RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 FBLN2P98095 1184 aa12.71□□□□□ -0.38
NEMF-215ENST00000557380 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.38
NEMF-215ENST00000557380 CDK13Q14004 1512 aaKnown RBP12.7□□□□□ -0.38
NEMF-215ENST00000557380 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
NEMF-215ENST00000557380 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
NEMF-215ENST00000557380 MIA2Q96PC5 1412 aa12.68□□□□□ -0.38
NEMF-215ENST00000557380 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
NEMF-215ENST00000557380 PTPN23Q9H3S7 1636 aa12.67□□□□□ -0.38
NEMF-215ENST00000557380 ITGAEP38570 1179 aa12.67□□□□□ -0.38
NEMF-215ENST00000557380 CDK11AQ9UQ88 783 aaPredicted RBP12.66□□□□□ -0.38
NEMF-215ENST00000557380 CHD1O14646 1710 aa12.66□□□□□ -0.38
NEMF-215ENST00000557380 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
NEMF-215ENST00000557380 ABCA8O94911 1581 aa12.65□□□□□ -0.38
NEMF-215ENST00000557380 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
NEMF-215ENST00000557380 HFM1A2PYH4 1435 aa12.63□□□□□ -0.39
NEMF-215ENST00000557380 PLB1Q6P1J6 1458 aa12.63□□□□□ -0.39
NEMF-215ENST00000557380 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
NEMF-215ENST00000557380 ADCY10Q96PN6 1610 aa12.62□□□□□ -0.39
NEMF-215ENST00000557380 PTPRKQ15262 1439 aa12.61□□□□□ -0.39
NEMF-215ENST00000557380 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
NEMF-215ENST00000557380 PRG4Q92954 1404 aaPredicted RBP12.6□□□□□ -0.39
NEMF-215ENST00000557380 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
NEMF-215ENST00000557380 PTPRGP23470 1445 aa12.57□□□□□ -0.4
NEMF-215ENST00000557380 NAIPQ13075 1403 aa12.57□□□□□ -0.4
NEMF-215ENST00000557380 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
NEMF-215ENST00000557380 ITSN2Q9NZM3 1697 aa12.56□□□□□ -0.4
NEMF-215ENST00000557380 ATP10BO94823 1461 aa12.56□□□□□ -0.4
NEMF-215ENST00000557380 GCC2Q8IWJ2 1684 aa12.55□□□□□ -0.4
NEMF-215ENST00000557380 CLASP1Q7Z460 1538 aa12.55□□□□□ -0.4
NEMF-215ENST00000557380 ACIN1Q9UKV3 1341 aaKnown RBP12.55□□□□□ -0.4
NEMF-215ENST00000557380 ARID3CA6NKF2 412 aa12.54□□□□□ -0.4
NEMF-215ENST00000557380 UACAQ9BZF9 1416 aa12.54□□□□□ -0.4
NEMF-215ENST00000557380 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
NEMF-215ENST00000557380 DNMT1P26358 1616 aaKnown RBP12.53□□□□□ -0.4
NEMF-215ENST00000557380 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
NEMF-215ENST00000557380 GPATCH8Q9UKJ3 1502 aaKnown RBP12.53□□□□□ -0.4
NEMF-215ENST00000557380 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
NEMF-215ENST00000557380 KIF14Q15058 1648 aa12.52□□□□□ -0.41
NEMF-215ENST00000557380 DAPK1P53355 1430 aa12.51□□□□□ -0.41
NEMF-215ENST00000557380 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
NEMF-215ENST00000557380 ABCC5O15440 1437 aa12.49□□□□□ -0.41
NEMF-215ENST00000557380 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
NEMF-215ENST00000557380 CAMSAP2Q08AD1 1489 aa12.48□□□□□ -0.41
NEMF-215ENST00000557380 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
NEMF-215ENST00000557380 ABCC2Q92887 1545 aa12.48□□□□□ -0.41
NEMF-215ENST00000557380 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
NEMF-215ENST00000557380 CDC42BPAQ5VT25 1732 aa12.47□□□□□ -0.41
NEMF-215ENST00000557380 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.42
NEMF-215ENST00000557380 ERCC6L2Q5T890 1561 aa12.46□□□□□ -0.42
NEMF-215ENST00000557380 ADGRL2O95490 1459 aa12.45□□□□□ -0.42
NEMF-215ENST00000557380 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
NEMF-215ENST00000557380 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
NEMF-215ENST00000557380 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
NEMF-215ENST00000557380 RRP7BPQ9NSQ0 103 aa12.44□□□□□ -0.42
NEMF-215ENST00000557380 CHIC2Q9UKJ5 165 aa12.43□□□□□ -0.42
NEMF-215ENST00000557380 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
NEMF-215ENST00000557380 KDM6BO15054 1643 aa12.41□□□□□ -0.42
NEMF-215ENST00000557380 NCOA1Q15788 1441 aa12.41□□□□□ -0.42
NEMF-215ENST00000557380 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
NEMF-215ENST00000557380 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
NEMF-215ENST00000557380 SIN3AQ96ST3 1273 aa12.4□□□□□ -0.42
NEMF-215ENST00000557380 KDM5BQ9UGL1 1544 aa12.4□□□□□ -0.42
NEMF-215ENST00000557380 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
NEMF-215ENST00000557380 ANKRD30AQ9BXX3 1397 aa12.38□□□□□ -0.43
NEMF-215ENST00000557380 CDC42BPBQ9Y5S2 1711 aa12.37□□□□□ -0.43
NEMF-215ENST00000557380 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
NEMF-215ENST00000557380 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
NEMF-215ENST00000557380 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
NEMF-215ENST00000557380 NEUROD1Q13562 356 aa12.37□□□□□ -0.43
NEMF-215ENST00000557380 ZCCHC11Q5TAX3 1644 aaKnown RBP12.36□□□□□ -0.43
NEMF-215ENST00000557380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.36□□□□□ -0.43
NEMF-215ENST00000557380 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
NEMF-215ENST00000557380 MBD5Q9P267 1494 aa12.36□□□□□ -0.43
NEMF-215ENST00000557380 ZNF777Q9ULD5 760 aaPredicted RBP12.35□□□□□ -0.43
NEMF-215ENST00000557380 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
NEMF-215ENST00000557380 TTC37Q6PGP7 1564 aa12.34□□□□□ -0.43
NEMF-215ENST00000557380 TONSLQ96HA7 1378 aa12.34□□□□□ -0.43
NEMF-215ENST00000557380 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
NEMF-215ENST00000557380 C9orf84Q5VXU9 1444 aa12.34□□□□□ -0.43
NEMF-215ENST00000557380 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
NEMF-215ENST00000557380 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
NEMF-215ENST00000557380 CCDC141Q6ZP82 1450 aa12.33□□□□□ -0.44
NEMF-215ENST00000557380 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
NEMF-215ENST00000557380 MAST1Q9Y2H9 1570 aa12.32□□□□□ -0.44
NEMF-215ENST00000557380 TSPY4P0CV99 314 aa12.31□□□□□ -0.44
NEMF-215ENST00000557380 TSPY10P0CW01 314 aa12.31□□□□□ -0.44
NEMF-215ENST00000557380 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
NEMF-215ENST00000557380 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
NEMF-215ENST00000557380 PZPP20742 1482 aa12.31□□□□□ -0.44
NEMF-215ENST00000557380 ARHGAP5Q13017 1502 aa12.3□□□□□ -0.44
NEMF-215ENST00000557380 ARAP3Q8WWN8 1544 aa12.3□□□□□ -0.44
NEMF-215ENST00000557380 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
NEMF-215ENST00000557380 PLCH2O75038 1416 aa12.3□□□□□ -0.44
NEMF-215ENST00000557380 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
NEMF-215ENST00000557380 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
NEMF-215ENST00000557380 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
NEMF-215ENST00000557380 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
NEMF-215ENST00000557380 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
NEMF-215ENST00000557380 RPRD2Q5VT52 1461 aaKnown RBP12.27□□□□□ -0.44
NEMF-215ENST00000557380 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms