RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 ADGRL1O94910 1474 aa12.33□□□□□ -0.44
PSEN1-222ENST00000557356 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
PSEN1-222ENST00000557356 MAGI2Q86UL8 1455 aa12.31□□□□□ -0.44
PSEN1-222ENST00000557356 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
PSEN1-222ENST00000557356 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
PSEN1-222ENST00000557356 MAP3K1Q13233 1512 aa12.3□□□□□ -0.44
PSEN1-222ENST00000557356 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
PSEN1-222ENST00000557356 ZNF777Q9ULD5 760 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-222ENST00000557356 PLEKHH2Q8IVE3 1493 aa12.28□□□□□ -0.44
PSEN1-222ENST00000557356 EHBP1L1Q8N3D4 1523 aa12.28□□□□□ -0.44
PSEN1-222ENST00000557356 RSPH4AQ5TD94 716 aa12.28□□□□□ -0.44
PSEN1-222ENST00000557356 ZNF518AQ6AHZ1 1483 aa12.27□□□□□ -0.44
PSEN1-222ENST00000557356 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.44
PSEN1-222ENST00000557356 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
PSEN1-222ENST00000557356 ARID4BQ4LE39 1312 aaPredicted RBP12.27□□□□□ -0.45
PSEN1-222ENST00000557356 POGZQ7Z3K3 1410 aa12.27□□□□□ -0.45
PSEN1-222ENST00000557356 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
PSEN1-222ENST00000557356 KIAA1107Q9UPP5 1409 aa12.26□□□□□ -0.45
PSEN1-222ENST00000557356 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
PSEN1-222ENST00000557356 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
PSEN1-222ENST00000557356 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
PSEN1-222ENST00000557356 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
PSEN1-222ENST00000557356 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
PSEN1-222ENST00000557356 RICTORQ6R327 1708 aa12.22□□□□□ -0.45
PSEN1-222ENST00000557356 CDC42BPBQ9Y5S2 1711 aa12.22□□□□□ -0.45
PSEN1-222ENST00000557356 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
PSEN1-222ENST00000557356 ATP10AO60312 1499 aa12.21□□□□□ -0.45
PSEN1-222ENST00000557356 NCOA2Q15596 1464 aa12.21□□□□□ -0.45
PSEN1-222ENST00000557356 SPAG9O60271 1321 aaKnown RBP12.21□□□□□ -0.45
PSEN1-222ENST00000557356 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.45
PSEN1-222ENST00000557356 KANK4Q5T7N3 995 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-222ENST00000557356 FRMPD1Q5SYB0 1578 aa12.21□□□□□ -0.46
PSEN1-222ENST00000557356 MLH3Q9UHC1 1453 aa12.21□□□□□ -0.46
PSEN1-222ENST00000557356 CDC42BPAQ5VT25 1732 aa12.2□□□□□ -0.46
PSEN1-222ENST00000557356 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
PSEN1-222ENST00000557356 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
PSEN1-222ENST00000557356 ABCC1P33527 1531 aa12.19□□□□□ -0.46
PSEN1-222ENST00000557356 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
PSEN1-222ENST00000557356 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
PSEN1-222ENST00000557356 ARHGEF40Q8TER5 1519 aa12.18□□□□□ -0.46
PSEN1-222ENST00000557356 C9orf84Q5VXU9 1444 aa12.18□□□□□ -0.46
PSEN1-222ENST00000557356 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
PSEN1-222ENST00000557356 YEATS2Q9ULM3 1422 aa12.18□□□□□ -0.46
PSEN1-222ENST00000557356 KDM5CP41229 1560 aa12.18□□□□□ -0.46
PSEN1-222ENST00000557356 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
PSEN1-222ENST00000557356 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-222ENST00000557356 SAMD9LQ8IVG5 1584 aa12.15□□□□□ -0.46
PSEN1-222ENST00000557356 RTEL1-TNFRSF6BF6WH68 1400 aa12.15□□□□□ -0.46
PSEN1-222ENST00000557356 MYOM3Q5VTT5 1437 aa12.15□□□□□ -0.46
PSEN1-222ENST00000557356 ESF1Q9H501 851 aaKnown RBP12.15□□□□□ -0.46
PSEN1-222ENST00000557356 HECW2Q9P2P5 1572 aa12.14□□□□□ -0.47
PSEN1-222ENST00000557356 SYCP2Q9BX26 1530 aa12.14□□□□□ -0.47
PSEN1-222ENST00000557356 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
PSEN1-222ENST00000557356 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
PSEN1-222ENST00000557356 MLECQ14165 292 aa12.12□□□□□ -0.47
PSEN1-222ENST00000557356 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
PSEN1-222ENST00000557356 CAMSAP2Q08AD1 1489 aa12.11□□□□□ -0.47
PSEN1-222ENST00000557356 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
PSEN1-222ENST00000557356 AGLP35573 1532 aa12.1□□□□□ -0.47
PSEN1-222ENST00000557356 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
PSEN1-222ENST00000557356 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
PSEN1-222ENST00000557356 ADAMTSL3P82987 1691 aa12.09□□□□□ -0.47
PSEN1-222ENST00000557356 PTPRMP28827 1452 aa12.08□□□□□ -0.47
PSEN1-222ENST00000557356 FOXD1Q16676 465 aa12.08□□□□□ -0.48
PSEN1-222ENST00000557356 DIP2CQ9Y2E4 1556 aa12.08□□□□□ -0.48
PSEN1-222ENST00000557356 A2MP01023 1474 aa12.08□□□□□ -0.48
PSEN1-222ENST00000557356 DHX29Q7Z478 1369 aaKnown RBP12.07□□□□□ -0.48
PSEN1-222ENST00000557356 ARHGEF5Q12774 1597 aa12.07□□□□□ -0.48
PSEN1-222ENST00000557356 KIDINS220Q9ULH0 1771 aa12.07□□□□□ -0.48
PSEN1-222ENST00000557356 CNTLNQ9NXG0 1405 aa12.06□□□□□ -0.48
PSEN1-222ENST00000557356 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
PSEN1-222ENST00000557356 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
PSEN1-222ENST00000557356 KIF3BO15066 747 aa12.04□□□□□ -0.48
PSEN1-222ENST00000557356 GGT6Q6P531 493 aa12.04□□□□□ -0.48
PSEN1-222ENST00000557356 INO80Q9ULG1 1556 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-222ENST00000557356 FAM50AQ14320 339 aaKnown RBP12.03□□□□□ -0.48
PSEN1-222ENST00000557356 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.48
PSEN1-222ENST00000557356 MADDQ8WXG6 1647 aa12.02□□□□□ -0.49
PSEN1-222ENST00000557356 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
PSEN1-222ENST00000557356 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
PSEN1-222ENST00000557356 PTPN23Q9H3S7 1636 aa12□□□□□ -0.49
PSEN1-222ENST00000557356 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
PSEN1-222ENST00000557356 MAST1Q9Y2H9 1570 aa12□□□□□ -0.49
PSEN1-222ENST00000557356 WASHC2CQ9Y4E1 1318 aa11.99□□□□□ -0.49
PSEN1-222ENST00000557356 ABCC5O15440 1437 aa11.99□□□□□ -0.49
PSEN1-222ENST00000557356 DAPK1P53355 1430 aa11.99□□□□□ -0.49
PSEN1-222ENST00000557356 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
PSEN1-222ENST00000557356 RIMS1Q86UR5 1692 aaKnown RBP11.98□□□□□ -0.49
PSEN1-222ENST00000557356 PLXNC1O60486 1568 aa11.98□□□□□ -0.49
PSEN1-222ENST00000557356 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
PSEN1-222ENST00000557356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.98□□□□□ -0.49
PSEN1-222ENST00000557356 CEBPAP49715 358 aaPredicted RBP11.98□□□□□ -0.49
PSEN1-222ENST00000557356 RRP7BPQ9NSQ0 103 aa11.98□□□□□ -0.49
PSEN1-222ENST00000557356 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
PSEN1-222ENST00000557356 FER1L4A9Z1Z3 1794 aa11.97□□□□□ -0.49
PSEN1-222ENST00000557356 KIF15Q9NS87 1388 aa11.96□□□□□ -0.49
PSEN1-222ENST00000557356 CHIC2Q9UKJ5 165 aa11.96□□□□□ -0.49
PSEN1-222ENST00000557356 DUOX2Q9NRD8 1548 aa11.96□□□□□ -0.5
PSEN1-222ENST00000557356 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.5
PSEN1-222ENST00000557356 PPARGC1BQ86YN6 1023 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms