RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 CYB5RLQ6IPT4 315 aa14.82□□□□□ -0.04
SCG3-203ENST00000558709 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
SCG3-203ENST00000558709 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
SCG3-203ENST00000558709 TARBP1Q13395 1621 aaKnown RBP14.8□□□□□ -0.04
SCG3-203ENST00000558709 IRX5P78411 483 aaPredicted RBP14.79□□□□□ -0.04
SCG3-203ENST00000558709 TAOK2Q9UL54 1235 aa14.79□□□□□ -0.04
SCG3-203ENST00000558709 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
SCG3-203ENST00000558709 COLQQ9Y215 455 aaPredicted RBP14.78□□□□□ -0.04
SCG3-203ENST00000558709 POTEB2H3BUK9 544 aa14.77□□□□□ -0.05
SCG3-203ENST00000558709 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
SCG3-203ENST00000558709 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
SCG3-203ENST00000558709 LHX8Q68G74 356 aa14.74□□□□□ -0.05
SCG3-203ENST00000558709 BCL11BQ9C0K0 894 aaPredicted RBP14.73□□□□□ -0.05
SCG3-203ENST00000558709 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
SCG3-203ENST00000558709 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
SCG3-203ENST00000558709 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.05
SCG3-203ENST00000558709 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
SCG3-203ENST00000558709 MKRN3Q13064 507 aaKnown RBP14.7□□□□□ -0.06
SCG3-203ENST00000558709 STK25O00506 426 aa14.69□□□□□ -0.06
SCG3-203ENST00000558709 POTEJP0CG39 1038 aa14.69□□□□□ -0.06
SCG3-203ENST00000558709 EFCAB3Q8N7B9 438 aa14.69□□□□□ -0.06
SCG3-203ENST00000558709 PDCD7Q8N8D1 485 aaKnown RBP14.69□□□□□ -0.06
SCG3-203ENST00000558709 OCEL1Q9H607 264 aa14.68□□□□□ -0.06
SCG3-203ENST00000558709 CLASP1Q7Z460 1538 aa14.67□□□□□ -0.06
SCG3-203ENST00000558709 SEC24BO95487 1268 aa14.67□□□□□ -0.06
SCG3-203ENST00000558709 HS6ST3Q8IZP7 471 aa14.67□□□□□ -0.06
SCG3-203ENST00000558709 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
SCG3-203ENST00000558709 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
SCG3-203ENST00000558709 PLCG2P16885 1265 aa14.65□□□□□ -0.06
SCG3-203ENST00000558709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCG3-203ENST00000558709 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
SCG3-203ENST00000558709 SOX12O15370 315 aa14.61□□□□□ -0.07
SCG3-203ENST00000558709 WDR97A6NE52 1622 aa14.6□□□□□ -0.07
SCG3-203ENST00000558709 SNAPC4Q5SXM2 1469 aa14.6□□□□□ -0.07
SCG3-203ENST00000558709 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
SCG3-203ENST00000558709 PBRM1Q86U86 1689 aa14.58□□□□□ -0.07
SCG3-203ENST00000558709 CHGAP10645 457 aaKnown RBP14.57□□□□□ -0.08
SCG3-203ENST00000558709 FBXO22Q8NEZ5 403 aa14.56□□□□□ -0.08
SCG3-203ENST00000558709 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
SCG3-203ENST00000558709 MS4A4AQ96JQ5 239 aa14.56□□□□□ -0.08
SCG3-203ENST00000558709 PHF8Q9UPP1 1060 aa14.56□□□□□ -0.08
SCG3-203ENST00000558709 MFRPQ9BY79 579 aa14.55□□□□□ -0.08
SCG3-203ENST00000558709 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
SCG3-203ENST00000558709 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
SCG3-203ENST00000558709 DPY19L2Q6NUT2 758 aa14.53□□□□□ -0.08
SCG3-203ENST00000558709 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
SCG3-203ENST00000558709 SOGA1O94964 1423 aa14.51□□□□□ -0.09
SCG3-203ENST00000558709 NLRP6P59044 892 aa14.49□□□□□ -0.09
SCG3-203ENST00000558709 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
SCG3-203ENST00000558709 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
SCG3-203ENST00000558709 SYNJ2O15056 1496 aa14.49□□□□□ -0.09
SCG3-203ENST00000558709 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
SCG3-203ENST00000558709 MAMSTRQ6ZN01 415 aa14.48□□□□□ -0.09
SCG3-203ENST00000558709 GRIN2BQ13224 1484 aa14.47□□□□□ -0.09
SCG3-203ENST00000558709 CHMP7Q8WUX9 453 aaPredicted RBP14.46□□□□□ -0.09
SCG3-203ENST00000558709 L3MBTL3Q96JM7 780 aaPredicted RBP14.45□□□□□ -0.1
SCG3-203ENST00000558709 CUX1P39880 1505 aa14.45□□□□□ -0.1
SCG3-203ENST00000558709 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
SCG3-203ENST00000558709 TMEM121BQ9BXQ6 578 aaPredicted RBP14.43□□□□□ -0.1
SCG3-203ENST00000558709 SCUBE2Q9NQ36 999 aa14.42□□□□□ -0.1
SCG3-203ENST00000558709 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
SCG3-203ENST00000558709 BOLA1Q9Y3E2 137 aa14.4□□□□□ -0.1
SCG3-203ENST00000558709 MICALL2Q8IY33 904 aa14.36□□□□□ -0.11
SCG3-203ENST00000558709 CEP170Q5SW79 1584 aa14.35□□□□□ -0.11
SCG3-203ENST00000558709 SHROOM2Q13796 1616 aa14.35□□□□□ -0.11
SCG3-203ENST00000558709 PPP1R37O75864 691 aa14.33□□□□□ -0.12
SCG3-203ENST00000558709 ADAMTS12P58397 1594 aa14.32□□□□□ -0.12
SCG3-203ENST00000558709 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
SCG3-203ENST00000558709 GTPBP6O43824 516 aaPredicted RBP14.31□□□□□ -0.12
SCG3-203ENST00000558709 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.31□□□□□ -0.12
SCG3-203ENST00000558709 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
SCG3-203ENST00000558709 C3orf67Q6ZVT6 689 aa14.29□□□□□ -0.12
SCG3-203ENST00000558709 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
SCG3-203ENST00000558709 G3V3G9 751 aa14.27□□□□□ -0.13
SCG3-203ENST00000558709 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
SCG3-203ENST00000558709 RYDENQ9NUL5 291 aaKnown RBP14.26□□□□□ -0.13
SCG3-203ENST00000558709 NUP160Q12769 1436 aa14.25□□□□□ -0.13
SCG3-203ENST00000558709 TSPOAP1O95153 1857 aa14.25□□□□□ -0.13
SCG3-203ENST00000558709 TMEM92Q6UXU6 159 aa14.24□□□□□ -0.13
SCG3-203ENST00000558709 DIP2BQ9P265 1576 aa14.2□□□□□ -0.14
SCG3-203ENST00000558709 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
SCG3-203ENST00000558709 KDM6BO15054 1643 aa14.18□□□□□ -0.14
SCG3-203ENST00000558709 ABCC10Q5T3U5 1492 aa14.15□□□□□ -0.14
SCG3-203ENST00000558709 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
SCG3-203ENST00000558709 MAPKBP1O60336 1514 aa14.15□□□□□ -0.14
SCG3-203ENST00000558709 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
SCG3-203ENST00000558709 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
SCG3-203ENST00000558709 KIF3CO14782 793 aa14.14□□□□□ -0.15
SCG3-203ENST00000558709 TOP2BQ02880 1626 aa14.14□□□□□ -0.15
SCG3-203ENST00000558709 PRG4Q92954 1404 aaPredicted RBP14.14□□□□□ -0.15
SCG3-203ENST00000558709 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
SCG3-203ENST00000558709 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
SCG3-203ENST00000558709 LCE2DQ5TA82 110 aaPredicted RBP14.11□□□□□ -0.15
SCG3-203ENST00000558709 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
SCG3-203ENST00000558709 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
SCG3-203ENST00000558709 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
SCG3-203ENST00000558709 C2orf72A6NCS6 295 aa14.06□□□□□ -0.16
SCG3-203ENST00000558709 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
SCG3-203ENST00000558709 HOXB3P14651 431 aaPredicted RBP14.05□□□□□ -0.16
SCG3-203ENST00000558709 PPRC1Q5VV67 1664 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms