RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 CFTRP13569 1480 aa13.07□□□□□ -0.32
AC090888.3-201ENST00000558917 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
AC090888.3-201ENST00000558917 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
AC090888.3-201ENST00000558917 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
AC090888.3-201ENST00000558917 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
AC090888.3-201ENST00000558917 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
AC090888.3-201ENST00000558917 EIF4G3O43432 1585 aaKnown RBP13.05□□□□□ -0.32
AC090888.3-201ENST00000558917 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
AC090888.3-201ENST00000558917 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
AC090888.3-201ENST00000558917 PSEN1P49768 467 aa13.02□□□□□ -0.33
AC090888.3-201ENST00000558917 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
AC090888.3-201ENST00000558917 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
AC090888.3-201ENST00000558917 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
AC090888.3-201ENST00000558917 ST18O60284 1047 aa12.96□□□□□ -0.33
AC090888.3-201ENST00000558917 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
AC090888.3-201ENST00000558917 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
AC090888.3-201ENST00000558917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
AC090888.3-201ENST00000558917 WIZO95785 1651 aa12.94□□□□□ -0.34
AC090888.3-201ENST00000558917 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
AC090888.3-201ENST00000558917 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
AC090888.3-201ENST00000558917 L3MBTL3Q96JM7 780 aaPredicted RBP12.91□□□□□ -0.34
AC090888.3-201ENST00000558917 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
AC090888.3-201ENST00000558917 SNPHO15079 494 aa12.89□□□□□ -0.35
AC090888.3-201ENST00000558917 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
AC090888.3-201ENST00000558917 CABP2Q9NPB3 220 aa12.88□□□□□ -0.35
AC090888.3-201ENST00000558917 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
AC090888.3-201ENST00000558917 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
AC090888.3-201ENST00000558917 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
AC090888.3-201ENST00000558917 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
AC090888.3-201ENST00000558917 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
AC090888.3-201ENST00000558917 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
AC090888.3-201ENST00000558917 G3V3G9 751 aa12.79□□□□□ -0.36
AC090888.3-201ENST00000558917 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
AC090888.3-201ENST00000558917 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
AC090888.3-201ENST00000558917 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
AC090888.3-201ENST00000558917 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
AC090888.3-201ENST00000558917 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
AC090888.3-201ENST00000558917 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
AC090888.3-201ENST00000558917 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
AC090888.3-201ENST00000558917 POLA1P09884 1462 aaPredicted RBP12.73□□□□□ -0.37
AC090888.3-201ENST00000558917 FBXO41Q8TF61 875 aa12.73□□□□□ -0.37
AC090888.3-201ENST00000558917 BOLA1Q9Y3E2 137 aa12.73□□□□□ -0.37
AC090888.3-201ENST00000558917 EFCAB3Q8N7B9 438 aa12.71□□□□□ -0.37
AC090888.3-201ENST00000558917 CHMP7Q8WUX9 453 aaPredicted RBP12.71□□□□□ -0.37
AC090888.3-201ENST00000558917 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
AC090888.3-201ENST00000558917 EMP3P54852 163 aa12.68□□□□□ -0.38
AC090888.3-201ENST00000558917 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
AC090888.3-201ENST00000558917 LMTK3Q96Q04 1460 aa12.66□□□□□ -0.38
AC090888.3-201ENST00000558917 MAGI1Q96QZ7 1491 aaPredicted RBP12.66□□□□□ -0.38
AC090888.3-201ENST00000558917 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
AC090888.3-201ENST00000558917 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
AC090888.3-201ENST00000558917 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
AC090888.3-201ENST00000558917 ADGRL1O94910 1474 aa12.64□□□□□ -0.39
AC090888.3-201ENST00000558917 KDM6BO15054 1643 aa12.63□□□□□ -0.39
AC090888.3-201ENST00000558917 FAM69CQ0P6D2 419 aa12.63□□□□□ -0.39
AC090888.3-201ENST00000558917 ABCC10Q5T3U5 1492 aa12.62□□□□□ -0.39
AC090888.3-201ENST00000558917 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
AC090888.3-201ENST00000558917 SOGA1O94964 1423 aa12.62□□□□□ -0.39
AC090888.3-201ENST00000558917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.6□□□□□ -0.39
AC090888.3-201ENST00000558917 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
AC090888.3-201ENST00000558917 SOCS7O14512 581 aa12.6□□□□□ -0.39
AC090888.3-201ENST00000558917 ZFP91Q96JP5 570 aaPredicted RBP12.6□□□□□ -0.39
AC090888.3-201ENST00000558917 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
AC090888.3-201ENST00000558917 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
AC090888.3-201ENST00000558917 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
AC090888.3-201ENST00000558917 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
AC090888.3-201ENST00000558917 DIP2BQ9P265 1576 aa12.58□□□□□ -0.4
AC090888.3-201ENST00000558917 SPNS2Q8IVW8 549 aa12.57□□□□□ -0.4
AC090888.3-201ENST00000558917 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
AC090888.3-201ENST00000558917 SOX12O15370 315 aa12.56□□□□□ -0.4
AC090888.3-201ENST00000558917 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
AC090888.3-201ENST00000558917 ZNF710Q8N1W2 664 aa12.56□□□□□ -0.4
AC090888.3-201ENST00000558917 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
AC090888.3-201ENST00000558917 POTEB3A0JP26 581 aa12.54□□□□□ -0.4
AC090888.3-201ENST00000558917 MMRN1Q13201 1228 aa12.54□□□□□ -0.4
AC090888.3-201ENST00000558917 POTEBQ6S5H4 581 aa12.54□□□□□ -0.4
AC090888.3-201ENST00000558917 MICALL2Q8IY33 904 aa12.53□□□□□ -0.4
AC090888.3-201ENST00000558917 PHF8Q9UPP1 1060 aa12.53□□□□□ -0.4
AC090888.3-201ENST00000558917 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
AC090888.3-201ENST00000558917 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
AC090888.3-201ENST00000558917 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
AC090888.3-201ENST00000558917 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
AC090888.3-201ENST00000558917 MAPKBP1O60336 1514 aa12.49□□□□□ -0.41
AC090888.3-201ENST00000558917 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
AC090888.3-201ENST00000558917 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
AC090888.3-201ENST00000558917 NUP160Q12769 1436 aa12.48□□□□□ -0.41
AC090888.3-201ENST00000558917 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
AC090888.3-201ENST00000558917 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
AC090888.3-201ENST00000558917 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
AC090888.3-201ENST00000558917 TMEM92Q6UXU6 159 aa12.46□□□□□ -0.41
AC090888.3-201ENST00000558917 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
AC090888.3-201ENST00000558917 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.41
AC090888.3-201ENST00000558917 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
AC090888.3-201ENST00000558917 GRIN2AQ12879 1464 aa12.46□□□□□ -0.42
AC090888.3-201ENST00000558917 COL17A1Q9UMD9 1497 aaPredicted RBP12.45□□□□□ -0.42
AC090888.3-201ENST00000558917 ERBB3P21860 1342 aa12.44□□□□□ -0.42
AC090888.3-201ENST00000558917 STK24Q9Y6E0 443 aa12.44□□□□□ -0.42
AC090888.3-201ENST00000558917 NLRP6P59044 892 aa12.42□□□□□ -0.42
AC090888.3-201ENST00000558917 CUX1P39880 1505 aa12.42□□□□□ -0.42
AC090888.3-201ENST00000558917 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms