RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
ZEB1-210ENST00000557827 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
ZEB1-210ENST00000557827 ARID3AQ99856 593 aa12.43□□□□□ -0.42
ZEB1-210ENST00000557827 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
ZEB1-210ENST00000557827 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
ZEB1-210ENST00000557827 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
ZEB1-210ENST00000557827 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
ZEB1-210ENST00000557827 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
ZEB1-210ENST00000557827 HAX1O00165 279 aa12.35□□□□□ -0.43
ZEB1-210ENST00000557827 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
ZEB1-210ENST00000557827 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
ZEB1-210ENST00000557827 MAP3K13O43283 966 aa12.33□□□□□ -0.44
ZEB1-210ENST00000557827 NPM2Q86SE8 214 aaKnown RBP12.32□□□□□ -0.44
ZEB1-210ENST00000557827 ARID3CA6NKF2 412 aa12.3□□□□□ -0.44
ZEB1-210ENST00000557827 APBB1O00213 710 aa12.3□□□□□ -0.44
ZEB1-210ENST00000557827 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
ZEB1-210ENST00000557827 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
ZEB1-210ENST00000557827 FLIIQ13045 1269 aa12.26□□□□□ -0.45
ZEB1-210ENST00000557827 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
ZEB1-210ENST00000557827 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
ZEB1-210ENST00000557827 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
ZEB1-210ENST00000557827 GPR37O15354 613 aa12.24□□□□□ -0.45
ZEB1-210ENST00000557827 DPYSL4O14531 572 aa12.23□□□□□ -0.45
ZEB1-210ENST00000557827 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
ZEB1-210ENST00000557827 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
ZEB1-210ENST00000557827 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
ZEB1-210ENST00000557827 PDIA6Q15084 440 aa12.2□□□□□ -0.46
ZEB1-210ENST00000557827 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
ZEB1-210ENST00000557827 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
ZEB1-210ENST00000557827 PDIA4P13667 645 aaKnown RBP12.19□□□□□ -0.46
ZEB1-210ENST00000557827 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
ZEB1-210ENST00000557827 CCDC102AQ96A19 550 aa12.17□□□□□ -0.46
ZEB1-210ENST00000557827 IRF6O14896 467 aa12.16□□□□□ -0.46
ZEB1-210ENST00000557827 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
ZEB1-210ENST00000557827 AMHR2Q16671 573 aa12.16□□□□□ -0.46
ZEB1-210ENST00000557827 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
ZEB1-210ENST00000557827 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
ZEB1-210ENST00000557827 ZBTB7CA1YPR0 619 aa12.14□□□□□ -0.47
ZEB1-210ENST00000557827 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
ZEB1-210ENST00000557827 A6NJR5 290 aa12.13□□□□□ -0.47
ZEB1-210ENST00000557827 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
ZEB1-210ENST00000557827 TRAK2O60296 914 aa12.11□□□□□ -0.47
ZEB1-210ENST00000557827 DSG2Q14126 1118 aa12.1□□□□□ -0.47
ZEB1-210ENST00000557827 CCDC82Q8N4S0 544 aa12.1□□□□□ -0.47
ZEB1-210ENST00000557827 CLUAP1Q96AJ1 413 aa12.1□□□□□ -0.47
ZEB1-210ENST00000557827 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
ZEB1-210ENST00000557827 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
ZEB1-210ENST00000557827 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
ZEB1-210ENST00000557827 GRXCR2A6NFK2 248 aa12.07□□□□□ -0.48
ZEB1-210ENST00000557827 NECTIN2Q92692 538 aa12.07□□□□□ -0.48
ZEB1-210ENST00000557827 GNPATO15228 680 aa12.06□□□□□ -0.48
ZEB1-210ENST00000557827 EVX2Q03828 476 aa12.06□□□□□ -0.48
ZEB1-210ENST00000557827 PCMTD1Q96MG8 357 aaPredicted RBP12.04□□□□□ -0.48
ZEB1-210ENST00000557827 FECHP22830 423 aa12.03□□□□□ -0.48
ZEB1-210ENST00000557827 CLCN6P51797 869 aa12.03□□□□□ -0.48
ZEB1-210ENST00000557827 TTLL12Q14166 644 aaPredicted RBP12.03□□□□□ -0.48
ZEB1-210ENST00000557827 FOXK1P85037 733 aa12.02□□□□□ -0.49
ZEB1-210ENST00000557827 HIC1Q14526 733 aa12.01□□□□□ -0.49
ZEB1-210ENST00000557827 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
ZEB1-210ENST00000557827 OSBPP22059 807 aa12□□□□□ -0.49
ZEB1-210ENST00000557827 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
ZEB1-210ENST00000557827 FCHSD2O94868 740 aa11.99□□□□□ -0.49
ZEB1-210ENST00000557827 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
ZEB1-210ENST00000557827 MS4A1P11836 297 aa11.98□□□□□ -0.49
ZEB1-210ENST00000557827 TMC2Q8TDI7 906 aa11.98□□□□□ -0.49
ZEB1-210ENST00000557827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.491e-7■■■■■ 28.4
ZEB1-210ENST00000557827 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
ZEB1-210ENST00000557827 MCM6Q14566 821 aa11.97□□□□□ -0.49
ZEB1-210ENST00000557827 GIGYF2Q6Y7W6 1299 aaKnown RBP11.97□□□□□ -0.49
ZEB1-210ENST00000557827 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
ZEB1-210ENST00000557827 PLPP6Q8IY26 295 aa11.96□□□□□ -0.49
ZEB1-210ENST00000557827 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
ZEB1-210ENST00000557827 SH3D19Q5HYK7 790 aa11.92□□□□□ -0.5
ZEB1-210ENST00000557827 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
ZEB1-210ENST00000557827 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
ZEB1-210ENST00000557827 TRAIPQ9BWF2 469 aa11.92□□□□□ -0.5
ZEB1-210ENST00000557827 GABBR2O75899 941 aa11.91□□□□□ -0.5
ZEB1-210ENST00000557827 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
ZEB1-210ENST00000557827 PTGER2P43116 358 aa11.9□□□□□ -0.5
ZEB1-210ENST00000557827 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
ZEB1-210ENST00000557827 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
ZEB1-210ENST00000557827 SERPINA10Q9UK55 444 aa11.89□□□□□ -0.51
ZEB1-210ENST00000557827 PTGDRQ13258 359 aa11.87□□□□□ -0.51
ZEB1-210ENST00000557827 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
ZEB1-210ENST00000557827 DDX12PQ92771 950 aa11.87□□□□□ -0.51
ZEB1-210ENST00000557827 CCDC97Q96F63 343 aaPredicted RBP11.87□□□□□ -0.51
ZEB1-210ENST00000557827 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
ZEB1-210ENST00000557827 SKIV2LQ15477 1246 aaKnown RBP11.86□□□□□ -0.51
ZEB1-210ENST00000557827 KCTD17Q8N5Z5 321 aa11.86□□□□□ -0.51
ZEB1-210ENST00000557827 POM121Q96HA1 1249 aa11.86□□□□□ -0.51
ZEB1-210ENST00000557827 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
ZEB1-210ENST00000557827 RAD21O60216 631 aa11.85□□□□□ -0.51
ZEB1-210ENST00000557827 TIE1P35590 1138 aa11.85□□□□□ -0.51
ZEB1-210ENST00000557827 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
ZEB1-210ENST00000557827 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
ZEB1-210ENST00000557827 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
ZEB1-210ENST00000557827 KIF3CO14782 793 aa11.83□□□□□ -0.52
ZEB1-210ENST00000557827 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
ZEB1-210ENST00000557827 CLCN1P35523 988 aa11.81□□□□□ -0.52
ZEB1-210ENST00000557827 PROCA1Q8NCQ7 364 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms