RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 PLA2R1Q13018 1463 aa9.3□□□□□ -0.92
LINC01963-201ENST00000562038 ARHGAP35Q9NRY4 1499 aa9.3□□□□□ -0.92
LINC01963-201ENST00000562038 SYNMO15061 1565 aa9.29□□□□□ -0.92
LINC01963-201ENST00000562038 POGZQ7Z3K3 1410 aa9.28□□□□□ -0.92
LINC01963-201ENST00000562038 ALKQ9UM73 1620 aa9.28□□□□□ -0.92
LINC01963-201ENST00000562038 CASKIN1Q8WXD9 1431 aa9.28□□□□□ -0.92
LINC01963-201ENST00000562038 PTPRGP23470 1445 aa9.27□□□□□ -0.93
LINC01963-201ENST00000562038 NCOA1Q15788 1441 aa9.27□□□□□ -0.93
LINC01963-201ENST00000562038 LRP5O75197 1615 aa9.26□□□□□ -0.93
LINC01963-201ENST00000562038 AGLP35573 1532 aa9.26□□□□□ -0.93
LINC01963-201ENST00000562038 LRRIQ1Q96JM4 1722 aa9.26□□□□□ -0.93
LINC01963-201ENST00000562038 C3P01024 1663 aa9.25□□□□□ -0.93
LINC01963-201ENST00000562038 NUP153P49790 1475 aaKnown RBP9.23□□□□□ -0.93
LINC01963-201ENST00000562038 POLR1AO95602 1720 aaPredicted RBP9.23□□□□□ -0.93
LINC01963-201ENST00000562038 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
LINC01963-201ENST00000562038 PLPPR3Q6T4P5 718 aa9.22□□□□□ -0.93
LINC01963-201ENST00000562038 RNF17Q9BXT8 1623 aaKnown RBP9.22□□□□□ -0.93
LINC01963-201ENST00000562038 ZFYVE16Q7Z3T8 1539 aa9.2□□□□□ -0.94
LINC01963-201ENST00000562038 NPATQ14207 1427 aa9.2□□□□□ -0.94
LINC01963-201ENST00000562038 EHBP1L1Q8N3D4 1523 aa9.2□□□□□ -0.94
LINC01963-201ENST00000562038 CDK12Q9NYV4 1490 aaPredicted RBP9.2□□□□□ -0.94
LINC01963-201ENST00000562038 FAM9AQ8IZU1 332 aaPredicted RBP9.2□□□□□ -0.94
LINC01963-201ENST00000562038 ITSN2Q9NZM3 1697 aa9.2□□□□□ -0.94
LINC01963-201ENST00000562038 CLIP1P30622 1438 aa9.2□□□□□ -0.94
LINC01963-201ENST00000562038 TCOF1Q13428 1488 aaKnown RBP9.19□□□□□ -0.94
LINC01963-201ENST00000562038 KIF14Q15058 1648 aa9.19□□□□□ -0.94
LINC01963-201ENST00000562038 MYO5CQ9NQX4 1742 aa9.18□□□□□ -0.94
LINC01963-201ENST00000562038 CEP162Q5TB80 1403 aa9.18□□□□□ -0.94
LINC01963-201ENST00000562038 AKNAQ7Z591 1439 aa9.18□□□□□ -0.94
LINC01963-201ENST00000562038 ATP10BO94823 1461 aa9.18□□□□□ -0.94
LINC01963-201ENST00000562038 PREX2Q70Z35 1606 aa9.18□□□□□ -0.94
LINC01963-201ENST00000562038 FAM135AQ9P2D6 1515 aa9.18□□□□□ -0.94
LINC01963-201ENST00000562038 EHMT2Q96KQ7 1210 aa9.18□□□□□ -0.94
LINC01963-201ENST00000562038 DEPDC5O75140 1603 aa9.17□□□□□ -0.94
LINC01963-201ENST00000562038 VPS8Q8N3P4 1428 aa9.17□□□□□ -0.94
LINC01963-201ENST00000562038 TIAM1Q13009 1591 aa9.17□□□□□ -0.94
LINC01963-201ENST00000562038 UHRF1BP1Q6BDS2 1440 aa9.15□□□□□ -0.94
LINC01963-201ENST00000562038 KDM5CP41229 1560 aa9.15□□□□□ -0.95
LINC01963-201ENST00000562038 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
LINC01963-201ENST00000562038 TROQ12816 1431 aaPredicted RBP9.13□□□□□ -0.95
LINC01963-201ENST00000562038 SETD1AO15047 1707 aaKnown RBP9.13□□□□□ -0.95
LINC01963-201ENST00000562038 MYO3AQ8NEV4 1616 aa9.12□□□□□ -0.95
LINC01963-201ENST00000562038 PTPRKQ15262 1439 aa9.12□□□□□ -0.95
LINC01963-201ENST00000562038 CDC42BPAQ5VT25 1732 aa9.11□□□□□ -0.95
LINC01963-201ENST00000562038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.11□□□□□ -0.95
LINC01963-201ENST00000562038 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
LINC01963-201ENST00000562038 VWDEQ8N2E2 1590 aa9.1□□□□□ -0.95
LINC01963-201ENST00000562038 PLEKHH2Q8IVE3 1493 aa9.1□□□□□ -0.95
LINC01963-201ENST00000562038 C9orf84Q5VXU9 1444 aa9.09□□□□□ -0.95
LINC01963-201ENST00000562038 MAST1Q9Y2H9 1570 aa9.09□□□□□ -0.95
LINC01963-201ENST00000562038 CNTLNQ9NXG0 1405 aa9.09□□□□□ -0.95
LINC01963-201ENST00000562038 ARHGEF5Q12774 1597 aa9.09□□□□□ -0.95
LINC01963-201ENST00000562038 CDC42BPBQ9Y5S2 1711 aa9.09□□□□□ -0.95
LINC01963-201ENST00000562038 NHSL1Q5SYE7 1610 aa9.07□□□□□ -0.96
LINC01963-201ENST00000562038 NEURL4Q96JN8 1562 aa9.06□□□□□ -0.96
LINC01963-201ENST00000562038 DENND4BO75064 1496 aaPredicted RBP9.06□□□□□ -0.96
LINC01963-201ENST00000562038 CAMSAP1Q5T5Y3 1602 aa9.06□□□□□ -0.96
LINC01963-201ENST00000562038 CROCC2H7BZ55 1655 aa9.06□□□□□ -0.96
LINC01963-201ENST00000562038 ABCC1P33527 1531 aa9.06□□□□□ -0.96
LINC01963-201ENST00000562038 PLCH2O75038 1416 aa9.05□□□□□ -0.96
LINC01963-201ENST00000562038 ATP10AO60312 1499 aa9.05□□□□□ -0.96
LINC01963-201ENST00000562038 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
LINC01963-201ENST00000562038 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
LINC01963-201ENST00000562038 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
LINC01963-201ENST00000562038 MED14O60244 1454 aa9.05□□□□□ -0.96
LINC01963-201ENST00000562038 LRRC9Q6ZRR7 1453 aa9.05□□□□□ -0.96
LINC01963-201ENST00000562038 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
LINC01963-201ENST00000562038 TRAPPC8Q9Y2L5 1435 aa9.04□□□□□ -0.96
LINC01963-201ENST00000562038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC01963-201ENST00000562038 CDK11AQ9UQ88 783 aaPredicted RBP9.04□□□□□ -0.96
LINC01963-201ENST00000562038 UBTFP17480 764 aaKnown RBP9.03□□□□□ -0.96
LINC01963-201ENST00000562038 INO80Q9ULG1 1556 aaPredicted RBP9.03□□□□□ -0.96
LINC01963-201ENST00000562038 SHANK2Q9UPX8 1470 aa9.03□□□□□ -0.96
LINC01963-201ENST00000562038 PLXNC1O60486 1568 aa9.02□□□□□ -0.97
LINC01963-201ENST00000562038 XIRP1Q702N8 1843 aaKnown RBP9.02□□□□□ -0.97
LINC01963-201ENST00000562038 RTN4Q9NQC3 1192 aaKnown RBP9.02□□□□□ -0.97
LINC01963-201ENST00000562038 CEP170BQ9Y4F5 1589 aaPredicted RBP9.01□□□□□ -0.97
LINC01963-201ENST00000562038 ADGBQ8N7X0 1667 aa9.01□□□□□ -0.97
LINC01963-201ENST00000562038 EIF2AK4Q9P2K8 1649 aaKnown RBP9.01□□□□□ -0.97
LINC01963-201ENST00000562038 DIP2CQ9Y2E4 1556 aa9.01□□□□□ -0.97
LINC01963-201ENST00000562038 SHPRHQ149N8 1683 aa9□□□□□ -0.97
LINC01963-201ENST00000562038 SAMD9LQ8IVG5 1584 aa9□□□□□ -0.97
LINC01963-201ENST00000562038 MLH3Q9UHC1 1453 aa8.99□□□□□ -0.97
LINC01963-201ENST00000562038 GPATCH8Q9UKJ3 1502 aaKnown RBP8.98□□□□□ -0.97
LINC01963-201ENST00000562038 RTEL1-TNFRSF6BF6WH68 1400 aa8.98□□□□□ -0.97
LINC01963-201ENST00000562038 PKD2Q13563 968 aa8.98□□□□□ -0.97
LINC01963-201ENST00000562038 ZC3H13Q5T200 1668 aaKnown RBP8.98□□□□□ -0.97
LINC01963-201ENST00000562038 DNMT1P26358 1616 aaKnown RBP8.97□□□□□ -0.97
LINC01963-201ENST00000562038 NCOA2Q15596 1464 aa8.97□□□□□ -0.97
LINC01963-201ENST00000562038 ZNF518AQ6AHZ1 1483 aa8.97□□□□□ -0.97
LINC01963-201ENST00000562038 PLEKHD1A6NEE1 506 aa8.96□□□□□ -0.98
LINC01963-201ENST00000562038 STRCP1A6NGW2 1772 aa8.96□□□□□ -0.98
LINC01963-201ENST00000562038 MYOM3Q5VTT5 1437 aa8.94□□□□□ -0.98
LINC01963-201ENST00000562038 RGS17Q9UGC6 210 aaPredicted RBP8.94□□□□□ -0.98
LINC01963-201ENST00000562038 ADGRL2O95490 1459 aa8.94□□□□□ -0.98
LINC01963-201ENST00000562038 LRRC7Q96NW7 1537 aa8.94□□□□□ -0.98
LINC01963-201ENST00000562038 IFFO2Q5TF58 517 aa8.94□□□□□ -0.98
LINC01963-201ENST00000562038 PTPN23Q9H3S7 1636 aa8.93□□□□□ -0.98
LINC01963-201ENST00000562038 KDM5AP29375 1690 aaKnown RBP8.93□□□□□ -0.98
LINC01963-201ENST00000562038 ABCA6Q8N139 1617 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms