RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TRIM44Q96DX7 344 aaPredicted RBP10.69□□□□□ -0.7
CHD8-213ENST00000557364 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
CHD8-213ENST00000557364 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
CHD8-213ENST00000557364 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
CHD8-213ENST00000557364 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
CHD8-213ENST00000557364 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
CHD8-213ENST00000557364 ANO8Q9HCE9 1232 aaPredicted RBP10.66□□□□□ -0.7
CHD8-213ENST00000557364 RAPGEF2Q9Y4G8 1499 aa10.66□□□□□ -0.7
CHD8-213ENST00000557364 KTN1Q86UP2 1357 aaKnown RBP10.66□□□□□ -0.7
CHD8-213ENST00000557364 PAK3O75914 559 aaPredicted RBP10.66□□□□□ -0.7
CHD8-213ENST00000557364 WASHC2CQ9Y4E1 1318 aa10.66□□□□□ -0.7
CHD8-213ENST00000557364 GPATCH3Q96I76 525 aa10.65□□□□□ -0.7
CHD8-213ENST00000557364 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.71
CHD8-213ENST00000557364 NUP155O75694 1391 aa10.64□□□□□ -0.71
CHD8-213ENST00000557364 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
CHD8-213ENST00000557364 AEBP2Q6ZN18 517 aaPredicted RBP10.64□□□□□ -0.71
CHD8-213ENST00000557364 ROCK2O75116 1388 aaKnown RBP10.63□□□□□ -0.71
CHD8-213ENST00000557364 SMARCA4P51532 1647 aa10.63□□□□□ -0.71
CHD8-213ENST00000557364 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
CHD8-213ENST00000557364 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
CHD8-213ENST00000557364 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
CHD8-213ENST00000557364 RALBP1Q15311 655 aa10.62□□□□□ -0.71
CHD8-213ENST00000557364 STK31Q9BXU1 1019 aa10.62□□□□□ -0.71
CHD8-213ENST00000557364 TDRD9Q8NDG6 1382 aaKnown RBP10.62□□□□□ -0.71
CHD8-213ENST00000557364 KIF3BO15066 747 aa10.61□□□□□ -0.71
CHD8-213ENST00000557364 PTMAP06454 111 aaKnown RBP10.61□□□□□ -0.71
CHD8-213ENST00000557364 PKD2Q13563 968 aa10.61□□□□□ -0.71
CHD8-213ENST00000557364 G3V3G9 751 aa10.61□□□□□ -0.71
CHD8-213ENST00000557364 HTATSF1O43719 755 aaKnown RBP10.61□□□□□ -0.71
CHD8-213ENST00000557364 DCAF8Q5TAQ9 597 aa10.61□□□□□ -0.71
CHD8-213ENST00000557364 TNNT2P45379 298 aaPredicted RBP10.61□□□□□ -0.71
CHD8-213ENST00000557364 MROH2BQ7Z745 1585 aa10.61□□□□□ -0.71
CHD8-213ENST00000557364 NGDNQ8NEJ9 315 aaKnown RBP10.61□□□□□ -0.71
CHD8-213ENST00000557364 JPH4Q96JJ6 628 aa10.6□□□□□ -0.71
CHD8-213ENST00000557364 FRAT1Q92837 279 aaPredicted RBP10.6□□□□□ -0.71
CHD8-213ENST00000557364 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
CHD8-213ENST00000557364 CHMP4CQ96CF2 233 aa10.6□□□□□ -0.71
CHD8-213ENST00000557364 STK26Q9P289 416 aa10.6□□□□□ -0.71
CHD8-213ENST00000557364 PTMSP20962 102 aa10.6□□□□□ -0.71
CHD8-213ENST00000557364 CHAF1AQ13111 956 aaPredicted RBP10.6□□□□□ -0.71
CHD8-213ENST00000557364 PHLDB1Q86UU1 1377 aa10.59□□□□□ -0.71
CHD8-213ENST00000557364 FANCD2Q9BXW9 1451 aa10.59□□□□□ -0.71
CHD8-213ENST00000557364 GNL2Q13823 731 aaKnown RBP10.59□□□□□ -0.71
CHD8-213ENST00000557364 HMMRO75330 724 aa10.58□□□□□ -0.72
CHD8-213ENST00000557364 HMGB2P26583 209 aaKnown RBP10.58□□□□□ -0.72
CHD8-213ENST00000557364 FOXD1Q16676 465 aa10.58□□□□□ -0.72
CHD8-213ENST00000557364 PTPRGP23470 1445 aa10.58□□□□□ -0.72
CHD8-213ENST00000557364 HSP90AB1P08238 724 aaKnown RBP10.58□□□□□ -0.72
CHD8-213ENST00000557364 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
CHD8-213ENST00000557364 WASHC2AQ641Q2 1341 aa10.58□□□□□ -0.72
CHD8-213ENST00000557364 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHD8-213ENST00000557364 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
CHD8-213ENST00000557364 VGFO15240 615 aaPredicted RBP10.58□□□□□ -0.72
CHD8-213ENST00000557364 TAF7LQ5H9L4 462 aa10.58□□□□□ -0.72
CHD8-213ENST00000557364 STAC3Q96MF2 364 aa10.57□□□□□ -0.72
CHD8-213ENST00000557364 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
CHD8-213ENST00000557364 GORABQ5T7V8 394 aa10.57□□□□□ -0.72
CHD8-213ENST00000557364 ATAD2BQ9ULI0 1458 aa10.56□□□□□ -0.72
CHD8-213ENST00000557364 SOX12O15370 315 aa10.56□□□□□ -0.72
CHD8-213ENST00000557364 KIAA2012Q0VF49 1180 aa10.56□□□□□ -0.72
CHD8-213ENST00000557364 WIZO95785 1651 aa10.56□□□□□ -0.72
CHD8-213ENST00000557364 AMPHP49418 695 aa10.56□□□□□ -0.72
CHD8-213ENST00000557364 HSCBQ8IWL3 235 aa10.55□□□□□ -0.72
CHD8-213ENST00000557364 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
CHD8-213ENST00000557364 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
CHD8-213ENST00000557364 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
CHD8-213ENST00000557364 CCER2I3L3R5 266 aa10.55□□□□□ -0.72
CHD8-213ENST00000557364 SAFB2Q14151 953 aaKnown RBP eCLIP10.55□□□□□ -0.72
CHD8-213ENST00000557364 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
CHD8-213ENST00000557364 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
CHD8-213ENST00000557364 CCDC144AA2RUR9 1427 aa10.54□□□□□ -0.72
CHD8-213ENST00000557364 CLSTN1O94985 981 aa10.54□□□□□ -0.72
CHD8-213ENST00000557364 U2AF1L5P0DN76 240 aaPredicted RBP10.53□□□□□ -0.72
CHD8-213ENST00000557364 U2AF1Q01081 240 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHD8-213ENST00000557364 KIF3AQ9Y496 699 aa10.53□□□□□ -0.72
CHD8-213ENST00000557364 MPHOSPH9Q99550 1183 aa10.53□□□□□ -0.72
CHD8-213ENST00000557364 EVA1CP58658 441 aa10.52□□□□□ -0.72
CHD8-213ENST00000557364 WWC1Q8IX03 1113 aa10.52□□□□□ -0.72
CHD8-213ENST00000557364 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.73
CHD8-213ENST00000557364 ERICH6BQ5W0A0 696 aa10.51□□□□□ -0.73
CHD8-213ENST00000557364 EVC2Q86UK5 1308 aa10.51□□□□□ -0.73
CHD8-213ENST00000557364 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
CHD8-213ENST00000557364 MEX3CQ5U5Q3 659 aaKnown RBP10.51□□□□□ -0.73
CHD8-213ENST00000557364 CUX1P39880 1505 aa10.51□□□□□ -0.73
CHD8-213ENST00000557364 DNTTIP2Q5QJE6 756 aaKnown RBP10.51□□□□□ -0.73
CHD8-213ENST00000557364 MIER1Q8N108 512 aa10.51□□□□□ -0.73
CHD8-213ENST00000557364 C1orf141Q5JVX7 400 aa10.5□□□□□ -0.73
CHD8-213ENST00000557364 GAPVD1Q14C86 1478 aa10.5□□□□□ -0.73
CHD8-213ENST00000557364 ZNF330Q9Y3S2 320 aaPredicted RBP10.5□□□□□ -0.73
CHD8-213ENST00000557364 CSPP1Q1MSJ5 1256 aa10.49□□□□□ -0.73
CHD8-213ENST00000557364 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
CHD8-213ENST00000557364 AMOTL1Q8IY63 956 aa10.49□□□□□ -0.73
CHD8-213ENST00000557364 NGEFQ8N5V2 710 aa10.49□□□□□ -0.73
CHD8-213ENST00000557364 TPM4P67936 248 aa10.48□□□□□ -0.73
CHD8-213ENST00000557364 CYB5RLQ6IPT4 315 aa10.48□□□□□ -0.73
CHD8-213ENST00000557364 CGNL1Q0VF96 1302 aa10.48□□□□□ -0.73
CHD8-213ENST00000557364 HNRNPMP52272 730 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHD8-213ENST00000557364 COG3Q96JB2 828 aa10.47□□□□□ -0.73
CHD8-213ENST00000557364 NOL10Q9BSC4 688 aaKnown RBP10.47□□□□□ -0.73
CHD8-213ENST00000557364 SYAP1Q96A49 352 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms