RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 U2SURPO15042 1029 aaKnown RBP15.32■□□□□ 0.04
NEK9-210ENST00000557026 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
NEK9-210ENST00000557026 L1TD1Q5T7N2 865 aaKnown RBP15.31■□□□□ 0.04
NEK9-210ENST00000557026 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
NEK9-210ENST00000557026 FGD1P98174 961 aa15.31■□□□□ 0.04
NEK9-210ENST00000557026 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
NEK9-210ENST00000557026 JPH4Q96JJ6 628 aa15.3■□□□□ 0.04
NEK9-210ENST00000557026 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
NEK9-210ENST00000557026 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
NEK9-210ENST00000557026 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
NEK9-210ENST00000557026 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
NEK9-210ENST00000557026 RALBP1Q15311 655 aa15.28■□□□□ 0.04
NEK9-210ENST00000557026 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
NEK9-210ENST00000557026 KCNJ4P48050 445 aa15.28■□□□□ 0.04
NEK9-210ENST00000557026 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEK9-210ENST00000557026 PTPRGP23470 1445 aa15.27■□□□□ 0.03
NEK9-210ENST00000557026 NUP155O75694 1391 aa15.26■□□□□ 0.03
NEK9-210ENST00000557026 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
NEK9-210ENST00000557026 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
NEK9-210ENST00000557026 GLIPR1L2Q4G1C9 344 aa15.26■□□□□ 0.03
NEK9-210ENST00000557026 PKD2Q13563 968 aa15.26■□□□□ 0.03
NEK9-210ENST00000557026 KIF3BO15066 747 aa15.25■□□□□ 0.03
NEK9-210ENST00000557026 CCDC34Q96HJ3 373 aa15.24■□□□□ 0.03
NEK9-210ENST00000557026 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
NEK9-210ENST00000557026 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
NEK9-210ENST00000557026 FOXD1Q16676 465 aa15.22■□□□□ 0.03
NEK9-210ENST00000557026 HTATSF1O43719 755 aaKnown RBP15.22■□□□□ 0.03
NEK9-210ENST00000557026 PTMSP20962 102 aa15.22■□□□□ 0.03
NEK9-210ENST00000557026 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
NEK9-210ENST00000557026 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
NEK9-210ENST00000557026 FANCD2Q9BXW9 1451 aa15.22■□□□□ 0.03
NEK9-210ENST00000557026 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
NEK9-210ENST00000557026 GPATCH3Q96I76 525 aa15.22■□□□□ 0.03
NEK9-210ENST00000557026 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.02
NEK9-210ENST00000557026 TRIM44Q96DX7 344 aaPredicted RBP15.2■□□□□ 0.02
NEK9-210ENST00000557026 NGDNQ8NEJ9 315 aaKnown RBP15.19■□□□□ 0.02
NEK9-210ENST00000557026 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
NEK9-210ENST00000557026 WWC1Q8IX03 1113 aa15.19■□□□□ 0.02
NEK9-210ENST00000557026 HMMRO75330 724 aa15.19■□□□□ 0.02
NEK9-210ENST00000557026 ERICH6BQ5W0A0 696 aa15.18■□□□□ 0.02
NEK9-210ENST00000557026 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
NEK9-210ENST00000557026 NGEFQ8N5V2 710 aa15.17■□□□□ 0.02
NEK9-210ENST00000557026 KIAA1211Q6ZU35 1233 aa15.17■□□□□ 0.02
NEK9-210ENST00000557026 NEUROD2Q15784 382 aa15.16■□□□□ 0.02
NEK9-210ENST00000557026 GOLGA6L4A6NEF3 574 aa15.15■□□□□ 0.02
NEK9-210ENST00000557026 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
NEK9-210ENST00000557026 G3V3G9 751 aa15.14■□□□□ 0.01
NEK9-210ENST00000557026 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
NEK9-210ENST00000557026 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
NEK9-210ENST00000557026 STK26Q9P289 416 aa15.13■□□□□ 0.01
NEK9-210ENST00000557026 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
NEK9-210ENST00000557026 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
NEK9-210ENST00000557026 CC2D1BQ5T0F9 858 aaKnown RBP15.12■□□□□ 0.01
NEK9-210ENST00000557026 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
NEK9-210ENST00000557026 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
NEK9-210ENST00000557026 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
NEK9-210ENST00000557026 PTMAP06454 111 aaKnown RBP15.11■□□□□ 0.01
NEK9-210ENST00000557026 AMPHP49418 695 aa15.11■□□□□ 0.01
NEK9-210ENST00000557026 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
NEK9-210ENST00000557026 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
NEK9-210ENST00000557026 PDE3BQ13370 1112 aa15.1■□□□□ 0.01
NEK9-210ENST00000557026 RWDD1Q9H446 243 aaPredicted RBP15.1■□□□□ 0.01
NEK9-210ENST00000557026 KIF3AQ9Y496 699 aa15.1■□□□□ 0.01
NEK9-210ENST00000557026 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
NEK9-210ENST00000557026 GORABQ5T7V8 394 aa15.09■□□□□ 0.01
NEK9-210ENST00000557026 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
NEK9-210ENST00000557026 EVC2Q86UK5 1308 aa15.09■□□□□ 0.01
NEK9-210ENST00000557026 HSP90AB1P08238 724 aaKnown RBP15.09■□□□□ 0.01
NEK9-210ENST00000557026 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
NEK9-210ENST00000557026 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
NEK9-210ENST00000557026 NCAPD3P42695 1498 aa15.08■□□□□ 0
NEK9-210ENST00000557026 HSCBQ8IWL3 235 aa15.08■□□□□ 0
NEK9-210ENST00000557026 GNL2Q13823 731 aaKnown RBP15.07■□□□□ 0
NEK9-210ENST00000557026 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
NEK9-210ENST00000557026 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
NEK9-210ENST00000557026 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ 0
NEK9-210ENST00000557026 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ -0
NEK9-210ENST00000557026 KIAA2012Q0VF49 1180 aa15.04■□□□□ -0
NEK9-210ENST00000557026 C1orf141Q5JVX7 400 aa15.04■□□□□ -0
NEK9-210ENST00000557026 EVA1CP58658 441 aa15.03■□□□□ -0
NEK9-210ENST00000557026 CSPP1Q1MSJ5 1256 aa15.03■□□□□ -0
NEK9-210ENST00000557026 ISY1Q9ULR0 285 aaKnown RBP15.03■□□□□ -0
NEK9-210ENST00000557026 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
NEK9-210ENST00000557026 COG3Q96JB2 828 aa15.03■□□□□ -0
NEK9-210ENST00000557026 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
NEK9-210ENST00000557026 SAFB2Q14151 953 aaKnown RBP eCLIP15.03■□□□□ -0
NEK9-210ENST00000557026 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
NEK9-210ENST00000557026 CYB5RLQ6IPT4 315 aa15.02■□□□□ -0
NEK9-210ENST00000557026 CGNL1Q0VF96 1302 aa15.02■□□□□ -0
NEK9-210ENST00000557026 PLEKHH2Q8IVE3 1493 aa15.02■□□□□ -0
NEK9-210ENST00000557026 SOX12O15370 315 aa15.02□□□□□ -0.01
NEK9-210ENST00000557026 MIER1Q8N108 512 aa15.02□□□□□ -0.01
NEK9-210ENST00000557026 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
NEK9-210ENST00000557026 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
NEK9-210ENST00000557026 CUX1P39880 1505 aa15.01□□□□□ -0.01
NEK9-210ENST00000557026 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
NEK9-210ENST00000557026 HSPA5P11021 654 aaKnown RBP15□□□□□ -0.01
NEK9-210ENST00000557026 NLRP13Q86W25 1043 aa15□□□□□ -0.01
NEK9-210ENST00000557026 AMOTL1Q8IY63 956 aa15□□□□□ -0.01
NEK9-210ENST00000557026 HIRIP3Q9BW71 556 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms