RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 KIF3CO14782 793 aa10.26□□□□□ -0.77
TMOD3-207ENST00000560549 GTPBP6O43824 516 aaPredicted RBP10.21□□□□□ -0.78
TMOD3-207ENST00000560549 DOK7Q18PE1 504 aa10.21□□□□□ -0.78
TMOD3-207ENST00000560549 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
TMOD3-207ENST00000560549 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
TMOD3-207ENST00000560549 C2orf72A6NCS6 295 aa10.17□□□□□ -0.78
TMOD3-207ENST00000560549 ZSWIM6Q9HCJ5 1215 aa10.17□□□□□ -0.78
TMOD3-207ENST00000560549 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
TMOD3-207ENST00000560549 CDAN1Q8IWY9 1227 aa10.15□□□□□ -0.78
TMOD3-207ENST00000560549 EMP3P54852 163 aa10.14□□□□□ -0.79
TMOD3-207ENST00000560549 RIMBP2O15034 1052 aa10.13□□□□□ -0.79
TMOD3-207ENST00000560549 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
TMOD3-207ENST00000560549 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
TMOD3-207ENST00000560549 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
TMOD3-207ENST00000560549 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
TMOD3-207ENST00000560549 BBXQ8WY36 941 aaPredicted RBP10.12□□□□□ -0.79
TMOD3-207ENST00000560549 SLC34A2O95436 690 aa10.1□□□□□ -0.79
TMOD3-207ENST00000560549 TMC2Q8TDI7 906 aa10.1□□□□□ -0.79
TMOD3-207ENST00000560549 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
TMOD3-207ENST00000560549 GPHNQ9NQX3 736 aaPredicted RBP10.09□□□□□ -0.79
TMOD3-207ENST00000560549 FOXK1P85037 733 aa10.07□□□□□ -0.8
TMOD3-207ENST00000560549 FAM205CA6NFA0 338 aa10.06□□□□□ -0.8
TMOD3-207ENST00000560549 CRISPLD2Q9H0B8 497 aa10.05□□□□□ -0.8
TMOD3-207ENST00000560549 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
TMOD3-207ENST00000560549 CADPS2Q86UW7 1296 aa10.04□□□□□ -0.8
TMOD3-207ENST00000560549 DSG2Q14126 1118 aa10.02□□□□□ -0.81
TMOD3-207ENST00000560549 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
TMOD3-207ENST00000560549 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
TMOD3-207ENST00000560549 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
TMOD3-207ENST00000560549 NCKAP5LQ9HCH0 1330 aa10.01□□□□□ -0.81
TMOD3-207ENST00000560549 PLPP6Q8IY26 295 aa10.01□□□□□ -0.81
TMOD3-207ENST00000560549 PTCD2Q8WV60 388 aaKnown RBP10□□□□□ -0.81
TMOD3-207ENST00000560549 KHSRPQ92945 711 aaKnown RBP eCLIP10□□□□□ -0.81
TMOD3-207ENST00000560549 PCDHGA4Q9Y5G9 962 aa10□□□□□ -0.81
TMOD3-207ENST00000560549 ERBB3P21860 1342 aa10□□□□□ -0.81
TMOD3-207ENST00000560549 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
TMOD3-207ENST00000560549 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
TMOD3-207ENST00000560549 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
TMOD3-207ENST00000560549 VARS2Q5ST30 1063 aaKnown RBP9.98□□□□□ -0.81
TMOD3-207ENST00000560549 SPRYD3Q8NCJ5 442 aa9.98□□□□□ -0.81
TMOD3-207ENST00000560549 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
TMOD3-207ENST00000560549 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
TMOD3-207ENST00000560549 PDE4AP27815 886 aa9.95□□□□□ -0.82
TMOD3-207ENST00000560549 ZNF687Q8N1G0 1237 aa9.95□□□□□ -0.82
TMOD3-207ENST00000560549 NUDT7P0C024 238 aa9.94□□□□□ -0.82
TMOD3-207ENST00000560549 MFSD10Q14728 455 aa9.94□□□□□ -0.82
TMOD3-207ENST00000560549 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
TMOD3-207ENST00000560549 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
TMOD3-207ENST00000560549 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
TMOD3-207ENST00000560549 LHX6Q9UPM6 363 aa9.91□□□□□ -0.82
TMOD3-207ENST00000560549 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
TMOD3-207ENST00000560549 DDX27Q96GQ7 796 aaKnown RBP9.87□□□□□ -0.83
TMOD3-207ENST00000560549 TBC1D12O60347 775 aa9.85□□□□□ -0.83
TMOD3-207ENST00000560549 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
TMOD3-207ENST00000560549 PSDA5PKW4 1024 aaPredicted RBP9.85□□□□□ -0.83
TMOD3-207ENST00000560549 POTEEQ6S8J3 1075 aa9.85□□□□□ -0.83
TMOD3-207ENST00000560549 TSHZ2Q9NRE2 1034 aa9.84□□□□□ -0.83
TMOD3-207ENST00000560549 PBX2P40425 430 aa9.82□□□□□ -0.84
TMOD3-207ENST00000560549 CAMK2BQ13554 666 aa9.81□□□□□ -0.84
TMOD3-207ENST00000560549 UPF1Q92900 1129 aaKnown RBP eCLIP9.81□□□□□ -0.842e-8■□□□□ 8.8
TMOD3-207ENST00000560549 ANO8Q9HCE9 1232 aaPredicted RBP9.81□□□□□ -0.84
TMOD3-207ENST00000560549 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
TMOD3-207ENST00000560549 PLCB2Q00722 1185 aa9.8□□□□□ -0.84
TMOD3-207ENST00000560549 LSM11P83369 360 aaKnown RBP eCLIP9.77□□□□□ -0.85
TMOD3-207ENST00000560549 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
TMOD3-207ENST00000560549 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
TMOD3-207ENST00000560549 EVI5O60447 810 aa9.73□□□□□ -0.85
TMOD3-207ENST00000560549 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
TMOD3-207ENST00000560549 FOSBP53539 338 aa9.73□□□□□ -0.85
TMOD3-207ENST00000560549 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
TMOD3-207ENST00000560549 PTGER2P43116 358 aa9.72□□□□□ -0.85
TMOD3-207ENST00000560549 MAP3K9P80192 1104 aa9.71□□□□□ -0.86
TMOD3-207ENST00000560549 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
TMOD3-207ENST00000560549 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
TMOD3-207ENST00000560549 TK2O00142 265 aa9.68□□□□□ -0.86
TMOD3-207ENST00000560549 DPYSL4O14531 572 aa9.68□□□□□ -0.86
TMOD3-207ENST00000560549 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
TMOD3-207ENST00000560549 BCL2L12Q9HB09 334 aa9.68□□□□□ -0.86
TMOD3-207ENST00000560549 PSEN2P49810 448 aa9.67□□□□□ -0.86
TMOD3-207ENST00000560549 DMRTA1Q5VZB9 504 aa9.67□□□□□ -0.86
TMOD3-207ENST00000560549 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
TMOD3-207ENST00000560549 ARIH1Q9Y4X5 557 aaPredicted RBP9.66□□□□□ -0.86
TMOD3-207ENST00000560549 ADGRD1Q6QNK2 874 aa9.66□□□□□ -0.86
TMOD3-207ENST00000560549 E2F4Q16254 413 aa9.65□□□□□ -0.87
TMOD3-207ENST00000560549 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.87
TMOD3-207ENST00000560549 HRO43593 1189 aa9.64□□□□□ -0.87
TMOD3-207ENST00000560549 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
TMOD3-207ENST00000560549 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
TMOD3-207ENST00000560549 PCDHGA10Q9Y5H3 936 aa9.64□□□□□ -0.87
TMOD3-207ENST00000560549 HAP1P54257 671 aaPredicted RBP9.63□□□□□ -0.87
TMOD3-207ENST00000560549 PDIA6Q15084 440 aa9.62□□□□□ -0.87
TMOD3-207ENST00000560549 KCNK17Q96T54 332 aa9.62□□□□□ -0.87
TMOD3-207ENST00000560549 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
TMOD3-207ENST00000560549 PHF14O94880 888 aa9.61□□□□□ -0.87
TMOD3-207ENST00000560549 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
TMOD3-207ENST00000560549 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
TMOD3-207ENST00000560549 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
TMOD3-207ENST00000560549 PTPREP23469 700 aa9.59□□□□□ -0.87
TMOD3-207ENST00000560549 TYW1BQ6NUM6 668 aa9.59□□□□□ -0.87
TMOD3-207ENST00000560549 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms