RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 RAPGEF3O95398 923 aa25.01■■□□□ 1.59
RABGGTA-206ENST00000558649 SUPT6HQ7KZ85 1726 aaKnown RBP25■■□□□ 1.59
RABGGTA-206ENST00000558649 EFCAB2Q5VUJ9 269 aa25■■□□□ 1.59
RABGGTA-206ENST00000558649 RICTORQ6R327 1708 aa25■■□□□ 1.59
RABGGTA-206ENST00000558649 DENND4BO75064 1496 aaPredicted RBP24.98■■□□□ 1.59
RABGGTA-206ENST00000558649 LRRC9Q6ZRR7 1453 aa24.97■■□□□ 1.59
RABGGTA-206ENST00000558649 CCNB3Q8WWL7 1395 aa24.97■■□□□ 1.59
RABGGTA-206ENST00000558649 MAP3K1Q13233 1512 aa24.96■■□□□ 1.59
RABGGTA-206ENST00000558649 APLP2Q06481 763 aa24.96■■□□□ 1.59
RABGGTA-206ENST00000558649 SCAPERQ9BY12 1400 aa24.95■■□□□ 1.59
RABGGTA-206ENST00000558649 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
RABGGTA-206ENST00000558649 GPATCH8Q9UKJ3 1502 aaKnown RBP24.95■■□□□ 1.58
RABGGTA-206ENST00000558649 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
RABGGTA-206ENST00000558649 ZNF777Q9ULD5 760 aaPredicted RBP24.92■■□□□ 1.58
RABGGTA-206ENST00000558649 KANK4Q5T7N3 995 aaPredicted RBP24.91■■□□□ 1.58
RABGGTA-206ENST00000558649 POGZQ7Z3K3 1410 aa24.91■■□□□ 1.58
RABGGTA-206ENST00000558649 ABCC1P33527 1531 aa24.91■■□□□ 1.58
RABGGTA-206ENST00000558649 SAMD9LQ8IVG5 1584 aa24.9■■□□□ 1.58
RABGGTA-206ENST00000558649 CFDP1Q9UEE9 299 aaPredicted RBP24.87■■□□□ 1.57
RABGGTA-206ENST00000558649 ZMYM4Q5VZL5 1548 aa24.86■■□□□ 1.57
RABGGTA-206ENST00000558649 SYCP2Q9BX26 1530 aa24.85■■□□□ 1.57
RABGGTA-206ENST00000558649 ARHGEF40Q8TER5 1519 aa24.84■■□□□ 1.57
RABGGTA-206ENST00000558649 ARHGEF12Q9NZN5 1544 aa24.84■■□□□ 1.57
RABGGTA-206ENST00000558649 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.57
RABGGTA-206ENST00000558649 ZFYVE16Q7Z3T8 1539 aa24.82■■□□□ 1.56
RABGGTA-206ENST00000558649 KDM5CP41229 1560 aa24.8■■□□□ 1.56
RABGGTA-206ENST00000558649 TRAPPC8Q9Y2L5 1435 aa24.79■■□□□ 1.56
RABGGTA-206ENST00000558649 AFAP1Q8N556 730 aa24.79■■□□□ 1.56
RABGGTA-206ENST00000558649 YEATS2Q9ULM3 1422 aa24.78■■□□□ 1.56
RABGGTA-206ENST00000558649 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
RABGGTA-206ENST00000558649 HECW2Q9P2P5 1572 aa24.78■■□□□ 1.56
RABGGTA-206ENST00000558649 PLEKHH2Q8IVE3 1493 aa24.77■■□□□ 1.56
RABGGTA-206ENST00000558649 ZNF644Q9H582 1327 aaPredicted RBP24.77■■□□□ 1.56
RABGGTA-206ENST00000558649 HNRNPMP52272 730 aaKnown RBP eCLIP24.76■■□□□ 1.55
RABGGTA-206ENST00000558649 MAGI2Q86UL8 1455 aa24.76■■□□□ 1.55
RABGGTA-206ENST00000558649 CAMSAP2Q08AD1 1489 aa24.75■■□□□ 1.55
RABGGTA-206ENST00000558649 MYOM3Q5VTT5 1437 aa24.72■■□□□ 1.55
RABGGTA-206ENST00000558649 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
RABGGTA-206ENST00000558649 ABCA6Q8N139 1617 aa24.7■■□□□ 1.54
RABGGTA-206ENST00000558649 SIGLEC1Q9BZZ2 1709 aa24.69■■□□□ 1.54
RABGGTA-206ENST00000558649 ARID4BQ4LE39 1312 aaPredicted RBP24.69■■□□□ 1.54
RABGGTA-206ENST00000558649 DIP2CQ9Y2E4 1556 aa24.68■■□□□ 1.54
RABGGTA-206ENST00000558649 KIDINS220Q9ULH0 1771 aa24.68■■□□□ 1.54
RABGGTA-206ENST00000558649 KDM4FA0A1W2PPD8 638 aa24.68■■□□□ 1.54
RABGGTA-206ENST00000558649 MLH3Q9UHC1 1453 aa24.67■■□□□ 1.54
RABGGTA-206ENST00000558649 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
RABGGTA-206ENST00000558649 ATP10AO60312 1499 aa24.65■■□□□ 1.54
RABGGTA-206ENST00000558649 MBD5Q9P267 1494 aa24.64■■□□□ 1.54
RABGGTA-206ENST00000558649 SPAG9O60271 1321 aaKnown RBP24.64■■□□□ 1.54
RABGGTA-206ENST00000558649 INO80Q9ULG1 1556 aaPredicted RBP24.64■■□□□ 1.54
RABGGTA-206ENST00000558649 C9orf84Q5VXU9 1444 aa24.64■■□□□ 1.54
RABGGTA-206ENST00000558649 PPARGC1BQ86YN6 1023 aaKnown RBP24.64■■□□□ 1.54
RABGGTA-206ENST00000558649 ATP7AQ04656 1500 aa24.64■■□□□ 1.53
RABGGTA-206ENST00000558649 MIA2Q96PC5 1412 aa24.63■■□□□ 1.53
RABGGTA-206ENST00000558649 BCORL1Q5H9F3 1711 aa24.63■■□□□ 1.53
RABGGTA-206ENST00000558649 PTPN23Q9H3S7 1636 aa24.62■■□□□ 1.53
RABGGTA-206ENST00000558649 CCDC141Q6ZP82 1450 aa24.62■■□□□ 1.53
RABGGTA-206ENST00000558649 ARHGEF5Q12774 1597 aa24.6■■□□□ 1.53
RABGGTA-206ENST00000558649 FGD6Q6ZV73 1430 aa24.59■■□□□ 1.53
RABGGTA-206ENST00000558649 ADAMTSL3P82987 1691 aa24.56■■□□□ 1.52
RABGGTA-206ENST00000558649 REREQ9P2R6 1566 aa24.55■■□□□ 1.52
RABGGTA-206ENST00000558649 MADDQ8WXG6 1647 aa24.55■■□□□ 1.52
RABGGTA-206ENST00000558649 MLECQ14165 292 aa24.55■■□□□ 1.52
RABGGTA-206ENST00000558649 ADGBQ8N7X0 1667 aa24.53■■□□□ 1.52
RABGGTA-206ENST00000558649 CROCC2H7BZ55 1655 aa24.51■■□□□ 1.51
RABGGTA-206ENST00000558649 RIMS1Q86UR5 1692 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-206ENST00000558649 TCOF1Q13428 1488 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-206ENST00000558649 FER1L4A9Z1Z3 1794 aa24.5■■□□□ 1.51
RABGGTA-206ENST00000558649 RSPH4AQ5TD94 716 aa24.5■■□□□ 1.51
RABGGTA-206ENST00000558649 RTEL1-TNFRSF6BF6WH68 1400 aa24.49■■□□□ 1.51
RABGGTA-206ENST00000558649 TSPY4P0CV99 314 aa24.48■■□□□ 1.51
RABGGTA-206ENST00000558649 TSPY10P0CW01 314 aa24.48■■□□□ 1.51
RABGGTA-206ENST00000558649 DNMT1P26358 1616 aaKnown RBP24.47■■□□□ 1.51
RABGGTA-206ENST00000558649 A2MP01023 1474 aa24.47■■□□□ 1.51
RABGGTA-206ENST00000558649 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
RABGGTA-206ENST00000558649 MAST1Q9Y2H9 1570 aa24.46■■□□□ 1.51
RABGGTA-206ENST00000558649 FAM50AQ14320 339 aaKnown RBP24.46■■□□□ 1.51
RABGGTA-206ENST00000558649 AGLP35573 1532 aa24.45■■□□□ 1.51
RABGGTA-206ENST00000558649 DAPK1P53355 1430 aa24.44■■□□□ 1.5
RABGGTA-206ENST00000558649 ABCC5O15440 1437 aa24.42■■□□□ 1.5
RABGGTA-206ENST00000558649 PTPRMP28827 1452 aa24.41■■□□□ 1.5
RABGGTA-206ENST00000558649 SHANK2Q9UPX8 1470 aa24.4■■□□□ 1.5
RABGGTA-206ENST00000558649 PLPPR3Q6T4P5 718 aa24.39■■□□□ 1.49
RABGGTA-206ENST00000558649 DHX29Q7Z478 1369 aaKnown RBP24.36■■□□□ 1.49
RABGGTA-206ENST00000558649 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
RABGGTA-206ENST00000558649 ESF1Q9H501 851 aaKnown RBP24.33■■□□□ 1.49
RABGGTA-206ENST00000558649 GGT6Q6P531 493 aa24.31■■□□□ 1.48
RABGGTA-206ENST00000558649 CLTCQ00610 1675 aaKnown RBP24.3■■□□□ 1.48
RABGGTA-206ENST00000558649 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
RABGGTA-206ENST00000558649 KIF15Q9NS87 1388 aa24.29■■□□□ 1.48
RABGGTA-206ENST00000558649 KIF3BO15066 747 aa24.29■■□□□ 1.48
RABGGTA-206ENST00000558649 RRP7BPQ9NSQ0 103 aa24.29■■□□□ 1.48
RABGGTA-206ENST00000558649 EIF2AK4Q9P2K8 1649 aaKnown RBP24.28■■□□□ 1.48
RABGGTA-206ENST00000558649 ITGAEP38570 1179 aa24.27■■□□□ 1.48
RABGGTA-206ENST00000558649 C3P01024 1663 aa24.27■■□□□ 1.48
RABGGTA-206ENST00000558649 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
RABGGTA-206ENST00000558649 MROH2AA6NES4 1674 aa24.24■■□□□ 1.47
RABGGTA-206ENST00000558649 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
RABGGTA-206ENST00000558649 RRBP1Q9P2E9 1410 aaKnown RBP24.24■■□□□ 1.47
RABGGTA-206ENST00000558649 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms