RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.32
APEX1-218ENST00000557344 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
APEX1-218ENST00000557344 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
APEX1-218ENST00000557344 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
APEX1-218ENST00000557344 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
APEX1-218ENST00000557344 ATP10AO60312 1499 aa16.99■□□□□ 0.31
APEX1-218ENST00000557344 PLCH2O75038 1416 aa16.99■□□□□ 0.31
APEX1-218ENST00000557344 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
APEX1-218ENST00000557344 PREX1Q8TCU6 1659 aa16.97■□□□□ 0.31
APEX1-218ENST00000557344 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.31
APEX1-218ENST00000557344 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
APEX1-218ENST00000557344 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
APEX1-218ENST00000557344 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
APEX1-218ENST00000557344 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
APEX1-218ENST00000557344 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.3
APEX1-218ENST00000557344 PTPRTO14522 1441 aa16.89■□□□□ 0.29
APEX1-218ENST00000557344 EEA1Q15075 1411 aa16.88■□□□□ 0.29
APEX1-218ENST00000557344 ZNF518AQ6AHZ1 1483 aa16.87■□□□□ 0.29
APEX1-218ENST00000557344 AFAP1Q8N556 730 aa16.87■□□□□ 0.29
APEX1-218ENST00000557344 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
APEX1-218ENST00000557344 KDM5CP41229 1560 aa16.84■□□□□ 0.29
APEX1-218ENST00000557344 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
APEX1-218ENST00000557344 LTBP4Q8N2S1 1624 aa16.83■□□□□ 0.28
APEX1-218ENST00000557344 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
APEX1-218ENST00000557344 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
APEX1-218ENST00000557344 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
APEX1-218ENST00000557344 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
APEX1-218ENST00000557344 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
APEX1-218ENST00000557344 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
APEX1-218ENST00000557344 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
APEX1-218ENST00000557344 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
APEX1-218ENST00000557344 C3P01024 1663 aa16.8■□□□□ 0.28
APEX1-218ENST00000557344 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
APEX1-218ENST00000557344 KIF14Q15058 1648 aa16.79■□□□□ 0.28
APEX1-218ENST00000557344 MLH3Q9UHC1 1453 aa16.79■□□□□ 0.28
APEX1-218ENST00000557344 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
APEX1-218ENST00000557344 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
APEX1-218ENST00000557344 TROQ12816 1431 aaPredicted RBP16.78■□□□□ 0.28
APEX1-218ENST00000557344 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
APEX1-218ENST00000557344 AGLP35573 1532 aa16.77■□□□□ 0.28
APEX1-218ENST00000557344 ABCA6Q8N139 1617 aa16.75■□□□□ 0.27
APEX1-218ENST00000557344 CLIP1P30622 1438 aa16.74■□□□□ 0.27
APEX1-218ENST00000557344 CNTLNQ9NXG0 1405 aa16.73■□□□□ 0.27
APEX1-218ENST00000557344 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
APEX1-218ENST00000557344 NPATQ14207 1427 aa16.7■□□□□ 0.26
APEX1-218ENST00000557344 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
APEX1-218ENST00000557344 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
APEX1-218ENST00000557344 CAMSAP1Q5T5Y3 1602 aa16.69■□□□□ 0.26
APEX1-218ENST00000557344 ABCC1P33527 1531 aa16.69■□□□□ 0.26
APEX1-218ENST00000557344 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
APEX1-218ENST00000557344 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
APEX1-218ENST00000557344 NCKAP5LQ9HCH0 1330 aa16.68■□□□□ 0.26
APEX1-218ENST00000557344 ZMYM3Q14202 1370 aa16.67■□□□□ 0.26
APEX1-218ENST00000557344 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
APEX1-218ENST00000557344 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
APEX1-218ENST00000557344 PREX2Q70Z35 1606 aa16.65■□□□□ 0.26
APEX1-218ENST00000557344 PKD2Q13563 968 aa16.64■□□□□ 0.25
APEX1-218ENST00000557344 ITSN2Q9NZM3 1697 aa16.64■□□□□ 0.25
APEX1-218ENST00000557344 LRRIQ1Q96JM4 1722 aa16.64■□□□□ 0.25
APEX1-218ENST00000557344 MROH2AA6NES4 1674 aa16.63■□□□□ 0.25
APEX1-218ENST00000557344 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
APEX1-218ENST00000557344 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
APEX1-218ENST00000557344 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
APEX1-218ENST00000557344 SPAG9O60271 1321 aaKnown RBP16.58■□□□□ 0.24
APEX1-218ENST00000557344 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
APEX1-218ENST00000557344 PTPRKQ15262 1439 aa16.57■□□□□ 0.24
APEX1-218ENST00000557344 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
APEX1-218ENST00000557344 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
APEX1-218ENST00000557344 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
APEX1-218ENST00000557344 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
APEX1-218ENST00000557344 ZNF777Q9ULD5 760 aaPredicted RBP16.56■□□□□ 0.24
APEX1-218ENST00000557344 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
APEX1-218ENST00000557344 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
APEX1-218ENST00000557344 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
APEX1-218ENST00000557344 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
APEX1-218ENST00000557344 CLTCQ00610 1675 aaKnown RBP16.54■□□□□ 0.24
APEX1-218ENST00000557344 HSPA1LP34931 641 aa16.54■□□□□ 0.24
APEX1-218ENST00000557344 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
APEX1-218ENST00000557344 A2MP01023 1474 aa16.53■□□□□ 0.24
APEX1-218ENST00000557344 PLXNC1O60486 1568 aa16.52■□□□□ 0.24
APEX1-218ENST00000557344 GPATCH8Q9UKJ3 1502 aaKnown RBP16.52■□□□□ 0.24
APEX1-218ENST00000557344 GGT6Q6P531 493 aa16.52■□□□□ 0.24
APEX1-218ENST00000557344 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
APEX1-218ENST00000557344 KIAA1107Q9UPP5 1409 aa16.51■□□□□ 0.23
APEX1-218ENST00000557344 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
APEX1-218ENST00000557344 PIP4K2BP78356 416 aa16.5■□□□□ 0.23
APEX1-218ENST00000557344 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
APEX1-218ENST00000557344 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
APEX1-218ENST00000557344 TOM1O60784 492 aa16.49■□□□□ 0.23
APEX1-218ENST00000557344 INO80Q9ULG1 1556 aaPredicted RBP16.49■□□□□ 0.23
APEX1-218ENST00000557344 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
APEX1-218ENST00000557344 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
APEX1-218ENST00000557344 CPS1P31327 1500 aa16.46■□□□□ 0.23
APEX1-218ENST00000557344 DNMT1P26358 1616 aaKnown RBP16.46■□□□□ 0.23
APEX1-218ENST00000557344 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
APEX1-218ENST00000557344 SHANK2Q9UPX8 1470 aa16.45■□□□□ 0.22
APEX1-218ENST00000557344 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
APEX1-218ENST00000557344 CCNB3Q8WWL7 1395 aa16.42■□□□□ 0.22
APEX1-218ENST00000557344 FBXO31Q5XUX0 539 aaPredicted RBP16.41■□□□□ 0.22
APEX1-218ENST00000557344 ADGBQ8N7X0 1667 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms