1435 aa22.29■■□□□ 1.16
NPTN-204ENST00000562924 SAMD9LQ8IVG5 1584 aa22.29■■□□□ 1.16
NPTN-204ENST00000562924 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
NPTN-204ENST00000562924 C3P01024 1663 aa22.27■■□□□ 1.16
NPTN-204ENST00000562924 AGLP35573 1532 aa22.26■■□□□ 1.15
NPTN-204ENST00000562924 HSPA2P54652 639 aa22.25■■□□□ 1.15
NPTN-204ENST00000562924 SETD1BQ9UPS6 1966 aaKnown RBP22.23■■□□□ 1.15
NPTN-204ENST00000562924 SYCP2Q9BX26 1530 aa22.23■■□□□ 1.15
NPTN-204ENST00000562924 GPATCH8Q9UKJ3 1502 aaKnown RBP22.21■■□□□ 1.15
NPTN-204ENST00000562924 FBXO41Q8TF61 875 aa22.2■■□□□ 1.14
NPTN-204ENST00000562924 STRCQ7RTU9 1775 aa22.2■■□□□ 1.14
NPTN-204ENST00000562924 INO80Q9ULG1 1556 aaPredicted RBP22.18■■□□□ 1.14
NPTN-204ENST00000562924 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
NPTN-204ENST00000562924 SUPT6HQ7KZ85 1726 aaKnown RBP22.16■■□□□ 1.14
NPTN-204ENST00000562924 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
NPTN-204ENST00000562924 CEBPAP49715 358 aaPredicted RBP22.15■■□□□ 1.14
NPTN-204ENST00000562924 TIAM1Q13009 1591 aa22.14■■□□□ 1.13
NPTN-204ENST00000562924 ATP7AQ04656 1500 aa22.14■■□□□ 1.13
NPTN-204ENST00000562924 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
NPTN-204ENST00000562924 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
NPTN-204ENST00000562924 UHRF1BP1Q6BDS2 1440 aa22.12■■□□□ 1.13
NPTN-204ENST00000562924 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
NPTN-204ENST00000562924 KIAA1107Q9UPP5 1409 aa22.1■■□□□ 1.13
NPTN-204ENST00000562924 ZNF777Q9ULD5 760 aaPredicted RBP22.09■■□□□ 1.13
NPTN-204ENST00000562924 ADGBQ8N7X0 1667 aa22.09■■□□□ 1.13
NPTN-204ENST00000562924 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.12
NPTN-204ENST00000562924 CLTCQ00610 1675 aaKnown RBP22.07■■□□□ 1.12
NPTN-204ENST00000562924 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
NPTN-204ENST00000562924 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
NPTN-204ENST00000562924 CNTLNQ9NXG0 1405 aa22.06■■□□□ 1.12
NPTN-204ENST00000562924 SPAG9O60271 1321 aaKnown RBP22.05■■□□□ 1.12
NPTN-204ENST00000562924 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.127e-8■■■■■ 30.6
NPTN-204ENST00000562924 CFDP1Q9UEE9 299 aaPredicted RBP22.03■■□□□ 1.12
NPTN-204ENST00000562924 A2MP01023 1474 aa22.02■■□□□ 1.12
NPTN-204ENST00000562924 ZNF142P52746 1687 aaPredicted RBP22.01■■□□□ 1.11
NPTN-204ENST00000562924 MYO3AQ8NEV4 1616 aa21.99■■□□□ 1.11
NPTN-204ENST00000562924 MBD5Q9P267 1494 aa21.99■■□□□ 1.11
NPTN-204ENST00000562924 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
NPTN-204ENST00000562924 NPATQ14207 1427 aa21.98■■□□□ 1.11
NPTN-204ENST00000562924 CERKQ8TCT0 537 aa21.97■■□□□ 1.11
NPTN-204ENST00000562924 ZNF644Q9H582 1327 aaPredicted RBP21.95■■□□□ 1.1
NPTN-204ENST00000562924 PTPRTO14522 1441 aa21.94■■□□□ 1.1
NPTN-204ENST00000562924 NCOA2Q15596 1464 aa21.94■■□□□ 1.1
NPTN-204ENST00000562924 ZMYM3Q14202 1370 aa21.93■■□□□ 1.1
NPTN-204ENST00000562924 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
NPTN-204ENST00000562924 CAMSAP1Q5T5Y3 1602 aa21.93■■□□□ 1.1
NPTN-204ENST00000562924 DMRT2Q9Y5R5 561 aa21.92■■□□□ 1.1
NPTN-204ENST00000562924 CAMSAP2Q08AD1 1489 aa21.91■■□□□ 1.1
NPTN-204ENST00000562924 RTEL1-TNFRSF6BF6WH68 1400 aa21.9■■□□□ 1.1
NPTN-204ENST00000562924 CEP170BQ9Y4F5 1589 aaPredicted RBP21.9■■□□□ 1.1
NPTN-204ENST00000562924 CCDC141Q6ZP82 1450 aa21.9■■□□□ 1.1
NPTN-204ENST00000562924 PTPRKQ15262 1439 aa21.89■■□□□ 1.09
NPTN-204ENST00000562924 LTBP4Q8N2S1 1624 aa21.88■■□□□ 1.09
NPTN-204ENST00000562924 ARHGEF5Q12774 1597 aa21.88■■□□□ 1.09
NPTN-204ENST00000562924 VPS8Q8N3P4 1428 aa21.84■■□□□ 1.09
NPTN-204ENST00000562924 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
NPTN-204ENST00000562924 GGT6Q6P531 493 aa21.83■■□□□ 1.09
NPTN-204ENST00000562924 FAM135AQ9P2D6 1515 aa21.83■■□□□ 1.09
NPTN-204ENST00000562924 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.08
NPTN-204ENST00000562924 DHX29Q7Z478 1369 aaKnown RBP21.82■■□□□ 1.08
NPTN-204ENST00000562924 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
NPTN-204ENST00000562924 KDM5DQ9BY66 1539 aa21.8■■□□□ 1.08
NPTN-204ENST00000562924 POLR1AO95602 1720 aaPredicted RBP21.8■■□□□ 1.08
NPTN-204ENST00000562924 PPP6R1Q9UPN7 881 aa21.8■■□□□ 1.08
NPTN-204ENST00000562924 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
NPTN-204ENST00000562924 TCOF1Q13428 1488 aaKnown RBP21.79■■□□□ 1.08
NPTN-204ENST00000562924 MAST1Q9Y2H9 1570 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms