RNA–Protein interactions for RNA: ENST00000559741.5

PSME1-206, Transcript of proteasome activator subunit 1, humanhuman

TSL 3

Gene PSME1, Length 763 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-206ENST00000559741 ADGRL1O94910 1474 aa15.94■□□□□ 0.14
PSME1-206ENST00000559741 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
PSME1-206ENST00000559741 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
PSME1-206ENST00000559741 SCAPERQ9BY12 1400 aa15.92■□□□□ 0.14
PSME1-206ENST00000559741 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
PSME1-206ENST00000559741 ZMYM4Q5VZL5 1548 aa15.91■□□□□ 0.14
PSME1-206ENST00000559741 TIAM1Q13009 1591 aa15.9■□□□□ 0.14
PSME1-206ENST00000559741 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
PSME1-206ENST00000559741 POGZQ7Z3K3 1410 aa15.89■□□□□ 0.13
PSME1-206ENST00000559741 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
PSME1-206ENST00000559741 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
PSME1-206ENST00000559741 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
PSME1-206ENST00000559741 ZNF518AQ6AHZ1 1483 aa15.86■□□□□ 0.13
PSME1-206ENST00000559741 CCNB3Q8WWL7 1395 aa15.86■□□□□ 0.13
PSME1-206ENST00000559741 ABCC1P33527 1531 aa15.85■□□□□ 0.13
PSME1-206ENST00000559741 ARHGEF40Q8TER5 1519 aa15.85■□□□□ 0.13
PSME1-206ENST00000559741 KDM5CP41229 1560 aa15.84■□□□□ 0.13
PSME1-206ENST00000559741 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
PSME1-206ENST00000559741 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
PSME1-206ENST00000559741 ZFYVE16Q7Z3T8 1539 aa15.83■□□□□ 0.12
PSME1-206ENST00000559741 ITSN2Q9NZM3 1697 aa15.83■□□□□ 0.12
PSME1-206ENST00000559741 SAMD9LQ8IVG5 1584 aa15.82■□□□□ 0.12
PSME1-206ENST00000559741 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
PSME1-206ENST00000559741 PLEKHH2Q8IVE3 1493 aa15.81■□□□□ 0.12
PSME1-206ENST00000559741 ARHGEF12Q9NZN5 1544 aa15.81■□□□□ 0.12
PSME1-206ENST00000559741 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
PSME1-206ENST00000559741 KIAA1107Q9UPP5 1409 aa15.81■□□□□ 0.12
PSME1-206ENST00000559741 YEATS2Q9ULM3 1422 aa15.8■□□□□ 0.12
PSME1-206ENST00000559741 AFAP1Q8N556 730 aa15.79■□□□□ 0.12
PSME1-206ENST00000559741 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
PSME1-206ENST00000559741 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
PSME1-206ENST00000559741 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
PSME1-206ENST00000559741 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
PSME1-206ENST00000559741 SYCP2Q9BX26 1530 aa15.77■□□□□ 0.11
PSME1-206ENST00000559741 APLP2Q06481 763 aa15.76■□□□□ 0.11
PSME1-206ENST00000559741 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
PSME1-206ENST00000559741 ATP10AO60312 1499 aa15.76■□□□□ 0.11
PSME1-206ENST00000559741 BCORL1Q5H9F3 1711 aa15.75■□□□□ 0.11
PSME1-206ENST00000559741 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
PSME1-206ENST00000559741 ADAMTSL3P82987 1691 aa15.74■□□□□ 0.11
PSME1-206ENST00000559741 REREQ9P2R6 1566 aa15.74■□□□□ 0.11
PSME1-206ENST00000559741 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.11
PSME1-206ENST00000559741 DIP2CQ9Y2E4 1556 aa15.73■□□□□ 0.11
PSME1-206ENST00000559741 KIDINS220Q9ULH0 1771 aa15.72■□□□□ 0.11
PSME1-206ENST00000559741 ARID4BQ4LE39 1312 aaPredicted RBP15.72■□□□□ 0.11
PSME1-206ENST00000559741 MBD5Q9P267 1494 aa15.71■□□□□ 0.11
PSME1-206ENST00000559741 SIGLEC1Q9BZZ2 1709 aa15.71■□□□□ 0.11
PSME1-206ENST00000559741 ABCA6Q8N139 1617 aa15.71■□□□□ 0.11
PSME1-206ENST00000559741 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
PSME1-206ENST00000559741 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
PSME1-206ENST00000559741 SPAG9O60271 1321 aaKnown RBP15.69■□□□□ 0.1
PSME1-206ENST00000559741 MIA2Q96PC5 1412 aa15.69■□□□□ 0.1
PSME1-206ENST00000559741 RSPH4AQ5TD94 716 aa15.69■□□□□ 0.1
PSME1-206ENST00000559741 CAMSAP2Q08AD1 1489 aa15.69■□□□□ 0.1
PSME1-206ENST00000559741 MYOM3Q5VTT5 1437 aa15.68■□□□□ 0.1
PSME1-206ENST00000559741 INO80Q9ULG1 1556 aaPredicted RBP15.68■□□□□ 0.1
PSME1-206ENST00000559741 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
PSME1-206ENST00000559741 MADDQ8WXG6 1647 aa15.67■□□□□ 0.1
PSME1-206ENST00000559741 AGLP35573 1532 aa15.67■□□□□ 0.1
PSME1-206ENST00000559741 ARHGEF5Q12774 1597 aa15.66■□□□□ 0.1
PSME1-206ENST00000559741 RTEL1-TNFRSF6BF6WH68 1400 aa15.66■□□□□ 0.1
PSME1-206ENST00000559741 PTPRMP28827 1452 aa15.65■□□□□ 0.1
PSME1-206ENST00000559741 CCDC141Q6ZP82 1450 aa15.65■□□□□ 0.1
PSME1-206ENST00000559741 ILDR1Q86SU0 546 aaPredicted RBP15.65■□□□□ 0.1
PSME1-206ENST00000559741 RIMS1Q86UR5 1692 aaKnown RBP15.61■□□□□ 0.09
PSME1-206ENST00000559741 ADGBQ8N7X0 1667 aa15.61■□□□□ 0.09
PSME1-206ENST00000559741 FER1L4A9Z1Z3 1794 aa15.61■□□□□ 0.09
PSME1-206ENST00000559741 PLXNC1O60486 1568 aa15.61■□□□□ 0.09
PSME1-206ENST00000559741 MLECQ14165 292 aa15.6■□□□□ 0.09
PSME1-206ENST00000559741 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
PSME1-206ENST00000559741 A2MP01023 1474 aa15.59■□□□□ 0.09
PSME1-206ENST00000559741 TSPY4P0CV99 314 aa15.59■□□□□ 0.09
PSME1-206ENST00000559741 TSPY10P0CW01 314 aa15.59■□□□□ 0.09
PSME1-206ENST00000559741 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
PSME1-206ENST00000559741 PTPN23Q9H3S7 1636 aa15.58■□□□□ 0.09
PSME1-206ENST00000559741 FGD6Q6ZV73 1430 aa15.58■□□□□ 0.08
PSME1-206ENST00000559741 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
PSME1-206ENST00000559741 DHX29Q7Z478 1369 aaKnown RBP15.56■□□□□ 0.08
PSME1-206ENST00000559741 SHANK2Q9UPX8 1470 aa15.52■□□□□ 0.08
PSME1-206ENST00000559741 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.08
PSME1-206ENST00000559741 CROCC2H7BZ55 1655 aa15.52■□□□□ 0.08
PSME1-206ENST00000559741 PPP6R1Q9UPN7 881 aa15.52■□□□□ 0.08
PSME1-206ENST00000559741 DNMT1P26358 1616 aaKnown RBP15.51■□□□□ 0.07
PSME1-206ENST00000559741 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
PSME1-206ENST00000559741 ABCC5O15440 1437 aa15.51■□□□□ 0.07
PSME1-206ENST00000559741 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
PSME1-206ENST00000559741 MROH2AA6NES4 1674 aa15.5■□□□□ 0.07
PSME1-206ENST00000559741 DAPK1P53355 1430 aa15.5■□□□□ 0.07
PSME1-206ENST00000559741 C3P01024 1663 aa15.48■□□□□ 0.07
PSME1-206ENST00000559741 GGT6Q6P531 493 aa15.47■□□□□ 0.07
PSME1-206ENST00000559741 FAM135AQ9P2D6 1515 aa15.47■□□□□ 0.07
PSME1-206ENST00000559741 EIF2AK4Q9P2K8 1649 aaKnown RBP15.46■□□□□ 0.07
PSME1-206ENST00000559741 KIF3BO15066 747 aa15.46■□□□□ 0.07
PSME1-206ENST00000559741 DUOX2Q9NRD8 1548 aa15.45■□□□□ 0.06
PSME1-206ENST00000559741 CEBPAP49715 358 aaPredicted RBP15.45■□□□□ 0.06
PSME1-206ENST00000559741 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
PSME1-206ENST00000559741 SETD1BQ9UPS6 1966 aaKnown RBP15.45■□□□□ 0.06
PSME1-206ENST00000559741 LMTK3Q96Q04 1460 aa15.45■□□□□ 0.06
PSME1-206ENST00000559741 CLTCQ00610 1675 aaKnown RBP15.44■□□□□ 0.06
PSME1-206ENST00000559741 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms