RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 SCAPERQ9BY12 1400 aa20.27■□□□□ 0.84
SHF-211ENST00000561278 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
SHF-211ENST00000561278 ZFYVE16Q7Z3T8 1539 aa20.27■□□□□ 0.84
SHF-211ENST00000561278 FYCO1Q9BQS8 1478 aa20.27■□□□□ 0.84
SHF-211ENST00000561278 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.83
SHF-211ENST00000561278 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
SHF-211ENST00000561278 BCORL1Q5H9F3 1711 aa20.25■□□□□ 0.83
SHF-211ENST00000561278 ADAMTSL3P82987 1691 aa20.25■□□□□ 0.83
SHF-211ENST00000561278 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
SHF-211ENST00000561278 MADDQ8WXG6 1647 aa20.22■□□□□ 0.83
SHF-211ENST00000561278 PTPRMP28827 1452 aa20.21■□□□□ 0.83
SHF-211ENST00000561278 MAGI2Q86UL8 1455 aa20.21■□□□□ 0.83
SHF-211ENST00000561278 PREX2Q70Z35 1606 aa20.19■□□□□ 0.82
SHF-211ENST00000561278 ZNF518AQ6AHZ1 1483 aa20.18■□□□□ 0.82
SHF-211ENST00000561278 CDC42BPBQ9Y5S2 1711 aa20.16■□□□□ 0.82
SHF-211ENST00000561278 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
SHF-211ENST00000561278 RIMS1Q86UR5 1692 aaKnown RBP20.16■□□□□ 0.82
SHF-211ENST00000561278 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
SHF-211ENST00000561278 MLECQ14165 292 aa20.13■□□□□ 0.81
SHF-211ENST00000561278 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
SHF-211ENST00000561278 C9orf84Q5VXU9 1444 aa20.12■□□□□ 0.81
SHF-211ENST00000561278 KDM5CP41229 1560 aa20.12■□□□□ 0.81
SHF-211ENST00000561278 ABCC1P33527 1531 aa20.12■□□□□ 0.81
SHF-211ENST00000561278 ATP10AO60312 1499 aa20.11■□□□□ 0.81
SHF-211ENST00000561278 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
SHF-211ENST00000561278 PLPPR3Q6T4P5 718 aa20.11■□□□□ 0.81
SHF-211ENST00000561278 AFAP1Q8N556 730 aa20.11■□□□□ 0.81
SHF-211ENST00000561278 FOXD1Q16676 465 aa20.09■□□□□ 0.81
SHF-211ENST00000561278 ITSN2Q9NZM3 1697 aa20.09■□□□□ 0.81
SHF-211ENST00000561278 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.81
SHF-211ENST00000561278 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.8
SHF-211ENST00000561278 FER1L4A9Z1Z3 1794 aa20.07■□□□□ 0.8
SHF-211ENST00000561278 TRAPPC8Q9Y2L5 1435 aa20.06■□□□□ 0.8
SHF-211ENST00000561278 ARHGEF12Q9NZN5 1544 aa20.06■□□□□ 0.8
SHF-211ENST00000561278 DIP2CQ9Y2E4 1556 aa20.05■□□□□ 0.8
SHF-211ENST00000561278 ABCA6Q8N139 1617 aa20.04■□□□□ 0.8
SHF-211ENST00000561278 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
SHF-211ENST00000561278 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
SHF-211ENST00000561278 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
SHF-211ENST00000561278 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.8
SHF-211ENST00000561278 SYCP2Q9BX26 1530 aa20.02■□□□□ 0.8
SHF-211ENST00000561278 MLH3Q9UHC1 1453 aa20.02■□□□□ 0.8
SHF-211ENST00000561278 LMTK3Q96Q04 1460 aa19.99■□□□□ 0.79
SHF-211ENST00000561278 CFDP1Q9UEE9 299 aaPredicted RBP19.99■□□□□ 0.79
SHF-211ENST00000561278 REREQ9P2R6 1566 aa19.98■□□□□ 0.79
SHF-211ENST00000561278 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
SHF-211ENST00000561278 KIDINS220Q9ULH0 1771 aa19.96■□□□□ 0.79
SHF-211ENST00000561278 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
SHF-211ENST00000561278 PLEKHH2Q8IVE3 1493 aa19.96■□□□□ 0.79
SHF-211ENST00000561278 HNRNPMP52272 730 aaKnown RBP eCLIP19.95■□□□□ 0.784e-24■□□□□ 9.7
SHF-211ENST00000561278 SPAG9O60271 1321 aaKnown RBP19.93■□□□□ 0.78
SHF-211ENST00000561278 KIAA1107Q9UPP5 1409 aa19.92■□□□□ 0.78
SHF-211ENST00000561278 AGLP35573 1532 aa19.92■□□□□ 0.78
SHF-211ENST00000561278 ESF1Q9H501 851 aaKnown RBP19.91■□□□□ 0.78
SHF-211ENST00000561278 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
SHF-211ENST00000561278 CEBPAP49715 358 aaPredicted RBP19.9■□□□□ 0.78
SHF-211ENST00000561278 HSPA2P54652 639 aa19.9■□□□□ 0.78
SHF-211ENST00000561278 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
SHF-211ENST00000561278 SUPT6HQ7KZ85 1726 aaKnown RBP19.9■□□□□ 0.78
SHF-211ENST00000561278 ILDR1Q86SU0 546 aaPredicted RBP19.89■□□□□ 0.77
SHF-211ENST00000561278 INO80Q9ULG1 1556 aaPredicted RBP19.89■□□□□ 0.77
SHF-211ENST00000561278 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
SHF-211ENST00000561278 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
SHF-211ENST00000561278 PREX1Q8TCU6 1659 aa19.87■□□□□ 0.77
SHF-211ENST00000561278 C3P01024 1663 aa19.83■□□□□ 0.76
SHF-211ENST00000561278 A2MP01023 1474 aa19.82■□□□□ 0.76
SHF-211ENST00000561278 UHRF1BP1Q6BDS2 1440 aa19.82■□□□□ 0.76
SHF-211ENST00000561278 CAMSAP2Q08AD1 1489 aa19.81■□□□□ 0.76
SHF-211ENST00000561278 CNTLNQ9NXG0 1405 aa19.81■□□□□ 0.76
SHF-211ENST00000561278 PLXNC1O60486 1568 aa19.81■□□□□ 0.76
SHF-211ENST00000561278 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
SHF-211ENST00000561278 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
SHF-211ENST00000561278 ADGBQ8N7X0 1667 aa19.79■□□□□ 0.76
SHF-211ENST00000561278 CCDC141Q6ZP82 1450 aa19.78■□□□□ 0.76
SHF-211ENST00000561278 GGT6Q6P531 493 aa19.75■□□□□ 0.75
SHF-211ENST00000561278 MROH2AA6NES4 1674 aa19.75■□□□□ 0.75
SHF-211ENST00000561278 RTEL1-TNFRSF6BF6WH68 1400 aa19.74■□□□□ 0.75
SHF-211ENST00000561278 CLTCQ00610 1675 aaKnown RBP19.74■□□□□ 0.75
SHF-211ENST00000561278 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
SHF-211ENST00000561278 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
SHF-211ENST00000561278 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
SHF-211ENST00000561278 APLP2Q06481 763 aa19.7■□□□□ 0.74
SHF-211ENST00000561278 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
SHF-211ENST00000561278 NPATQ14207 1427 aa19.68■□□□□ 0.74
SHF-211ENST00000561278 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
SHF-211ENST00000561278 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
SHF-211ENST00000561278 TSPY4P0CV99 314 aa19.67■□□□□ 0.74
SHF-211ENST00000561278 TSPY10P0CW01 314 aa19.67■□□□□ 0.74
SHF-211ENST00000561278 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
SHF-211ENST00000561278 MYOM3Q5VTT5 1437 aa19.67■□□□□ 0.74
SHF-211ENST00000561278 SETD1BQ9UPS6 1966 aaKnown RBP19.66■□□□□ 0.74
SHF-211ENST00000561278 STRCQ7RTU9 1775 aa19.65■□□□□ 0.74
SHF-211ENST00000561278 KIF3BO15066 747 aa19.64■□□□□ 0.73
SHF-211ENST00000561278 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
SHF-211ENST00000561278 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
SHF-211ENST00000561278 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
SHF-211ENST00000561278 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
SHF-211ENST00000561278 PTPRKQ15262 1439 aa19.61■□□□□ 0.73
SHF-211ENST00000561278 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
SHF-211ENST00000561278 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms