RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 TSHZ2Q9NRE2 1034 aa7.5□□□□□ -1.21
CHD9-207ENST00000562806 POTEB2H3BUK9 544 aa7.49□□□□□ -1.21
CHD9-207ENST00000562806 SLC24A1O60721 1099 aa7.49□□□□□ -1.21
CHD9-207ENST00000562806 WDR70Q9NW82 654 aa7.49□□□□□ -1.21
CHD9-207ENST00000562806 CRISPLD2Q9H0B8 497 aa7.48□□□□□ -1.21
CHD9-207ENST00000562806 SNPHO15079 494 aa7.46□□□□□ -1.22
CHD9-207ENST00000562806 POTEJP0CG39 1038 aa7.46□□□□□ -1.22
CHD9-207ENST00000562806 SLAIN1Q8ND83 568 aa7.46□□□□□ -1.22
CHD9-207ENST00000562806 KIF3CO14782 793 aa7.45□□□□□ -1.22
CHD9-207ENST00000562806 FOXK1P85037 733 aa7.45□□□□□ -1.22
CHD9-207ENST00000562806 MFSD10Q14728 455 aa7.45□□□□□ -1.22
CHD9-207ENST00000562806 DDX27Q96GQ7 796 aaKnown RBP7.45□□□□□ -1.22
CHD9-207ENST00000562806 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
CHD9-207ENST00000562806 C2orf72A6NCS6 295 aa7.43□□□□□ -1.22
CHD9-207ENST00000562806 CADPS2Q86UW7 1296 aa7.43□□□□□ -1.22
CHD9-207ENST00000562806 NCKAP5LQ9HCH0 1330 aa7.43□□□□□ -1.22
CHD9-207ENST00000562806 PPP1R15BQ5SWA1 713 aa7.42□□□□□ -1.22
CHD9-207ENST00000562806 OTUD5Q96G74 571 aa7.42□□□□□ -1.22
CHD9-207ENST00000562806 RIMBP2O15034 1052 aa7.41□□□□□ -1.22
CHD9-207ENST00000562806 P3H3Q8IVL6 736 aa7.41□□□□□ -1.22
CHD9-207ENST00000562806 DOK7Q18PE1 504 aa7.4□□□□□ -1.22
CHD9-207ENST00000562806 TMEM92Q6UXU6 159 aa7.4□□□□□ -1.22
CHD9-207ENST00000562806 SLC34A2O95436 690 aa7.39□□□□□ -1.23
CHD9-207ENST00000562806 DSG2Q14126 1118 aa7.39□□□□□ -1.23
CHD9-207ENST00000562806 E2F4Q16254 413 aa7.39□□□□□ -1.23
CHD9-207ENST00000562806 PLPP6Q8IY26 295 aa7.39□□□□□ -1.23
CHD9-207ENST00000562806 TBC1D12O60347 775 aa7.38□□□□□ -1.23
CHD9-207ENST00000562806 ZSWIM6Q9HCJ5 1215 aa7.38□□□□□ -1.23
CHD9-207ENST00000562806 CAMK2BQ13554 666 aa7.36□□□□□ -1.23
CHD9-207ENST00000562806 ZNF710Q8N1W2 664 aa7.35□□□□□ -1.23
CHD9-207ENST00000562806 KDM2AQ9Y2K7 1162 aa7.35□□□□□ -1.23
CHD9-207ENST00000562806 ARIH1Q9Y4X5 557 aaPredicted RBP7.35□□□□□ -1.23
CHD9-207ENST00000562806 ZNF316A6NFI3 1004 aaPredicted RBP7.34□□□□□ -1.23
CHD9-207ENST00000562806 PTCD2Q8WV60 388 aaKnown RBP7.33□□□□□ -1.24
CHD9-207ENST00000562806 ARHGEF1Q92888 912 aaKnown RBP7.33□□□□□ -1.24
CHD9-207ENST00000562806 MAP3K9P80192 1104 aa7.3□□□□□ -1.24
CHD9-207ENST00000562806 OXER1Q8TDS5 423 aa7.3□□□□□ -1.24
CHD9-207ENST00000562806 SPDYE16A6NNV3 312 aaPredicted RBP7.29□□□□□ -1.24
CHD9-207ENST00000562806 HOXB3P14651 431 aaPredicted RBP7.29□□□□□ -1.24
CHD9-207ENST00000562806 PCDHGA4Q9Y5G9 962 aa7.28□□□□□ -1.24
CHD9-207ENST00000562806 PSDA5PKW4 1024 aaPredicted RBP7.26□□□□□ -1.25
CHD9-207ENST00000562806 HOXB1P14653 301 aaPredicted RBP7.26□□□□□ -1.25
CHD9-207ENST00000562806 KCNV2Q8TDN2 545 aa7.26□□□□□ -1.25
CHD9-207ENST00000562806 EMILIN3Q9NT22 766 aa7.26□□□□□ -1.25
CHD9-207ENST00000562806 GPR153Q6NV75 609 aa7.25□□□□□ -1.25
CHD9-207ENST00000562806 UPF1Q92900 1129 aaKnown RBP eCLIP7.25□□□□□ -1.25
CHD9-207ENST00000562806 PDIA6Q15084 440 aa7.24□□□□□ -1.25
CHD9-207ENST00000562806 DPYSL4O14531 572 aa7.23□□□□□ -1.25
CHD9-207ENST00000562806 NBR1Q14596 966 aa7.23□□□□□ -1.25
CHD9-207ENST00000562806 FAM163AQ96GL9 167 aaPredicted RBP7.23□□□□□ -1.25
CHD9-207ENST00000562806 ANO8Q9HCE9 1232 aaPredicted RBP7.23□□□□□ -1.25
CHD9-207ENST00000562806 TULP1O00294 542 aaPredicted RBP7.22□□□□□ -1.25
CHD9-207ENST00000562806 EVI5O60447 810 aa7.22□□□□□ -1.25
CHD9-207ENST00000562806 ARSIQ5FYB1 569 aa7.22□□□□□ -1.25
CHD9-207ENST00000562806 SMYD5Q6GMV2 418 aa7.22□□□□□ -1.25
CHD9-207ENST00000562806 ST18O60284 1047 aa7.21□□□□□ -1.26
CHD9-207ENST00000562806 PTGER2P43116 358 aa7.21□□□□□ -1.26
CHD9-207ENST00000562806 NUDT7P0C024 238 aa7.19□□□□□ -1.26
CHD9-207ENST00000562806 BCANQ96GW7 911 aa7.19□□□□□ -1.26
CHD9-207ENST00000562806 KDM4FA0A1W2PPD8 638 aa7.18□□□□□ -1.26
CHD9-207ENST00000562806 EMP3P54852 163 aa7.18□□□□□ -1.26
CHD9-207ENST00000562806 PHF14O94880 888 aa7.17□□□□□ -1.26
CHD9-207ENST00000562806 JPH4Q96JJ6 628 aa7.17□□□□□ -1.26
CHD9-207ENST00000562806 EPAS1Q99814 870 aa7.17□□□□□ -1.26
CHD9-207ENST00000562806 PPP4R3BQ5MIZ7 849 aa7.16□□□□□ -1.26
CHD9-207ENST00000562806 FBXW7Q969H0 707 aa7.16□□□□□ -1.26
CHD9-207ENST00000562806 ERBB3P21860 1342 aa7.16□□□□□ -1.26
CHD9-207ENST00000562806 KCNH8Q96L42 1107 aa7.14□□□□□ -1.27
CHD9-207ENST00000562806 LHX6Q9UPM6 363 aa7.14□□□□□ -1.27
CHD9-207ENST00000562806 TESPA1A2RU30 521 aaPredicted RBP7.13□□□□□ -1.27
CHD9-207ENST00000562806 FOSBP53539 338 aa7.13□□□□□ -1.27
CHD9-207ENST00000562806 TYW1BQ6NUM6 668 aa7.13□□□□□ -1.27
CHD9-207ENST00000562806 KHSRPQ92945 711 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD9-207ENST00000562806 ZNF454Q8N9F8 522 aa7.12□□□□□ -1.27
CHD9-207ENST00000562806 ZDHHC16Q969W1 377 aa7.12□□□□□ -1.27
CHD9-207ENST00000562806 SEMA3EO15041 775 aa7.11□□□□□ -1.27
CHD9-207ENST00000562806 PBX2P40425 430 aa7.11□□□□□ -1.27
CHD9-207ENST00000562806 FAM205CA6NFA0 338 aa7.1□□□□□ -1.27
CHD9-207ENST00000562806 GRXCR2A6NFK2 248 aa7.1□□□□□ -1.27
CHD9-207ENST00000562806 VARS2Q5ST30 1063 aaKnown RBP7.1□□□□□ -1.27
CHD9-207ENST00000562806 DDX12PQ92771 950 aa7.1□□□□□ -1.27
CHD9-207ENST00000562806 MARVELD3Q96A59 401 aa7.1□□□□□ -1.27
CHD9-207ENST00000562806 PCDHGA10Q9Y5H3 936 aa7.1□□□□□ -1.27
CHD9-207ENST00000562806 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.27
CHD9-207ENST00000562806 ZNF687Q8N1G0 1237 aa7.09□□□□□ -1.27
CHD9-207ENST00000562806 CERKQ8TCT0 537 aa7.08□□□□□ -1.28
CHD9-207ENST00000562806 HS3ST6Q96QI5 342 aa7.08□□□□□ -1.28
CHD9-207ENST00000562806 BCL2L12Q9HB09 334 aa7.08□□□□□ -1.28
CHD9-207ENST00000562806 PCDH10Q9P2E7 1040 aa7.08□□□□□ -1.28
CHD9-207ENST00000562806 PTPREP23469 700 aa7.07□□□□□ -1.28
CHD9-207ENST00000562806 EN1Q05925 392 aaPredicted RBP7.07□□□□□ -1.28
CHD9-207ENST00000562806 ARHGAP33O14559 1287 aa7.06□□□□□ -1.28
CHD9-207ENST00000562806 MAP3K7O43318 606 aa7.06□□□□□ -1.28
CHD9-207ENST00000562806 OSBPP22059 807 aa7.06□□□□□ -1.28
CHD9-207ENST00000562806 MLLT3P42568 568 aaPredicted RBP7.06□□□□□ -1.28
CHD9-207ENST00000562806 POTEMA6NI47 508 aa7.05□□□□□ -1.28
CHD9-207ENST00000562806 POTEGQ6S5H5 508 aa7.05□□□□□ -1.28
CHD9-207ENST00000562806 C6orf132Q5T0Z8 1188 aa7.04□□□□□ -1.28
CHD9-207ENST00000562806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHD9-207ENST00000562806 ADAM33Q9BZ11 813 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms