RNA–Protein interactions for RNA: ENST00000561078.5

SPG21-213, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-213ENST00000561078 ZMYM4Q5VZL5 1548 aa23.4■■□□□ 1.34
SPG21-213ENST00000561078 POGZQ7Z3K3 1410 aa23.39■■□□□ 1.34
SPG21-213ENST00000561078 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.33
SPG21-213ENST00000561078 MTUS2Q5JR59 1369 aa23.35■■□□□ 1.33
SPG21-213ENST00000561078 ARHGEF40Q8TER5 1519 aa23.34■■□□□ 1.33
SPG21-213ENST00000561078 ZNF518AQ6AHZ1 1483 aa23.33■■□□□ 1.33
SPG21-213ENST00000561078 PREX2Q70Z35 1606 aa23.33■■□□□ 1.32
SPG21-213ENST00000561078 CDC42BPBQ9Y5S2 1711 aa23.32■■□□□ 1.32
SPG21-213ENST00000561078 ZFYVE16Q7Z3T8 1539 aa23.3■■□□□ 1.32
SPG21-213ENST00000561078 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
SPG21-213ENST00000561078 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
SPG21-213ENST00000561078 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
SPG21-213ENST00000561078 YEATS2Q9ULM3 1422 aa23.28■■□□□ 1.32
SPG21-213ENST00000561078 AFAP1Q8N556 730 aa23.28■■□□□ 1.32
SPG21-213ENST00000561078 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.31
SPG21-213ENST00000561078 KDM5CP41229 1560 aa23.26■■□□□ 1.31
SPG21-213ENST00000561078 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
SPG21-213ENST00000561078 EHBP1L1Q8N3D4 1523 aa23.26■■□□□ 1.31
SPG21-213ENST00000561078 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
SPG21-213ENST00000561078 ATP10AO60312 1499 aa23.24■■□□□ 1.31
SPG21-213ENST00000561078 ABCC1P33527 1531 aa23.24■■□□□ 1.31
SPG21-213ENST00000561078 ADAMTSL3P82987 1691 aa23.24■■□□□ 1.31
SPG21-213ENST00000561078 MLH3Q9UHC1 1453 aa23.23■■□□□ 1.31
SPG21-213ENST00000561078 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
SPG21-213ENST00000561078 ARHGEF12Q9NZN5 1544 aa23.21■■□□□ 1.31
SPG21-213ENST00000561078 KIAA1107Q9UPP5 1409 aa23.21■■□□□ 1.31
SPG21-213ENST00000561078 PLEKHH2Q8IVE3 1493 aa23.21■■□□□ 1.31
SPG21-213ENST00000561078 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.31
SPG21-213ENST00000561078 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.31
SPG21-213ENST00000561078 ZNF777Q9ULD5 760 aaPredicted RBP23.2■■□□□ 1.3
SPG21-213ENST00000561078 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
SPG21-213ENST00000561078 TIAM1Q13009 1591 aa23.17■■□□□ 1.3
SPG21-213ENST00000561078 HECW2Q9P2P5 1572 aa23.17■■□□□ 1.3
SPG21-213ENST00000561078 MYT1LQ9UL68 1186 aa23.17■■□□□ 1.3
SPG21-213ENST00000561078 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
SPG21-213ENST00000561078 PTPRMP28827 1452 aa23.16■■□□□ 1.3
SPG21-213ENST00000561078 SAMD9LQ8IVG5 1584 aa23.16■■□□□ 1.3
SPG21-213ENST00000561078 HNRNPMP52272 730 aaKnown RBP eCLIP23.13■■□□□ 1.29
SPG21-213ENST00000561078 REREQ9P2R6 1566 aa23.13■■□□□ 1.29
SPG21-213ENST00000561078 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
SPG21-213ENST00000561078 LRRC9Q6ZRR7 1453 aa23.12■■□□□ 1.29
SPG21-213ENST00000561078 SYCP2Q9BX26 1530 aa23.11■■□□□ 1.29
SPG21-213ENST00000561078 SUPT6HQ7KZ85 1726 aaKnown RBP23.11■■□□□ 1.29
SPG21-213ENST00000561078 MADDQ8WXG6 1647 aa23.1■■□□□ 1.29
SPG21-213ENST00000561078 DIP2CQ9Y2E4 1556 aa23.1■■□□□ 1.29
SPG21-213ENST00000561078 SPAG9O60271 1321 aaKnown RBP23.1■■□□□ 1.29
SPG21-213ENST00000561078 SIGLEC1Q9BZZ2 1709 aa23.09■■□□□ 1.29
SPG21-213ENST00000561078 APLP2Q06481 763 aa23.08■■□□□ 1.28
SPG21-213ENST00000561078 AGLP35573 1532 aa23.07■■□□□ 1.28
SPG21-213ENST00000561078 RSPH4AQ5TD94 716 aa23.07■■□□□ 1.28
SPG21-213ENST00000561078 MLECQ14165 292 aa23.06■■□□□ 1.28
SPG21-213ENST00000561078 ZNF644Q9H582 1327 aaPredicted RBP23.06■■□□□ 1.28
SPG21-213ENST00000561078 KIDINS220Q9ULH0 1771 aa23.06■■□□□ 1.28
SPG21-213ENST00000561078 ABCA6Q8N139 1617 aa23.05■■□□□ 1.28
SPG21-213ENST00000561078 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
SPG21-213ENST00000561078 KANK4Q5T7N3 995 aaPredicted RBP23.03■■□□□ 1.28
SPG21-213ENST00000561078 RTEL1-TNFRSF6BF6WH68 1400 aa23.01■■□□□ 1.27
SPG21-213ENST00000561078 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
SPG21-213ENST00000561078 RIMS1Q86UR5 1692 aaKnown RBP23.01■■□□□ 1.27
SPG21-213ENST00000561078 ATP7AQ04656 1500 aa23■■□□□ 1.27
SPG21-213ENST00000561078 INO80Q9ULG1 1556 aaPredicted RBP22.98■■□□□ 1.27
SPG21-213ENST00000561078 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
SPG21-213ENST00000561078 MIA2Q96PC5 1412 aa22.97■■□□□ 1.27
SPG21-213ENST00000561078 CAMSAP2Q08AD1 1489 aa22.96■■□□□ 1.27
SPG21-213ENST00000561078 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
SPG21-213ENST00000561078 CCDC141Q6ZP82 1450 aa22.94■■□□□ 1.26
SPG21-213ENST00000561078 MYOM3Q5VTT5 1437 aa22.94■■□□□ 1.26
SPG21-213ENST00000561078 A2MP01023 1474 aa22.93■■□□□ 1.26
SPG21-213ENST00000561078 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
SPG21-213ENST00000561078 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
SPG21-213ENST00000561078 ARHGEF5Q12774 1597 aa22.91■■□□□ 1.26
SPG21-213ENST00000561078 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
SPG21-213ENST00000561078 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
SPG21-213ENST00000561078 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
SPG21-213ENST00000561078 PPP6R1Q9UPN7 881 aa22.9■■□□□ 1.26
SPG21-213ENST00000561078 PLXNC1O60486 1568 aa22.9■■□□□ 1.26
SPG21-213ENST00000561078 DHX29Q7Z478 1369 aaKnown RBP22.88■■□□□ 1.25
SPG21-213ENST00000561078 LMTK3Q96Q04 1460 aa22.87■■□□□ 1.25
SPG21-213ENST00000561078 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
SPG21-213ENST00000561078 CEBPAP49715 358 aaPredicted RBP22.85■■□□□ 1.25
SPG21-213ENST00000561078 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
SPG21-213ENST00000561078 GGT6Q6P531 493 aa22.8■■□□□ 1.24
SPG21-213ENST00000561078 MAST1Q9Y2H9 1570 aa22.79■■□□□ 1.24
SPG21-213ENST00000561078 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
SPG21-213ENST00000561078 MROH2AA6NES4 1674 aa22.76■■□□□ 1.23
SPG21-213ENST00000561078 FGD6Q6ZV73 1430 aa22.76■■□□□ 1.23
SPG21-213ENST00000561078 C3P01024 1663 aa22.76■■□□□ 1.23
SPG21-213ENST00000561078 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
SPG21-213ENST00000561078 KIF3BO15066 747 aa22.75■■□□□ 1.23
SPG21-213ENST00000561078 NPATQ14207 1427 aa22.75■■□□□ 1.23
SPG21-213ENST00000561078 TCOF1Q13428 1488 aaKnown RBP22.74■■□□□ 1.23
SPG21-213ENST00000561078 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
SPG21-213ENST00000561078 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
SPG21-213ENST00000561078 HSPA2P54652 639 aa22.73■■□□□ 1.23
SPG21-213ENST00000561078 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
SPG21-213ENST00000561078 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
SPG21-213ENST00000561078 SHANK2Q9UPX8 1470 aa22.71■■□□□ 1.23
SPG21-213ENST00000561078 ABCC5O15440 1437 aa22.7■■□□□ 1.23
SPG21-213ENST00000561078 CLTCQ00610 1675 aaKnown RBP22.67■■□□□ 1.22
SPG21-213ENST00000561078 DAPK1P53355 1430 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms