RNA–Protein interactions for RNA: ENST00000560056.1

AC040918.1-201, humanhuman

TSL 2 BASIC

Gene AC040918.1, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040918.1-201ENST00000560056 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
AC040918.1-201ENST00000560056 FBXO3Q9UK99 471 aa11.8□□□□□ -0.52
AC040918.1-201ENST00000560056 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
AC040918.1-201ENST00000560056 EIF4G1Q04637 1599 aaKnown RBP11.78□□□□□ -0.52
AC040918.1-201ENST00000560056 FKBP8Q14318 412 aa11.72□□□□□ -0.53
AC040918.1-201ENST00000560056 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
AC040918.1-201ENST00000560056 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.54
AC040918.1-201ENST00000560056 GPR153Q6NV75 609 aa11.63□□□□□ -0.55
AC040918.1-201ENST00000560056 LSM11P83369 360 aaKnown RBP eCLIP11.62□□□□□ -0.55
AC040918.1-201ENST00000560056 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
AC040918.1-201ENST00000560056 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
AC040918.1-201ENST00000560056 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
AC040918.1-201ENST00000560056 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
AC040918.1-201ENST00000560056 ARSIQ5FYB1 569 aa11.55□□□□□ -0.56
AC040918.1-201ENST00000560056 CIZ1Q9ULV3 898 aaPredicted RBP11.55□□□□□ -0.56
AC040918.1-201ENST00000560056 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
AC040918.1-201ENST00000560056 PBX2P40425 430 aa11.53□□□□□ -0.56
AC040918.1-201ENST00000560056 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
AC040918.1-201ENST00000560056 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.57
AC040918.1-201ENST00000560056 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
AC040918.1-201ENST00000560056 CUX2O14529 1486 aa11.43□□□□□ -0.58
AC040918.1-201ENST00000560056 SOX12O15370 315 aa11.42□□□□□ -0.58
AC040918.1-201ENST00000560056 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
AC040918.1-201ENST00000560056 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
AC040918.1-201ENST00000560056 ERCC6Q03468 1493 aa11.4□□□□□ -0.58
AC040918.1-201ENST00000560056 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
AC040918.1-201ENST00000560056 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
AC040918.1-201ENST00000560056 NUDT7P0C024 238 aa11.35□□□□□ -0.59
AC040918.1-201ENST00000560056 ADGRD1Q6QNK2 874 aa11.35□□□□□ -0.59
AC040918.1-201ENST00000560056 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
AC040918.1-201ENST00000560056 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
AC040918.1-201ENST00000560056 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
AC040918.1-201ENST00000560056 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
AC040918.1-201ENST00000560056 LHX6Q9UPM6 363 aa11.31□□□□□ -0.6
AC040918.1-201ENST00000560056 PHF8Q9UPP1 1060 aa11.3□□□□□ -0.6
AC040918.1-201ENST00000560056 RGS20O76081 388 aa11.29□□□□□ -0.6
AC040918.1-201ENST00000560056 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
AC040918.1-201ENST00000560056 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
AC040918.1-201ENST00000560056 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
AC040918.1-201ENST00000560056 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
AC040918.1-201ENST00000560056 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
AC040918.1-201ENST00000560056 SMARCA4P51532 1647 aa11.26□□□□□ -0.61
AC040918.1-201ENST00000560056 BAZ1AQ9NRL2 1556 aaPredicted RBP11.25□□□□□ -0.61
AC040918.1-201ENST00000560056 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
AC040918.1-201ENST00000560056 TK2O00142 265 aa11.24□□□□□ -0.61
AC040918.1-201ENST00000560056 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
AC040918.1-201ENST00000560056 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
AC040918.1-201ENST00000560056 NLRP6P59044 892 aa11.23□□□□□ -0.61
AC040918.1-201ENST00000560056 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
AC040918.1-201ENST00000560056 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
AC040918.1-201ENST00000560056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
AC040918.1-201ENST00000560056 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
AC040918.1-201ENST00000560056 SLC34A2O95436 690 aa11.2□□□□□ -0.62
AC040918.1-201ENST00000560056 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
AC040918.1-201ENST00000560056 C2orf72A6NCS6 295 aa11.18□□□□□ -0.62
AC040918.1-201ENST00000560056 PEG3Q9GZU2 1588 aa11.18□□□□□ -0.62
AC040918.1-201ENST00000560056 LAMC3Q9Y6N6 1575 aa11.18□□□□□ -0.62
AC040918.1-201ENST00000560056 NESP48681 1621 aa11.17□□□□□ -0.62
AC040918.1-201ENST00000560056 PDS5BQ9NTI5 1447 aa11.17□□□□□ -0.62
AC040918.1-201ENST00000560056 KIF3CO14782 793 aa11.16□□□□□ -0.62
AC040918.1-201ENST00000560056 HRO43593 1189 aa11.16□□□□□ -0.62
AC040918.1-201ENST00000560056 KCNH8Q96L42 1107 aa11.15□□□□□ -0.62
AC040918.1-201ENST00000560056 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
AC040918.1-201ENST00000560056 IFFO2Q5TF58 517 aa11.12□□□□□ -0.63
AC040918.1-201ENST00000560056 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
AC040918.1-201ENST00000560056 PTPN5P54829 565 aa11.11□□□□□ -0.63
AC040918.1-201ENST00000560056 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
AC040918.1-201ENST00000560056 PSEN2P49810 448 aa11.1□□□□□ -0.63
AC040918.1-201ENST00000560056 DMRTA1Q5VZB9 504 aa11.1□□□□□ -0.63
AC040918.1-201ENST00000560056 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
AC040918.1-201ENST00000560056 FBXO22Q8NEZ5 403 aa11.09□□□□□ -0.63
AC040918.1-201ENST00000560056 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
AC040918.1-201ENST00000560056 A0A0G2JS52 829 aa11.08□□□□□ -0.64
AC040918.1-201ENST00000560056 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
AC040918.1-201ENST00000560056 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
AC040918.1-201ENST00000560056 WIZO95785 1651 aa11.04□□□□□ -0.64
AC040918.1-201ENST00000560056 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
AC040918.1-201ENST00000560056 Q6ZNB5 142 aa11.03□□□□□ -0.64
AC040918.1-201ENST00000560056 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
AC040918.1-201ENST00000560056 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
AC040918.1-201ENST00000560056 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
AC040918.1-201ENST00000560056 KCNK17Q96T54 332 aa11.01□□□□□ -0.65
AC040918.1-201ENST00000560056 STK24Q9Y6E0 443 aa11□□□□□ -0.65
AC040918.1-201ENST00000560056 MFRPQ9BY79 579 aa10.99□□□□□ -0.65
AC040918.1-201ENST00000560056 GOLGA8CPA6NN73 597 aa10.98□□□□□ -0.65
AC040918.1-201ENST00000560056 WDR62O43379 1518 aa10.98□□□□□ -0.65
AC040918.1-201ENST00000560056 CEP164Q9UPV0 1460 aa10.97□□□□□ -0.65
AC040918.1-201ENST00000560056 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
AC040918.1-201ENST00000560056 PTCD2Q8WV60 388 aaKnown RBP10.95□□□□□ -0.66
AC040918.1-201ENST00000560056 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
AC040918.1-201ENST00000560056 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
AC040918.1-201ENST00000560056 TBC1D12O60347 775 aa10.94□□□□□ -0.66
AC040918.1-201ENST00000560056 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
AC040918.1-201ENST00000560056 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
AC040918.1-201ENST00000560056 WNT2BQ93097 391 aa10.91□□□□□ -0.66
AC040918.1-201ENST00000560056 CFTRP13569 1480 aa10.89□□□□□ -0.67
AC040918.1-201ENST00000560056 STK25O00506 426 aa10.89□□□□□ -0.67
AC040918.1-201ENST00000560056 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
AC040918.1-201ENST00000560056 SLC4A5Q9BY07 1137 aa10.87□□□□□ -0.67
AC040918.1-201ENST00000560056 TOP2AP11388 1531 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms