RNA–Protein interactions for RNA: ENST00000559978.1

CD276-208, Transcript of CD276 molecule, humanhuman

TSL 2

Gene CD276, Length 503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD276-208ENST00000559978 LTBP4Q8N2S1 1624 aa17.99■□□□□ 0.47
CD276-208ENST00000559978 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
CD276-208ENST00000559978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
CD276-208ENST00000559978 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
CD276-208ENST00000559978 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
CD276-208ENST00000559978 ATP10AO60312 1499 aa17.89■□□□□ 0.45
CD276-208ENST00000559978 MED1Q15648 1581 aaPredicted RBP17.89■□□□□ 0.45
CD276-208ENST00000559978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
CD276-208ENST00000559978 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
CD276-208ENST00000559978 C3P01024 1663 aa17.88■□□□□ 0.45
CD276-208ENST00000559978 CEBPAP49715 358 aaPredicted RBP17.88■□□□□ 0.45
CD276-208ENST00000559978 UBAP1LF5GYI3 381 aa17.85■□□□□ 0.45
CD276-208ENST00000559978 NUP153P49790 1475 aaKnown RBP17.85■□□□□ 0.45
CD276-208ENST00000559978 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
CD276-208ENST00000559978 NCOA1Q15788 1441 aa17.84■□□□□ 0.45
CD276-208ENST00000559978 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
CD276-208ENST00000559978 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
CD276-208ENST00000559978 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
CD276-208ENST00000559978 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
CD276-208ENST00000559978 SUPT6HQ7KZ85 1726 aaKnown RBP17.78■□□□□ 0.44
CD276-208ENST00000559978 CAMSAP1Q5T5Y3 1602 aa17.77■□□□□ 0.44
CD276-208ENST00000559978 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.44
CD276-208ENST00000559978 REREQ9P2R6 1566 aa17.77■□□□□ 0.44
CD276-208ENST00000559978 ESF1Q9H501 851 aaKnown RBP17.76■□□□□ 0.43
CD276-208ENST00000559978 ZNF518AQ6AHZ1 1483 aa17.75■□□□□ 0.43
CD276-208ENST00000559978 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
CD276-208ENST00000559978 PLCH2O75038 1416 aa17.72■□□□□ 0.43
CD276-208ENST00000559978 KDM5CP41229 1560 aa17.72■□□□□ 0.43
CD276-208ENST00000559978 DIP2CQ9Y2E4 1556 aa17.72■□□□□ 0.43
CD276-208ENST00000559978 AGLP35573 1532 aa17.71■□□□□ 0.43
CD276-208ENST00000559978 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
CD276-208ENST00000559978 CNTLNQ9NXG0 1405 aa17.7■□□□□ 0.42
CD276-208ENST00000559978 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
CD276-208ENST00000559978 ZNF142P52746 1687 aaPredicted RBP17.69■□□□□ 0.42
CD276-208ENST00000559978 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
CD276-208ENST00000559978 ABCA6Q8N139 1617 aa17.68■□□□□ 0.42
CD276-208ENST00000559978 MYT1LQ9UL68 1186 aa17.67■□□□□ 0.42
CD276-208ENST00000559978 NPATQ14207 1427 aa17.66■□□□□ 0.42
CD276-208ENST00000559978 HSPA1LP34931 641 aa17.66■□□□□ 0.42
CD276-208ENST00000559978 PLA2R1Q13018 1463 aa17.66■□□□□ 0.42
CD276-208ENST00000559978 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
CD276-208ENST00000559978 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
CD276-208ENST00000559978 TOM1O60784 492 aa17.63■□□□□ 0.41
CD276-208ENST00000559978 PKD2Q13563 968 aa17.63■□□□□ 0.41
CD276-208ENST00000559978 PIP4K2BP78356 416 aa17.61■□□□□ 0.41
CD276-208ENST00000559978 NCKAP5LQ9HCH0 1330 aa17.61■□□□□ 0.41
CD276-208ENST00000559978 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
CD276-208ENST00000559978 CDK13Q14004 1512 aaKnown RBP17.61■□□□□ 0.41
CD276-208ENST00000559978 CPS1P31327 1500 aa17.6■□□□□ 0.41
CD276-208ENST00000559978 KIF14Q15058 1648 aa17.59■□□□□ 0.41
CD276-208ENST00000559978 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
CD276-208ENST00000559978 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
CD276-208ENST00000559978 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
CD276-208ENST00000559978 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
CD276-208ENST00000559978 POLR1AO95602 1720 aaPredicted RBP17.57■□□□□ 0.4
CD276-208ENST00000559978 AFAP1Q8N556 730 aa17.55■□□□□ 0.4
CD276-208ENST00000559978 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
CD276-208ENST00000559978 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
CD276-208ENST00000559978 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
CD276-208ENST00000559978 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.4
CD276-208ENST00000559978 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.39
CD276-208ENST00000559978 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
CD276-208ENST00000559978 ZMYM3Q14202 1370 aa17.5■□□□□ 0.39
CD276-208ENST00000559978 ABCC1P33527 1531 aa17.49■□□□□ 0.39
CD276-208ENST00000559978 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
CD276-208ENST00000559978 CLIP1P30622 1438 aa17.47■□□□□ 0.39
CD276-208ENST00000559978 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
CD276-208ENST00000559978 SHANK2Q9UPX8 1470 aa17.47■□□□□ 0.39
CD276-208ENST00000559978 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
CD276-208ENST00000559978 TROQ12816 1431 aaPredicted RBP17.43■□□□□ 0.38
CD276-208ENST00000559978 A2ML1A8K2U0 1454 aa17.43■□□□□ 0.38
CD276-208ENST00000559978 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
CD276-208ENST00000559978 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
CD276-208ENST00000559978 ALKQ9UM73 1620 aa17.42■□□□□ 0.38
CD276-208ENST00000559978 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
CD276-208ENST00000559978 SYNMO15061 1565 aa17.39■□□□□ 0.37
CD276-208ENST00000559978 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
CD276-208ENST00000559978 VWDEQ8N2E2 1590 aa17.38■□□□□ 0.37
CD276-208ENST00000559978 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
CD276-208ENST00000559978 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
CD276-208ENST00000559978 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
CD276-208ENST00000559978 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
CD276-208ENST00000559978 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
CD276-208ENST00000559978 RGS17Q9UGC6 210 aaPredicted RBP17.34■□□□□ 0.37
CD276-208ENST00000559978 SETD1AO15047 1707 aaKnown RBP17.33■□□□□ 0.37
CD276-208ENST00000559978 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
CD276-208ENST00000559978 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
CD276-208ENST00000559978 ATP7AQ04656 1500 aa17.32■□□□□ 0.36
CD276-208ENST00000559978 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
CD276-208ENST00000559978 EEA1Q15075 1411 aa17.3■□□□□ 0.36
CD276-208ENST00000559978 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
CD276-208ENST00000559978 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
CD276-208ENST00000559978 A2MP01023 1474 aa17.3■□□□□ 0.36
CD276-208ENST00000559978 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
CD276-208ENST00000559978 SYCP2Q9BX26 1530 aa17.29■□□□□ 0.36
CD276-208ENST00000559978 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
CD276-208ENST00000559978 MED14O60244 1454 aa17.27■□□□□ 0.36
CD276-208ENST00000559978 ANKLE2Q86XL3 938 aa17.27■□□□□ 0.36
CD276-208ENST00000559978 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.35
CD276-208ENST00000559978 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms