RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 C3orf67Q6ZVT6 689 aa7.9□□□□□ -1.14
CTDSPL2-211ENST00000561189 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.9□□□□□ -1.14
CTDSPL2-211ENST00000561189 KIF3CO14782 793 aa7.88□□□□□ -1.15
CTDSPL2-211ENST00000561189 CRISPLD2Q9H0B8 497 aa7.85□□□□□ -1.15
CTDSPL2-211ENST00000561189 TMEM92Q6UXU6 159 aa7.83□□□□□ -1.16
CTDSPL2-211ENST00000561189 GPHNQ9NQX3 736 aaPredicted RBP7.83□□□□□ -1.16
CTDSPL2-211ENST00000561189 SLAIN1Q8ND83 568 aa7.82□□□□□ -1.16
CTDSPL2-211ENST00000561189 MFSD10Q14728 455 aa7.81□□□□□ -1.16
CTDSPL2-211ENST00000561189 TSHZ2Q9NRE2 1034 aa7.81□□□□□ -1.16
CTDSPL2-211ENST00000561189 PDE4AP27815 886 aa7.8□□□□□ -1.16
CTDSPL2-211ENST00000561189 FOXK1P85037 733 aa7.8□□□□□ -1.16
CTDSPL2-211ENST00000561189 NCKAP5LQ9HCH0 1330 aa7.79□□□□□ -1.16
CTDSPL2-211ENST00000561189 SNPHO15079 494 aa7.79□□□□□ -1.16
CTDSPL2-211ENST00000561189 TMC2Q8TDI7 906 aa7.79□□□□□ -1.16
CTDSPL2-211ENST00000561189 C2orf72A6NCS6 295 aa7.78□□□□□ -1.16
CTDSPL2-211ENST00000561189 SLC34A2O95436 690 aa7.77□□□□□ -1.17
CTDSPL2-211ENST00000561189 NBR1Q14596 966 aa7.77□□□□□ -1.17
CTDSPL2-211ENST00000561189 CADPS2Q86UW7 1296 aa7.77□□□□□ -1.17
CTDSPL2-211ENST00000561189 ZSWIM6Q9HCJ5 1215 aa7.76□□□□□ -1.17
CTDSPL2-211ENST00000561189 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
CTDSPL2-211ENST00000561189 HOXB3P14651 431 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-211ENST00000561189 CAMK2BQ13554 666 aa7.73□□□□□ -1.17
CTDSPL2-211ENST00000561189 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
CTDSPL2-211ENST00000561189 DSG2Q14126 1118 aa7.72□□□□□ -1.17
CTDSPL2-211ENST00000561189 PPP1R15BQ5SWA1 713 aa7.72□□□□□ -1.17
CTDSPL2-211ENST00000561189 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
CTDSPL2-211ENST00000561189 DDX27Q96GQ7 796 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-211ENST00000561189 POTEMA6NI47 508 aa7.71□□□□□ -1.18
CTDSPL2-211ENST00000561189 PLPP6Q8IY26 295 aa7.7□□□□□ -1.18
CTDSPL2-211ENST00000561189 WDR70Q9NW82 654 aa7.7□□□□□ -1.18
CTDSPL2-211ENST00000561189 ARIH1Q9Y4X5 557 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL2-211ENST00000561189 RIMBP2O15034 1052 aa7.69□□□□□ -1.18
CTDSPL2-211ENST00000561189 POTEGQ6S5H5 508 aa7.69□□□□□ -1.18
CTDSPL2-211ENST00000561189 PTCD2Q8WV60 388 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-211ENST00000561189 LARP6Q9BRS8 491 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-211ENST00000561189 PCDH10Q9P2E7 1040 aa7.68□□□□□ -1.18
CTDSPL2-211ENST00000561189 OXER1Q8TDS5 423 aa7.67□□□□□ -1.18
CTDSPL2-211ENST00000561189 HOXB1P14653 301 aaPredicted RBP7.66□□□□□ -1.18
CTDSPL2-211ENST00000561189 P3H3Q8IVL6 736 aa7.66□□□□□ -1.18
CTDSPL2-211ENST00000561189 GPR153Q6NV75 609 aa7.65□□□□□ -1.18
CTDSPL2-211ENST00000561189 KDM4FA0A1W2PPD8 638 aa7.64□□□□□ -1.19
CTDSPL2-211ENST00000561189 FAM163AQ96GL9 167 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-211ENST00000561189 ST18O60284 1047 aa7.63□□□□□ -1.19
CTDSPL2-211ENST00000561189 E2F4Q16254 413 aa7.63□□□□□ -1.19
CTDSPL2-211ENST00000561189 TBC1D12O60347 775 aa7.62□□□□□ -1.19
CTDSPL2-211ENST00000561189 ZNF710Q8N1W2 664 aa7.62□□□□□ -1.19
CTDSPL2-211ENST00000561189 PCDHGA4Q9Y5G9 962 aa7.62□□□□□ -1.19
CTDSPL2-211ENST00000561189 EMILIN3Q9NT22 766 aa7.61□□□□□ -1.19
CTDSPL2-211ENST00000561189 TPRNQ4KMQ1 711 aa7.6□□□□□ -1.19
CTDSPL2-211ENST00000561189 ANO8Q9HCE9 1232 aaPredicted RBP7.59□□□□□ -1.19
CTDSPL2-211ENST00000561189 TULP1O00294 542 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-211ENST00000561189 ARHGEF1Q92888 912 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-211ENST00000561189 PSDA5PKW4 1024 aaPredicted RBP7.57□□□□□ -1.2
CTDSPL2-211ENST00000561189 SPDYE16A6NNV3 312 aaPredicted RBP7.57□□□□□ -1.2
CTDSPL2-211ENST00000561189 PDIA6Q15084 440 aa7.56□□□□□ -1.2
CTDSPL2-211ENST00000561189 ARSIQ5FYB1 569 aa7.56□□□□□ -1.2
CTDSPL2-211ENST00000561189 ZNF316A6NFI3 1004 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL2-211ENST00000561189 PTGER2P43116 358 aa7.54□□□□□ -1.2
CTDSPL2-211ENST00000561189 KCNV2Q8TDN2 545 aa7.54□□□□□ -1.2
CTDSPL2-211ENST00000561189 PLSCR2Q9NRY7 297 aa7.54□□□□□ -1.2
CTDSPL2-211ENST00000561189 EVI5O60447 810 aa7.52□□□□□ -1.21
CTDSPL2-211ENST00000561189 PRKCSHP14314 528 aaPredicted RBP7.52□□□□□ -1.21
CTDSPL2-211ENST00000561189 EMP3P54852 163 aa7.52□□□□□ -1.21
CTDSPL2-211ENST00000561189 MAP3K9P80192 1104 aa7.52□□□□□ -1.21
CTDSPL2-211ENST00000561189 DPYSL4O14531 572 aa7.51□□□□□ -1.21
CTDSPL2-211ENST00000561189 NUDT7P0C024 238 aa7.51□□□□□ -1.21
CTDSPL2-211ENST00000561189 UPF1Q92900 1129 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTDSPL2-211ENST00000561189 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.214e-8■■■■■ 38
CTDSPL2-211ENST00000561189 JPH4Q96JJ6 628 aa7.49□□□□□ -1.21
CTDSPL2-211ENST00000561189 FOSBP53539 338 aa7.48□□□□□ -1.21
CTDSPL2-211ENST00000561189 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
CTDSPL2-211ENST00000561189 MARVELD3Q96A59 401 aa7.48□□□□□ -1.21
CTDSPL2-211ENST00000561189 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
CTDSPL2-211ENST00000561189 PHF14O94880 888 aa7.47□□□□□ -1.21
CTDSPL2-211ENST00000561189 PBX2P40425 430 aa7.47□□□□□ -1.21
CTDSPL2-211ENST00000561189 ZNF687Q8N1G0 1237 aa7.47□□□□□ -1.21
CTDSPL2-211ENST00000561189 HS3ST6Q96QI5 342 aa7.47□□□□□ -1.21
CTDSPL2-211ENST00000561189 EPAS1Q99814 870 aa7.46□□□□□ -1.22
CTDSPL2-211ENST00000561189 ERBB3P21860 1342 aa7.46□□□□□ -1.22
CTDSPL2-211ENST00000561189 FBXW7Q969H0 707 aa7.45□□□□□ -1.22
CTDSPL2-211ENST00000561189 POTEB3A0JP26 581 aa7.44□□□□□ -1.22
CTDSPL2-211ENST00000561189 PPP4R3BQ5MIZ7 849 aa7.44□□□□□ -1.22
CTDSPL2-211ENST00000561189 VARS2Q5ST30 1063 aaKnown RBP7.44□□□□□ -1.22
CTDSPL2-211ENST00000561189 POTEBQ6S5H4 581 aa7.44□□□□□ -1.22
CTDSPL2-211ENST00000561189 FAM205CA6NFA0 338 aa7.43□□□□□ -1.22
CTDSPL2-211ENST00000561189 BCL2L12Q9HB09 334 aa7.43□□□□□ -1.22
CTDSPL2-211ENST00000561189 SMYD5Q6GMV2 418 aa7.42□□□□□ -1.22
CTDSPL2-211ENST00000561189 TYW1BQ6NUM6 668 aa7.42□□□□□ -1.22
CTDSPL2-211ENST00000561189 PCDHGA10Q9Y5H3 936 aa7.42□□□□□ -1.22
CTDSPL2-211ENST00000561189 TESPA1A2RU30 521 aaPredicted RBP7.41□□□□□ -1.22
CTDSPL2-211ENST00000561189 ZDHHC16Q969W1 377 aa7.41□□□□□ -1.22
CTDSPL2-211ENST00000561189 ZNF454Q8N9F8 522 aa7.4□□□□□ -1.22
CTDSPL2-211ENST00000561189 SLC4A5Q9BY07 1137 aa7.39□□□□□ -1.23
CTDSPL2-211ENST00000561189 OSBPP22059 807 aa7.38□□□□□ -1.23
CTDSPL2-211ENST00000561189 EN1Q05925 392 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL2-211ENST00000561189 ARHGAP33O14559 1287 aa7.37□□□□□ -1.23
CTDSPL2-211ENST00000561189 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
CTDSPL2-211ENST00000561189 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
CTDSPL2-211ENST00000561189 LMOD2Q6P5Q4 547 aa7.36□□□□□ -1.23
CTDSPL2-211ENST00000561189 POTEEQ6S8J3 1075 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms