RNA–Protein interactions for RNA: ENST00000556787.5

PAPOLA-222, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-222ENST00000556787 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
PAPOLA-222ENST00000556787 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
PAPOLA-222ENST00000556787 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
PAPOLA-222ENST00000556787 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
PAPOLA-222ENST00000556787 PDE4AP27815 886 aa12.34□□□□□ -0.43
PAPOLA-222ENST00000556787 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
PAPOLA-222ENST00000556787 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
PAPOLA-222ENST00000556787 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
PAPOLA-222ENST00000556787 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
PAPOLA-222ENST00000556787 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
PAPOLA-222ENST00000556787 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
PAPOLA-222ENST00000556787 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
PAPOLA-222ENST00000556787 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
PAPOLA-222ENST00000556787 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
PAPOLA-222ENST00000556787 CADPS2Q86UW7 1296 aa12.19□□□□□ -0.46
PAPOLA-222ENST00000556787 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
PAPOLA-222ENST00000556787 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
PAPOLA-222ENST00000556787 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
PAPOLA-222ENST00000556787 NCKAP5LQ9HCH0 1330 aa12.14□□□□□ -0.47
PAPOLA-222ENST00000556787 ST18O60284 1047 aa12.14□□□□□ -0.47
PAPOLA-222ENST00000556787 FOXK1P85037 733 aa12.14□□□□□ -0.47
PAPOLA-222ENST00000556787 SNPHO15079 494 aa12.13□□□□□ -0.47
PAPOLA-222ENST00000556787 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
PAPOLA-222ENST00000556787 KIF3CO14782 793 aa12.11□□□□□ -0.47
PAPOLA-222ENST00000556787 MFSD10Q14728 455 aa12.11□□□□□ -0.47
PAPOLA-222ENST00000556787 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
PAPOLA-222ENST00000556787 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
PAPOLA-222ENST00000556787 DSG2Q14126 1118 aa12.09□□□□□ -0.47
PAPOLA-222ENST00000556787 E2F4Q16254 413 aa12.09□□□□□ -0.47
PAPOLA-222ENST00000556787 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
PAPOLA-222ENST00000556787 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
PAPOLA-222ENST00000556787 KDM2AQ9Y2K7 1162 aa12.08□□□□□ -0.48
PAPOLA-222ENST00000556787 TBC1D12O60347 775 aa12.06□□□□□ -0.48
PAPOLA-222ENST00000556787 DOK7Q18PE1 504 aa12.06□□□□□ -0.48
PAPOLA-222ENST00000556787 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
PAPOLA-222ENST00000556787 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
PAPOLA-222ENST00000556787 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
PAPOLA-222ENST00000556787 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
PAPOLA-222ENST00000556787 SLC34A2O95436 690 aa11.98□□□□□ -0.49
PAPOLA-222ENST00000556787 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
PAPOLA-222ENST00000556787 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
PAPOLA-222ENST00000556787 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.49
PAPOLA-222ENST00000556787 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
PAPOLA-222ENST00000556787 PTCD2Q8WV60 388 aaKnown RBP11.93□□□□□ -0.5
PAPOLA-222ENST00000556787 UPF1Q92900 1129 aaKnown RBP eCLIP11.93□□□□□ -0.5
PAPOLA-222ENST00000556787 NBR1Q14596 966 aa11.91□□□□□ -0.5
PAPOLA-222ENST00000556787 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
PAPOLA-222ENST00000556787 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
PAPOLA-222ENST00000556787 OXER1Q8TDS5 423 aa11.9□□□□□ -0.5
PAPOLA-222ENST00000556787 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
PAPOLA-222ENST00000556787 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
PAPOLA-222ENST00000556787 DPYSL4O14531 572 aa11.87□□□□□ -0.51
PAPOLA-222ENST00000556787 HOXB3P14651 431 aaPredicted RBP11.87□□□□□ -0.51
PAPOLA-222ENST00000556787 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
PAPOLA-222ENST00000556787 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
PAPOLA-222ENST00000556787 EMP3P54852 163 aa11.84□□□□□ -0.51
PAPOLA-222ENST00000556787 BCANQ96GW7 911 aa11.84□□□□□ -0.51
PAPOLA-222ENST00000556787 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
PAPOLA-222ENST00000556787 EVI5O60447 810 aa11.82□□□□□ -0.52
PAPOLA-222ENST00000556787 SMYD5Q6GMV2 418 aa11.82□□□□□ -0.52
PAPOLA-222ENST00000556787 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
PAPOLA-222ENST00000556787 GPR153Q6NV75 609 aa11.8□□□□□ -0.52
PAPOLA-222ENST00000556787 PDIA6Q15084 440 aa11.79□□□□□ -0.52
PAPOLA-222ENST00000556787 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
PAPOLA-222ENST00000556787 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
PAPOLA-222ENST00000556787 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
PAPOLA-222ENST00000556787 NUDT7P0C024 238 aa11.77□□□□□ -0.53
PAPOLA-222ENST00000556787 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
PAPOLA-222ENST00000556787 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
PAPOLA-222ENST00000556787 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
PAPOLA-222ENST00000556787 MMRN1Q13201 1228 aa11.75□□□□□ -0.53
PAPOLA-222ENST00000556787 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
PAPOLA-222ENST00000556787 ERBB3P21860 1342 aa11.72□□□□□ -0.53
PAPOLA-222ENST00000556787 PTGER2P43116 358 aa11.71□□□□□ -0.53
PAPOLA-222ENST00000556787 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.532e-9■■■■■ 33.1
PAPOLA-222ENST00000556787 EPAS1Q99814 870 aa11.7□□□□□ -0.54
PAPOLA-222ENST00000556787 KRTAP3-3Q9BYR6 98 aa11.7□□□□□ -0.54
PAPOLA-222ENST00000556787 KRTAP3-2Q9BYR7 98 aa11.7□□□□□ -0.54
PAPOLA-222ENST00000556787 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
PAPOLA-222ENST00000556787 SEMA3EO15041 775 aa11.69□□□□□ -0.54
PAPOLA-222ENST00000556787 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
PAPOLA-222ENST00000556787 PHF14O94880 888 aa11.68□□□□□ -0.54
PAPOLA-222ENST00000556787 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
PAPOLA-222ENST00000556787 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
PAPOLA-222ENST00000556787 DDX12PQ92771 950 aa11.67□□□□□ -0.54
PAPOLA-222ENST00000556787 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
PAPOLA-222ENST00000556787 TYW1BQ6NUM6 668 aa11.66□□□□□ -0.54
PAPOLA-222ENST00000556787 ZNF454Q8N9F8 522 aa11.66□□□□□ -0.54
PAPOLA-222ENST00000556787 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
PAPOLA-222ENST00000556787 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
PAPOLA-222ENST00000556787 TESPA1A2RU30 521 aaPredicted RBP11.65□□□□□ -0.54
PAPOLA-222ENST00000556787 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
PAPOLA-222ENST00000556787 FOSBP53539 338 aa11.62□□□□□ -0.55
PAPOLA-222ENST00000556787 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
PAPOLA-222ENST00000556787 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
PAPOLA-222ENST00000556787 PCDHGA10Q9Y5H3 936 aa11.59□□□□□ -0.55
PAPOLA-222ENST00000556787 MAP3K7O43318 606 aa11.58□□□□□ -0.56
PAPOLA-222ENST00000556787 RBM33Q96EV2 1170 aaKnown RBP11.56□□□□□ -0.56
PAPOLA-222ENST00000556787 OSBPP22059 807 aa11.55□□□□□ -0.56
PAPOLA-222ENST00000556787 PTPREP23469 700 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms