RNA–Protein interactions for RNA: ENST00000559312.5

NUMB-231, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-231ENST00000559312 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
NUMB-231ENST00000559312 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
NUMB-231ENST00000559312 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.35
NUMB-231ENST00000559312 NKX1-1Q15270 411 aaPredicted RBP12.85□□□□□ -0.35
NUMB-231ENST00000559312 SOX12O15370 315 aa12.84□□□□□ -0.35
NUMB-231ENST00000559312 CUX1P39880 1505 aa12.84□□□□□ -0.35
NUMB-231ENST00000559312 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
NUMB-231ENST00000559312 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
NUMB-231ENST00000559312 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
NUMB-231ENST00000559312 IER5LQ5T953 404 aa12.79□□□□□ -0.36
NUMB-231ENST00000559312 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
NUMB-231ENST00000559312 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
NUMB-231ENST00000559312 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
NUMB-231ENST00000559312 NLRP6P59044 892 aa12.78□□□□□ -0.36
NUMB-231ENST00000559312 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
NUMB-231ENST00000559312 SLC39A7Q92504 469 aa12.78□□□□□ -0.36
NUMB-231ENST00000559312 MFRPQ9BY79 579 aa12.78□□□□□ -0.36
NUMB-231ENST00000559312 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.37
NUMB-231ENST00000559312 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
NUMB-231ENST00000559312 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
NUMB-231ENST00000559312 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
NUMB-231ENST00000559312 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
NUMB-231ENST00000559312 PLCB2Q00722 1185 aa12.75□□□□□ -0.37
NUMB-231ENST00000559312 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
NUMB-231ENST00000559312 C7P10643 843 aa12.74□□□□□ -0.37
NUMB-231ENST00000559312 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
NUMB-231ENST00000559312 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■□□□□ 10.5
NUMB-231ENST00000559312 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
NUMB-231ENST00000559312 SOGA1O94964 1423 aa12.72□□□□□ -0.37
NUMB-231ENST00000559312 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
NUMB-231ENST00000559312 ILDR1Q86SU0 546 aaPredicted RBP12.71□□□□□ -0.37
NUMB-231ENST00000559312 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
NUMB-231ENST00000559312 OCEL1Q9H607 264 aa12.71□□□□□ -0.38
NUMB-231ENST00000559312 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
NUMB-231ENST00000559312 SEC24BO95487 1268 aa12.69□□□□□ -0.38
NUMB-231ENST00000559312 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
NUMB-231ENST00000559312 RAD54L2Q9Y4B4 1467 aa12.68□□□□□ -0.38
NUMB-231ENST00000559312 PLCG2P16885 1265 aa12.68□□□□□ -0.38
NUMB-231ENST00000559312 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
NUMB-231ENST00000559312 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
NUMB-231ENST00000559312 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
NUMB-231ENST00000559312 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
NUMB-231ENST00000559312 ZNF608Q9ULD9 1512 aaPredicted RBP12.63□□□□□ -0.39
NUMB-231ENST00000559312 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
NUMB-231ENST00000559312 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
NUMB-231ENST00000559312 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
NUMB-231ENST00000559312 PPP1R37O75864 691 aa12.6□□□□□ -0.39
NUMB-231ENST00000559312 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
NUMB-231ENST00000559312 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
NUMB-231ENST00000559312 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■■■□□ 18.1
NUMB-231ENST00000559312 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
NUMB-231ENST00000559312 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
NUMB-231ENST00000559312 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
NUMB-231ENST00000559312 GRIN2BQ13224 1484 aa12.56□□□□□ -0.4
NUMB-231ENST00000559312 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
NUMB-231ENST00000559312 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
NUMB-231ENST00000559312 ERICH3Q5RHP9 1530 aa12.54□□□□□ -0.4
NUMB-231ENST00000559312 G3V3G9 751 aa12.54□□□□□ -0.4
NUMB-231ENST00000559312 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
NUMB-231ENST00000559312 MAGI1Q96QZ7 1491 aaPredicted RBP12.53□□□□□ -0.4
NUMB-231ENST00000559312 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
NUMB-231ENST00000559312 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
NUMB-231ENST00000559312 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
NUMB-231ENST00000559312 EEA1Q15075 1411 aa12.49□□□□□ -0.41
NUMB-231ENST00000559312 TMEM121BQ9BXQ6 578 aaPredicted RBP12.48□□□□□ -0.41
NUMB-231ENST00000559312 IGF1RP08069 1367 aa12.48□□□□□ -0.41
NUMB-231ENST00000559312 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
NUMB-231ENST00000559312 SLC24A1O60721 1099 aa12.46□□□□□ -0.41
NUMB-231ENST00000559312 CUL7Q14999 1698 aa12.46□□□□□ -0.41
NUMB-231ENST00000559312 ADAMTS12P58397 1594 aa12.46□□□□□ -0.42
NUMB-231ENST00000559312 FHAD1B1AJZ9 1412 aa12.46□□□□□ -0.42
NUMB-231ENST00000559312 RUSC2Q8N2Y8 1516 aa12.46□□□□□ -0.42
NUMB-231ENST00000559312 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
NUMB-231ENST00000559312 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
NUMB-231ENST00000559312 CHD1O14646 1710 aa12.41□□□□□ -0.42
NUMB-231ENST00000559312 CARMIL1Q5VZK9 1371 aa12.41□□□□□ -0.42
NUMB-231ENST00000559312 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
NUMB-231ENST00000559312 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
NUMB-231ENST00000559312 GRIN2AQ12879 1464 aa12.4□□□□□ -0.42
NUMB-231ENST00000559312 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
NUMB-231ENST00000559312 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
NUMB-231ENST00000559312 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
NUMB-231ENST00000559312 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
NUMB-231ENST00000559312 MAMSTRQ6ZN01 415 aa12.37□□□□□ -0.43
NUMB-231ENST00000559312 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
NUMB-231ENST00000559312 PDE4AP27815 886 aa12.36□□□□□ -0.43
NUMB-231ENST00000559312 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
NUMB-231ENST00000559312 NUP160Q12769 1436 aa12.34□□□□□ -0.43
NUMB-231ENST00000559312 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
NUMB-231ENST00000559312 LHX8Q68G74 356 aa12.33□□□□□ -0.44
NUMB-231ENST00000559312 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
NUMB-231ENST00000559312 KIF21BO75037 1637 aa12.32□□□□□ -0.44
NUMB-231ENST00000559312 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
NUMB-231ENST00000559312 NCKAP5LQ9HCH0 1330 aa12.32□□□□□ -0.44
NUMB-231ENST00000559312 CEP170Q5SW79 1584 aa12.31□□□□□ -0.44
NUMB-231ENST00000559312 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
NUMB-231ENST00000559312 CLASP1Q7Z460 1538 aa12.3□□□□□ -0.44
NUMB-231ENST00000559312 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
NUMB-231ENST00000559312 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
NUMB-231ENST00000559312 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms