RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 EFCAB2Q5VUJ9 269 aa27.25■■□□□ 1.95
TNRC6A-209ENST00000562829 BCORL1Q5H9F3 1711 aa27.24■■□□□ 1.95
TNRC6A-209ENST00000562829 ZFYVE16Q7Z3T8 1539 aa27.23■■□□□ 1.95
TNRC6A-209ENST00000562829 ARHGAP5Q13017 1502 aa27.22■■□□□ 1.95
TNRC6A-209ENST00000562829 POGZQ7Z3K3 1410 aa27.22■■□□□ 1.95
TNRC6A-209ENST00000562829 FYCO1Q9BQS8 1478 aa27.2■■□□□ 1.95
TNRC6A-209ENST00000562829 YEATS2Q9ULM3 1422 aa27.2■■□□□ 1.94
TNRC6A-209ENST00000562829 PTPRMP28827 1452 aa27.19■■□□□ 1.94
TNRC6A-209ENST00000562829 MAGI2Q86UL8 1455 aa27.19■■□□□ 1.94
TNRC6A-209ENST00000562829 MADDQ8WXG6 1647 aa27.18■■□□□ 1.94
TNRC6A-209ENST00000562829 CDC42BPBQ9Y5S2 1711 aa27.11■■□□□ 1.93
TNRC6A-209ENST00000562829 PREX2Q70Z35 1606 aa27.11■■□□□ 1.93
TNRC6A-209ENST00000562829 ZNF518AQ6AHZ1 1483 aa27.1■■□□□ 1.93
TNRC6A-209ENST00000562829 RIMS1Q86UR5 1692 aaKnown RBP27.1■■□□□ 1.93
TNRC6A-209ENST00000562829 SIGLEC1Q9BZZ2 1709 aa27.09■■□□□ 1.93
TNRC6A-209ENST00000562829 MYT1LQ9UL68 1186 aa27.08■■□□□ 1.93
TNRC6A-209ENST00000562829 MLECQ14165 292 aa27.07■■□□□ 1.92
TNRC6A-209ENST00000562829 AFAP1Q8N556 730 aa27.05■■□□□ 1.92
TNRC6A-209ENST00000562829 C9orf84Q5VXU9 1444 aa27.05■■□□□ 1.92
TNRC6A-209ENST00000562829 ATP10AO60312 1499 aa27.05■■□□□ 1.92
TNRC6A-209ENST00000562829 KDM5CP41229 1560 aa27.03■■□□□ 1.92
TNRC6A-209ENST00000562829 CDC42BPAQ5VT25 1732 aa27.03■■□□□ 1.92
TNRC6A-209ENST00000562829 PLPPR3Q6T4P5 718 aa27.03■■□□□ 1.92
TNRC6A-209ENST00000562829 ABCC1P33527 1531 aa27.01■■□□□ 1.91
TNRC6A-209ENST00000562829 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
TNRC6A-209ENST00000562829 FER1L4A9Z1Z3 1794 aa26.99■■□□□ 1.91
TNRC6A-209ENST00000562829 ITSN2Q9NZM3 1697 aa26.98■■□□□ 1.91
TNRC6A-209ENST00000562829 ZNF777Q9ULD5 760 aaPredicted RBP26.96■■□□□ 1.91
TNRC6A-209ENST00000562829 TRAPPC8Q9Y2L5 1435 aa26.96■■□□□ 1.91
TNRC6A-209ENST00000562829 MTUS2Q5JR59 1369 aa26.96■■□□□ 1.91
TNRC6A-209ENST00000562829 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.91
TNRC6A-209ENST00000562829 DIP2CQ9Y2E4 1556 aa26.94■■□□□ 1.9
TNRC6A-209ENST00000562829 GPATCH8Q9UKJ3 1502 aaKnown RBP26.92■■□□□ 1.9
TNRC6A-209ENST00000562829 ABCA6Q8N139 1617 aa26.92■■□□□ 1.9
TNRC6A-209ENST00000562829 MLH3Q9UHC1 1453 aa26.92■■□□□ 1.9
TNRC6A-209ENST00000562829 SAMD9LQ8IVG5 1584 aa26.9■■□□□ 1.9
TNRC6A-209ENST00000562829 LMTK3Q96Q04 1460 aa26.89■■□□□ 1.9
TNRC6A-209ENST00000562829 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.9
TNRC6A-209ENST00000562829 SYCP2Q9BX26 1530 aa26.88■■□□□ 1.89
TNRC6A-209ENST00000562829 REREQ9P2R6 1566 aa26.87■■□□□ 1.89
TNRC6A-209ENST00000562829 EHBP1L1Q8N3D4 1523 aa26.86■■□□□ 1.89
TNRC6A-209ENST00000562829 CFDP1Q9UEE9 299 aaPredicted RBP26.86■■□□□ 1.89
TNRC6A-209ENST00000562829 KIDINS220Q9ULH0 1771 aa26.84■■□□□ 1.89
TNRC6A-209ENST00000562829 HNRNPMP52272 730 aaKnown RBP eCLIP26.82■■□□□ 1.883e-7■■■■■ 29.2
TNRC6A-209ENST00000562829 PLEKHH2Q8IVE3 1493 aa26.81■■□□□ 1.88
TNRC6A-209ENST00000562829 ILDR1Q86SU0 546 aaPredicted RBP26.81■■□□□ 1.88
TNRC6A-209ENST00000562829 LOC105371045A0A1W2PR82 267 aa26.8■■□□□ 1.88
TNRC6A-209ENST00000562829 SPAG9O60271 1321 aaKnown RBP26.79■■□□□ 1.88
TNRC6A-209ENST00000562829 TIAM1Q13009 1591 aa26.79■■□□□ 1.88
TNRC6A-209ENST00000562829 HSPA2P54652 639 aa26.78■■□□□ 1.88
TNRC6A-209ENST00000562829 AGLP35573 1532 aa26.78■■□□□ 1.88
TNRC6A-209ENST00000562829 KIAA1107Q9UPP5 1409 aa26.77■■□□□ 1.88
TNRC6A-209ENST00000562829 CEBPAP49715 358 aaPredicted RBP26.77■■□□□ 1.88
TNRC6A-209ENST00000562829 ESF1Q9H501 851 aaKnown RBP26.76■■□□□ 1.87
TNRC6A-209ENST00000562829 ATP7AQ04656 1500 aa26.74■■□□□ 1.87
TNRC6A-209ENST00000562829 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
TNRC6A-209ENST00000562829 PREX1Q8TCU6 1659 aa26.71■■□□□ 1.87
TNRC6A-209ENST00000562829 VPS8Q8N3P4 1428 aa26.7■■□□□ 1.86
TNRC6A-209ENST00000562829 INO80Q9ULG1 1556 aaPredicted RBP26.7■■□□□ 1.86
TNRC6A-209ENST00000562829 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
TNRC6A-209ENST00000562829 NCOA2Q15596 1464 aa26.68■■□□□ 1.86
TNRC6A-209ENST00000562829 C3P01024 1663 aa26.66■■□□□ 1.86
TNRC6A-209ENST00000562829 A2MP01023 1474 aa26.64■■□□□ 1.86
TNRC6A-209ENST00000562829 UHRF1BP1Q6BDS2 1440 aa26.64■■□□□ 1.85
TNRC6A-209ENST00000562829 CNTLNQ9NXG0 1405 aa26.64■■□□□ 1.85
TNRC6A-209ENST00000562829 MBD5Q9P267 1494 aa26.62■■□□□ 1.85
TNRC6A-209ENST00000562829 SETD1BQ9UPS6 1966 aaKnown RBP26.61■■□□□ 1.85
TNRC6A-209ENST00000562829 PLXNC1O60486 1568 aa26.6■■□□□ 1.85
TNRC6A-209ENST00000562829 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
TNRC6A-209ENST00000562829 ADGBQ8N7X0 1667 aa26.59■■□□□ 1.85
TNRC6A-209ENST00000562829 LRRC9Q6ZRR7 1453 aa26.58■■□□□ 1.85
TNRC6A-209ENST00000562829 CCDC141Q6ZP82 1450 aa26.55■■□□□ 1.84
TNRC6A-209ENST00000562829 MROH2AA6NES4 1674 aa26.55■■□□□ 1.84
TNRC6A-209ENST00000562829 GGT6Q6P531 493 aa26.55■■□□□ 1.84
TNRC6A-209ENST00000562829 RTEL1-TNFRSF6BF6WH68 1400 aa26.54■■□□□ 1.84
TNRC6A-209ENST00000562829 CLTCQ00610 1675 aaKnown RBP26.53■■□□□ 1.84
TNRC6A-209ENST00000562829 FBXO41Q8TF61 875 aa26.51■■□□□ 1.83
TNRC6A-209ENST00000562829 ZMYM3Q14202 1370 aa26.5■■□□□ 1.83
TNRC6A-209ENST00000562829 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
TNRC6A-209ENST00000562829 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
TNRC6A-209ENST00000562829 KANK4Q5T7N3 995 aaPredicted RBP26.48■■□□□ 1.83
TNRC6A-209ENST00000562829 NPATQ14207 1427 aa26.47■■□□□ 1.83
TNRC6A-209ENST00000562829 DHX29Q7Z478 1369 aaKnown RBP26.46■■□□□ 1.83
TNRC6A-209ENST00000562829 STRCQ7RTU9 1775 aa26.46■■□□□ 1.83
TNRC6A-209ENST00000562829 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
TNRC6A-209ENST00000562829 TSPY4P0CV99 314 aa26.43■■□□□ 1.82
TNRC6A-209ENST00000562829 TSPY10P0CW01 314 aa26.43■■□□□ 1.82
TNRC6A-209ENST00000562829 APLP2Q06481 763 aa26.43■■□□□ 1.82
TNRC6A-209ENST00000562829 DMRT2Q9Y5R5 561 aa26.43■■□□□ 1.82
TNRC6A-209ENST00000562829 PPP6R1Q9UPN7 881 aa26.42■■□□□ 1.82
TNRC6A-209ENST00000562829 KIF3BO15066 747 aa26.41■■□□□ 1.82
TNRC6A-209ENST00000562829 MYOM3Q5VTT5 1437 aa26.39■■□□□ 1.82
TNRC6A-209ENST00000562829 PTPRKQ15262 1439 aa26.37■■□□□ 1.81
TNRC6A-209ENST00000562829 MIA2Q96PC5 1412 aa26.37■■□□□ 1.81
TNRC6A-209ENST00000562829 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
TNRC6A-209ENST00000562829 CERKQ8TCT0 537 aa26.36■■□□□ 1.81
TNRC6A-209ENST00000562829 CAMSAP1Q5T5Y3 1602 aa26.34■■□□□ 1.81
TNRC6A-209ENST00000562829 NCOA1Q15788 1441 aa26.33■■□□□ 1.81
TNRC6A-209ENST00000562829 PTPRTO14522 1441 aa26.32■■□□□ 1.8
TNRC6A-209ENST00000562829 KDM5DQ9BY66 1539 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms