RNA–Protein interactions for RNA: ENST00000559741.5

PSME1-206, Transcript of proteasome activator subunit 1, humanhuman

TSL 3

Gene PSME1, Length 763 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-206ENST00000559741 NISCHQ9Y2I1 1504 aa24.49■■□□□ 1.51
PSME1-206ENST00000559741 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
PSME1-206ENST00000559741 ABCC9O60706 1549 aa21.32■■□□□ 1
PSME1-206ENST00000559741 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
PSME1-206ENST00000559741 NACADO15069 1562 aa20.52■□□□□ 0.88
PSME1-206ENST00000559741 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
PSME1-206ENST00000559741 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
PSME1-206ENST00000559741 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.85
PSME1-206ENST00000559741 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
PSME1-206ENST00000559741 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
PSME1-206ENST00000559741 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
PSME1-206ENST00000559741 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.774e-6■□□□□ 11
PSME1-206ENST00000559741 SCRIBQ14160 1630 aa19.83■□□□□ 0.76
PSME1-206ENST00000559741 SHROOM4Q9ULL8 1493 aa19.77■□□□□ 0.76
PSME1-206ENST00000559741 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
PSME1-206ENST00000559741 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
PSME1-206ENST00000559741 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
PSME1-206ENST00000559741 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
PSME1-206ENST00000559741 SMARCA4P51532 1647 aa19■□□□□ 0.63
PSME1-206ENST00000559741 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
PSME1-206ENST00000559741 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
PSME1-206ENST00000559741 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
PSME1-206ENST00000559741 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
PSME1-206ENST00000559741 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
PSME1-206ENST00000559741 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
PSME1-206ENST00000559741 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
PSME1-206ENST00000559741 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
PSME1-206ENST00000559741 WIZO95785 1651 aa18.63■□□□□ 0.57
PSME1-206ENST00000559741 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
PSME1-206ENST00000559741 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
PSME1-206ENST00000559741 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
PSME1-206ENST00000559741 NESP48681 1621 aa18.43■□□□□ 0.54
PSME1-206ENST00000559741 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
PSME1-206ENST00000559741 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
PSME1-206ENST00000559741 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
PSME1-206ENST00000559741 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
PSME1-206ENST00000559741 CUX2O14529 1486 aa18.26■□□□□ 0.51
PSME1-206ENST00000559741 CFTRP13569 1480 aa18.25■□□□□ 0.51
PSME1-206ENST00000559741 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
PSME1-206ENST00000559741 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
PSME1-206ENST00000559741 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
PSME1-206ENST00000559741 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
PSME1-206ENST00000559741 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
PSME1-206ENST00000559741 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
PSME1-206ENST00000559741 PRDM2Q13029 1718 aa18.12■□□□□ 0.49
PSME1-206ENST00000559741 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
PSME1-206ENST00000559741 WDR62O43379 1518 aa18.07■□□□□ 0.48
PSME1-206ENST00000559741 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
PSME1-206ENST00000559741 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
PSME1-206ENST00000559741 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
PSME1-206ENST00000559741 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
PSME1-206ENST00000559741 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.45
PSME1-206ENST00000559741 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
PSME1-206ENST00000559741 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
PSME1-206ENST00000559741 CUX1P39880 1505 aa17.68■□□□□ 0.42
PSME1-206ENST00000559741 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
PSME1-206ENST00000559741 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
PSME1-206ENST00000559741 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
PSME1-206ENST00000559741 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
PSME1-206ENST00000559741 SOGA1O94964 1423 aa17.62■□□□□ 0.41
PSME1-206ENST00000559741 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
PSME1-206ENST00000559741 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
PSME1-206ENST00000559741 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.41
PSME1-206ENST00000559741 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
PSME1-206ENST00000559741 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
PSME1-206ENST00000559741 AQRO60306 1485 aaKnown RBP eCLIP17.55■□□□□ 0.41e-7■■■□□ 16.3
PSME1-206ENST00000559741 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
PSME1-206ENST00000559741 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
PSME1-206ENST00000559741 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
PSME1-206ENST00000559741 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
PSME1-206ENST00000559741 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
PSME1-206ENST00000559741 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
PSME1-206ENST00000559741 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
PSME1-206ENST00000559741 ABCA5Q8WWZ7 1642 aa17.41■□□□□ 0.38
PSME1-206ENST00000559741 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
PSME1-206ENST00000559741 MAGI1Q96QZ7 1491 aaPredicted RBP17.4■□□□□ 0.38
PSME1-206ENST00000559741 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
PSME1-206ENST00000559741 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
PSME1-206ENST00000559741 CHD1O14646 1710 aa17.38■□□□□ 0.37
PSME1-206ENST00000559741 SYNJ2O15056 1496 aa17.32■□□□□ 0.36
PSME1-206ENST00000559741 FBLN2P98095 1184 aa17.31■□□□□ 0.36
PSME1-206ENST00000559741 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
PSME1-206ENST00000559741 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
PSME1-206ENST00000559741 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
PSME1-206ENST00000559741 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
PSME1-206ENST00000559741 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
PSME1-206ENST00000559741 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
PSME1-206ENST00000559741 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
PSME1-206ENST00000559741 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
PSME1-206ENST00000559741 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
PSME1-206ENST00000559741 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
PSME1-206ENST00000559741 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
PSME1-206ENST00000559741 IGF1RP08069 1367 aa17.14■□□□□ 0.33
PSME1-206ENST00000559741 NUP160Q12769 1436 aa17.13■□□□□ 0.33
PSME1-206ENST00000559741 CUL7Q14999 1698 aa17.11■□□□□ 0.33
PSME1-206ENST00000559741 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
PSME1-206ENST00000559741 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
PSME1-206ENST00000559741 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
PSME1-206ENST00000559741 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.32
PSME1-206ENST00000559741 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms