RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 MLECQ14165 292 aa27.33■■□□□ 1.97
CMTM3-205ENST00000562707 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
CMTM3-205ENST00000562707 PCF11O94913 1555 aaKnown RBP27.33■■□□□ 1.97
CMTM3-205ENST00000562707 LMTK3Q96Q04 1460 aa27.31■■□□□ 1.96
CMTM3-205ENST00000562707 ARHGAP35Q9NRY4 1499 aa27.31■■□□□ 1.96
CMTM3-205ENST00000562707 HECW1Q76N89 1606 aa27.29■■□□□ 1.96
CMTM3-205ENST00000562707 RIMS1Q86UR5 1692 aaKnown RBP27.27■■□□□ 1.96
CMTM3-205ENST00000562707 HSPA2P54652 639 aa27.25■■□□□ 1.95
CMTM3-205ENST00000562707 ATP10AO60312 1499 aa27.24■■□□□ 1.95
CMTM3-205ENST00000562707 CLIP1P30622 1438 aa27.23■■□□□ 1.95
CMTM3-205ENST00000562707 TROQ12816 1431 aaPredicted RBP27.23■■□□□ 1.95
CMTM3-205ENST00000562707 MYT1LQ9UL68 1186 aa27.2■■□□□ 1.94
CMTM3-205ENST00000562707 C9orf84Q5VXU9 1444 aa27.19■■□□□ 1.94
CMTM3-205ENST00000562707 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
CMTM3-205ENST00000562707 KIF14Q15058 1648 aa27.16■■□□□ 1.94
CMTM3-205ENST00000562707 ZNF518AQ6AHZ1 1483 aa27.16■■□□□ 1.94
CMTM3-205ENST00000562707 ARHGAP5Q13017 1502 aa27.16■■□□□ 1.94
CMTM3-205ENST00000562707 MYO5CQ9NQX4 1742 aa27.15■■□□□ 1.94
CMTM3-205ENST00000562707 SIGLEC1Q9BZZ2 1709 aa27.14■■□□□ 1.94
CMTM3-205ENST00000562707 ARHGEF12Q9NZN5 1544 aa27.1■■□□□ 1.93
CMTM3-205ENST00000562707 CEBPAP49715 358 aaPredicted RBP27.09■■□□□ 1.93
CMTM3-205ENST00000562707 FER1L4A9Z1Z3 1794 aa27.06■■□□□ 1.92
CMTM3-205ENST00000562707 CASKIN1Q8WXD9 1431 aa27.06■■□□□ 1.92
CMTM3-205ENST00000562707 CCDC18Q5T9S5 1454 aa27.04■■□□□ 1.92
CMTM3-205ENST00000562707 KDM5CP41229 1560 aa27.04■■□□□ 1.92
CMTM3-205ENST00000562707 CERKQ8TCT0 537 aa27.01■■□□□ 1.91
CMTM3-205ENST00000562707 ESF1Q9H501 851 aaKnown RBP27.01■■□□□ 1.91
CMTM3-205ENST00000562707 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
CMTM3-205ENST00000562707 TRAPPC8Q9Y2L5 1435 aa26.99■■□□□ 1.91
CMTM3-205ENST00000562707 DMRT2Q9Y5R5 561 aa26.97■■□□□ 1.91
CMTM3-205ENST00000562707 DIP2CQ9Y2E4 1556 aa26.96■■□□□ 1.91
CMTM3-205ENST00000562707 ZNF777Q9ULD5 760 aaPredicted RBP26.95■■□□□ 1.9
CMTM3-205ENST00000562707 LRRIQ1Q96JM4 1722 aa26.95■■□□□ 1.9
CMTM3-205ENST00000562707 UHRF1BP1Q6BDS2 1440 aa26.94■■□□□ 1.9
CMTM3-205ENST00000562707 REREQ9P2R6 1566 aa26.93■■□□□ 1.9
CMTM3-205ENST00000562707 CDC42BPBQ9Y5S2 1711 aa26.93■■□□□ 1.9
CMTM3-205ENST00000562707 ABCC1P33527 1531 aa26.92■■□□□ 1.9
CMTM3-205ENST00000562707 PREX2Q70Z35 1606 aa26.91■■□□□ 1.9
CMTM3-205ENST00000562707 FYCO1Q9BQS8 1478 aa26.91■■□□□ 1.9
CMTM3-205ENST00000562707 PREX1Q8TCU6 1659 aa26.9■■□□□ 1.9
CMTM3-205ENST00000562707 AGLP35573 1532 aa26.9■■□□□ 1.9
CMTM3-205ENST00000562707 ABCA6Q8N139 1617 aa26.88■■□□□ 1.89
CMTM3-205ENST00000562707 SPAG9O60271 1321 aaKnown RBP26.85■■□□□ 1.89
CMTM3-205ENST00000562707 HNRNPMP52272 730 aaKnown RBP eCLIP26.84■■□□□ 1.89
CMTM3-205ENST00000562707 ITSN2Q9NZM3 1697 aa26.82■■□□□ 1.88
CMTM3-205ENST00000562707 CNTLNQ9NXG0 1405 aa26.82■■□□□ 1.88
CMTM3-205ENST00000562707 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
CMTM3-205ENST00000562707 GPATCH8Q9UKJ3 1502 aaKnown RBP26.81■■□□□ 1.88
CMTM3-205ENST00000562707 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
CMTM3-205ENST00000562707 SETD1BQ9UPS6 1966 aaKnown RBP26.77■■□□□ 1.88
CMTM3-205ENST00000562707 KIDINS220Q9ULH0 1771 aa26.77■■□□□ 1.88
CMTM3-205ENST00000562707 CDC42BPAQ5VT25 1732 aa26.77■■□□□ 1.88
CMTM3-205ENST00000562707 SAMD9LQ8IVG5 1584 aa26.77■■□□□ 1.88
CMTM3-205ENST00000562707 MTUS2Q5JR59 1369 aa26.76■■□□□ 1.87
CMTM3-205ENST00000562707 KIAA1107Q9UPP5 1409 aa26.75■■□□□ 1.87
CMTM3-205ENST00000562707 SYCP2Q9BX26 1530 aa26.75■■□□□ 1.87
CMTM3-205ENST00000562707 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
CMTM3-205ENST00000562707 PTPRTO14522 1441 aa26.74■■□□□ 1.87
CMTM3-205ENST00000562707 C3P01024 1663 aa26.74■■□□□ 1.87
CMTM3-205ENST00000562707 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
CMTM3-205ENST00000562707 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
CMTM3-205ENST00000562707 NPATQ14207 1427 aa26.69■■□□□ 1.86
CMTM3-205ENST00000562707 GGT6Q6P531 493 aa26.67■■□□□ 1.86
CMTM3-205ENST00000562707 A2MP01023 1474 aa26.67■■□□□ 1.86
CMTM3-205ENST00000562707 ATP7AQ04656 1500 aa26.66■■□□□ 1.86
CMTM3-205ENST00000562707 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
CMTM3-205ENST00000562707 PPP6R1Q9UPN7 881 aa26.63■■□□□ 1.85
CMTM3-205ENST00000562707 ZNF644Q9H582 1327 aaPredicted RBP26.63■■□□□ 1.85
CMTM3-205ENST00000562707 MROH2AA6NES4 1674 aa26.59■■□□□ 1.85
CMTM3-205ENST00000562707 SUPT6HQ7KZ85 1726 aaKnown RBP26.59■■□□□ 1.85
CMTM3-205ENST00000562707 INO80Q9ULG1 1556 aaPredicted RBP26.58■■□□□ 1.85
CMTM3-205ENST00000562707 NCKAP5LQ9HCH0 1330 aa26.57■■□□□ 1.84
CMTM3-205ENST00000562707 PLXNC1O60486 1568 aa26.56■■□□□ 1.84
CMTM3-205ENST00000562707 CAMSAP1Q5T5Y3 1602 aa26.56■■□□□ 1.84
CMTM3-205ENST00000562707 EHBP1L1Q8N3D4 1523 aa26.55■■□□□ 1.84
CMTM3-205ENST00000562707 PKD2Q13563 968 aa26.54■■□□□ 1.84
CMTM3-205ENST00000562707 PTPRKQ15262 1439 aa26.54■■□□□ 1.84
CMTM3-205ENST00000562707 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
CMTM3-205ENST00000562707 RTEL1-TNFRSF6BF6WH68 1400 aa26.53■■□□□ 1.84
CMTM3-205ENST00000562707 MBD5Q9P267 1494 aa26.53■■□□□ 1.84
CMTM3-205ENST00000562707 LTBP4Q8N2S1 1624 aa26.53■■□□□ 1.84
CMTM3-205ENST00000562707 TIAM1Q13009 1591 aa26.51■■□□□ 1.83
CMTM3-205ENST00000562707 DHX29Q7Z478 1369 aaKnown RBP26.51■■□□□ 1.83
CMTM3-205ENST00000562707 DISP3Q9P2K9 1392 aa26.51■■□□□ 1.83
CMTM3-205ENST00000562707 CLTCQ00610 1675 aaKnown RBP26.5■■□□□ 1.83
CMTM3-205ENST00000562707 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
CMTM3-205ENST00000562707 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
CMTM3-205ENST00000562707 KIF3BO15066 747 aa26.47■■□□□ 1.83
CMTM3-205ENST00000562707 PLA2R1Q13018 1463 aa26.46■■□□□ 1.83
CMTM3-205ENST00000562707 ZNF335Q9H4Z2 1342 aaPredicted RBP26.45■■□□□ 1.83
CMTM3-205ENST00000562707 ADGBQ8N7X0 1667 aa26.45■■□□□ 1.82
CMTM3-205ENST00000562707 CEP170BQ9Y4F5 1589 aaPredicted RBP26.43■■□□□ 1.82
CMTM3-205ENST00000562707 MYO3AQ8NEV4 1616 aa26.42■■□□□ 1.82
CMTM3-205ENST00000562707 NCOA2Q15596 1464 aa26.42■■□□□ 1.82
CMTM3-205ENST00000562707 CCDC141Q6ZP82 1450 aa26.42■■□□□ 1.82
CMTM3-205ENST00000562707 TSPY4P0CV99 314 aa26.4■■□□□ 1.82
CMTM3-205ENST00000562707 TSPY10P0CW01 314 aa26.4■■□□□ 1.82
CMTM3-205ENST00000562707 TCOF1Q13428 1488 aaKnown RBP26.4■■□□□ 1.82
CMTM3-205ENST00000562707 WASHC2CQ9Y4E1 1318 aa26.39■■□□□ 1.82
CMTM3-205ENST00000562707 UBAP1LF5GYI3 381 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms