RNA–Protein interactions for RNA: ENST00000558601.1

AC013356.3-201, humanhuman

TSL 3 BASIC

Gene AC013356.3, Length 584 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013356.3-201ENST00000558601 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
AC013356.3-201ENST00000558601 DENND4BO75064 1496 aaPredicted RBP12.2□□□□□ -0.46
AC013356.3-201ENST00000558601 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
AC013356.3-201ENST00000558601 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
AC013356.3-201ENST00000558601 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
AC013356.3-201ENST00000558601 LTBP4Q8N2S1 1624 aa12.15□□□□□ -0.46
AC013356.3-201ENST00000558601 MAGI2Q86UL8 1455 aa12.15□□□□□ -0.46
AC013356.3-201ENST00000558601 PTPRTO14522 1441 aa12.15□□□□□ -0.46
AC013356.3-201ENST00000558601 SETD1BQ9UPS6 1966 aaKnown RBP12.15□□□□□ -0.46
AC013356.3-201ENST00000558601 ARHGEF12Q9NZN5 1544 aa12.15□□□□□ -0.46
AC013356.3-201ENST00000558601 UHRF1BP1Q6BDS2 1440 aa12.14□□□□□ -0.47
AC013356.3-201ENST00000558601 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
AC013356.3-201ENST00000558601 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
AC013356.3-201ENST00000558601 MLECQ14165 292 aa12.11□□□□□ -0.47
AC013356.3-201ENST00000558601 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
AC013356.3-201ENST00000558601 HECW1Q76N89 1606 aa12.1□□□□□ -0.47
AC013356.3-201ENST00000558601 FMN1Q68DA7 1419 aa12.09□□□□□ -0.47
AC013356.3-201ENST00000558601 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
AC013356.3-201ENST00000558601 CHIC1Q5VXU3 224 aa12.07□□□□□ -0.48
AC013356.3-201ENST00000558601 C9orf84Q5VXU9 1444 aa12.07□□□□□ -0.48
AC013356.3-201ENST00000558601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
AC013356.3-201ENST00000558601 MED1Q15648 1581 aaPredicted RBP12.06□□□□□ -0.48
AC013356.3-201ENST00000558601 ATP10AO60312 1499 aa12.05□□□□□ -0.48
AC013356.3-201ENST00000558601 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
AC013356.3-201ENST00000558601 PLCH2O75038 1416 aa12.04□□□□□ -0.48
AC013356.3-201ENST00000558601 SCAPERQ9BY12 1400 aa12.04□□□□□ -0.48
AC013356.3-201ENST00000558601 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
AC013356.3-201ENST00000558601 C3P01024 1663 aa12.03□□□□□ -0.48
AC013356.3-201ENST00000558601 NCOA1Q15788 1441 aa12.03□□□□□ -0.48
AC013356.3-201ENST00000558601 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
AC013356.3-201ENST00000558601 UBAP1LF5GYI3 381 aa12.01□□□□□ -0.49
AC013356.3-201ENST00000558601 CLIP1P30622 1438 aa12.01□□□□□ -0.49
AC013356.3-201ENST00000558601 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
AC013356.3-201ENST00000558601 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
AC013356.3-201ENST00000558601 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
AC013356.3-201ENST00000558601 REREQ9P2R6 1566 aa11.97□□□□□ -0.49
AC013356.3-201ENST00000558601 TRAPPC8Q9Y2L5 1435 aa11.97□□□□□ -0.49
AC013356.3-201ENST00000558601 AFAP1Q8N556 730 aa11.96□□□□□ -0.49
AC013356.3-201ENST00000558601 ARHGAP5Q13017 1502 aa11.96□□□□□ -0.5
AC013356.3-201ENST00000558601 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
AC013356.3-201ENST00000558601 KIF14Q15058 1648 aa11.95□□□□□ -0.5
AC013356.3-201ENST00000558601 KDM5CP41229 1560 aa11.95□□□□□ -0.5
AC013356.3-201ENST00000558601 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
AC013356.3-201ENST00000558601 DIP2CQ9Y2E4 1556 aa11.94□□□□□ -0.5
AC013356.3-201ENST00000558601 PHF23Q9BUL5 403 aaPredicted RBP11.94□□□□□ -0.5
AC013356.3-201ENST00000558601 AGLP35573 1532 aa11.94□□□□□ -0.5
AC013356.3-201ENST00000558601 ZNF335Q9H4Z2 1342 aaPredicted RBP11.93□□□□□ -0.5
AC013356.3-201ENST00000558601 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
AC013356.3-201ENST00000558601 SUPT6HQ7KZ85 1726 aaKnown RBP11.92□□□□□ -0.5
AC013356.3-201ENST00000558601 CCDC18Q5T9S5 1454 aa11.92□□□□□ -0.5
AC013356.3-201ENST00000558601 ESF1Q9H501 851 aaKnown RBP11.92□□□□□ -0.5
AC013356.3-201ENST00000558601 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
AC013356.3-201ENST00000558601 ZNF142P52746 1687 aaPredicted RBP11.91□□□□□ -0.5
AC013356.3-201ENST00000558601 HSPA1LP34931 641 aa11.91□□□□□ -0.5
AC013356.3-201ENST00000558601 NPATQ14207 1427 aa11.91□□□□□ -0.5
AC013356.3-201ENST00000558601 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
AC013356.3-201ENST00000558601 PLA2R1Q13018 1463 aa11.9□□□□□ -0.5
AC013356.3-201ENST00000558601 ABCA6Q8N139 1617 aa11.9□□□□□ -0.5
AC013356.3-201ENST00000558601 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
AC013356.3-201ENST00000558601 MYO3AQ8NEV4 1616 aa11.88□□□□□ -0.51
AC013356.3-201ENST00000558601 PKD2Q13563 968 aa11.87□□□□□ -0.51
AC013356.3-201ENST00000558601 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
AC013356.3-201ENST00000558601 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
AC013356.3-201ENST00000558601 MLH3Q9UHC1 1453 aa11.87□□□□□ -0.51
AC013356.3-201ENST00000558601 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
AC013356.3-201ENST00000558601 CPS1P31327 1500 aa11.86□□□□□ -0.51
AC013356.3-201ENST00000558601 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
AC013356.3-201ENST00000558601 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
AC013356.3-201ENST00000558601 TOM1O60784 492 aa11.85□□□□□ -0.51
AC013356.3-201ENST00000558601 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
AC013356.3-201ENST00000558601 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
AC013356.3-201ENST00000558601 ABCC1P33527 1531 aa11.83□□□□□ -0.52
AC013356.3-201ENST00000558601 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
AC013356.3-201ENST00000558601 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
AC013356.3-201ENST00000558601 PPP6R1Q9UPN7 881 aa11.82□□□□□ -0.52
AC013356.3-201ENST00000558601 POLR1AO95602 1720 aaPredicted RBP11.82□□□□□ -0.52
AC013356.3-201ENST00000558601 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
AC013356.3-201ENST00000558601 LRRIQ1Q96JM4 1722 aa11.81□□□□□ -0.52
AC013356.3-201ENST00000558601 CDC42BPBQ9Y5S2 1711 aa11.81□□□□□ -0.52
AC013356.3-201ENST00000558601 HNRNPMP52272 730 aaKnown RBP eCLIP11.81□□□□□ -0.52
AC013356.3-201ENST00000558601 MTUS2Q5JR59 1369 aa11.8□□□□□ -0.52
AC013356.3-201ENST00000558601 PTPRKQ15262 1439 aa11.8□□□□□ -0.52
AC013356.3-201ENST00000558601 PLEKHH2Q8IVE3 1493 aa11.8□□□□□ -0.52
AC013356.3-201ENST00000558601 GPATCH8Q9UKJ3 1502 aaKnown RBP11.8□□□□□ -0.52
AC013356.3-201ENST00000558601 ITSN2Q9NZM3 1697 aa11.79□□□□□ -0.52
AC013356.3-201ENST00000558601 KIDINS220Q9ULH0 1771 aa11.79□□□□□ -0.52
AC013356.3-201ENST00000558601 KIAA1107Q9UPP5 1409 aa11.78□□□□□ -0.52
AC013356.3-201ENST00000558601 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
AC013356.3-201ENST00000558601 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
AC013356.3-201ENST00000558601 SHANK2Q9UPX8 1470 aa11.77□□□□□ -0.52
AC013356.3-201ENST00000558601 ALKQ9UM73 1620 aa11.77□□□□□ -0.53
AC013356.3-201ENST00000558601 SYCP2Q9BX26 1530 aa11.76□□□□□ -0.53
AC013356.3-201ENST00000558601 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
AC013356.3-201ENST00000558601 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
AC013356.3-201ENST00000558601 SRCAPQ6ZRS2 3230 aa11.75□□□□□ -0.53
AC013356.3-201ENST00000558601 NEURL4Q96JN8 1562 aa11.75□□□□□ -0.53
AC013356.3-201ENST00000558601 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
AC013356.3-201ENST00000558601 GGT6Q6P531 493 aa11.74□□□□□ -0.53
AC013356.3-201ENST00000558601 A2ML1A8K2U0 1454 aa11.74□□□□□ -0.53
AC013356.3-201ENST00000558601 RNF17Q9BXT8 1623 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms