RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 ERICH6BQ5W0A0 696 aa23.97■■□□□ 1.43
RCCD1-204ENST00000555737 CDK13Q14004 1512 aaKnown RBP23.97■■□□□ 1.43
RCCD1-204ENST00000555737 MAGI3Q5TCQ9 1506 aa23.96■■□□□ 1.43
RCCD1-204ENST00000555737 RTL5Q5HYW3 569 aaPredicted RBP23.96■■□□□ 1.43
RCCD1-204ENST00000555737 ZBTB47Q9UFB7 747 aaPredicted RBP23.96■■□□□ 1.43
RCCD1-204ENST00000555737 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
RCCD1-204ENST00000555737 NUDCQ9Y266 331 aa23.95■■□□□ 1.42
RCCD1-204ENST00000555737 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
RCCD1-204ENST00000555737 LAS1LQ9Y4W2 734 aaKnown RBP23.93■■□□□ 1.42
RCCD1-204ENST00000555737 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
RCCD1-204ENST00000555737 PKD2Q13563 968 aa23.92■■□□□ 1.42
RCCD1-204ENST00000555737 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
RCCD1-204ENST00000555737 RTN4Q9NQC3 1192 aaKnown RBP23.91■■□□□ 1.42
RCCD1-204ENST00000555737 SUPT6HQ7KZ85 1726 aaKnown RBP23.91■■□□□ 1.42
RCCD1-204ENST00000555737 CC2D2AQ9P2K1 1620 aa23.91■■□□□ 1.42
RCCD1-204ENST00000555737 SKAP1Q86WV1 359 aa23.9■■□□□ 1.42
RCCD1-204ENST00000555737 FBLN2P98095 1184 aa23.89■■□□□ 1.42
RCCD1-204ENST00000555737 CARD11Q9BXL7 1154 aa23.89■■□□□ 1.41
RCCD1-204ENST00000555737 ANKRD30BQ9BXX2 1392 aa23.87■■□□□ 1.41
RCCD1-204ENST00000555737 EXOC6Q8TAG9 804 aa23.86■■□□□ 1.41
RCCD1-204ENST00000555737 CFDP1Q9UEE9 299 aaPredicted RBP23.86■■□□□ 1.41
RCCD1-204ENST00000555737 EHBP1L1Q8N3D4 1523 aa23.86■■□□□ 1.41
RCCD1-204ENST00000555737 CTTNBP2Q8WZ74 1663 aa23.86■■□□□ 1.41
RCCD1-204ENST00000555737 LRRIQ1Q96JM4 1722 aa23.85■■□□□ 1.41
RCCD1-204ENST00000555737 USP47Q96K76 1375 aa23.85■■□□□ 1.41
RCCD1-204ENST00000555737 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
RCCD1-204ENST00000555737 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
RCCD1-204ENST00000555737 IPO9Q96P70 1041 aaKnown RBP23.84■■□□□ 1.41
RCCD1-204ENST00000555737 PRDM2Q13029 1718 aa23.83■■□□□ 1.4
RCCD1-204ENST00000555737 PLIN1O60240 522 aa23.82■■□□□ 1.4
RCCD1-204ENST00000555737 ST20-MTHFSA0A0A6YYL1 179 aa23.81■■□□□ 1.4
RCCD1-204ENST00000555737 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
RCCD1-204ENST00000555737 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
RCCD1-204ENST00000555737 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
RCCD1-204ENST00000555737 CUL7Q14999 1698 aa23.79■■□□□ 1.4
RCCD1-204ENST00000555737 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
RCCD1-204ENST00000555737 PNISRQ8TF01 805 aaKnown RBP23.78■■□□□ 1.4
RCCD1-204ENST00000555737 RPRD2Q5VT52 1461 aaKnown RBP23.76■■□□□ 1.39
RCCD1-204ENST00000555737 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
RCCD1-204ENST00000555737 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
RCCD1-204ENST00000555737 CDCA7LQ96GN5 454 aa23.75■■□□□ 1.39
RCCD1-204ENST00000555737 DAPK1P53355 1430 aa23.74■■□□□ 1.39
RCCD1-204ENST00000555737 SMG6Q86US8 1419 aaKnown RBP23.74■■□□□ 1.39
RCCD1-204ENST00000555737 ABCC5O15440 1437 aa23.72■■□□□ 1.39
RCCD1-204ENST00000555737 DHX29Q7Z478 1369 aaKnown RBP23.72■■□□□ 1.39
RCCD1-204ENST00000555737 RCAN3Q9UKA8 241 aa23.7■■□□□ 1.38
RCCD1-204ENST00000555737 MYT1LQ9UL68 1186 aa23.7■■□□□ 1.38
RCCD1-204ENST00000555737 NEFMP07197 916 aa23.69■■□□□ 1.38
RCCD1-204ENST00000555737 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
RCCD1-204ENST00000555737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.69■■□□□ 1.389e-7■■□□□ 14.1
RCCD1-204ENST00000555737 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
RCCD1-204ENST00000555737 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
RCCD1-204ENST00000555737 RRP1P56182 461 aaKnown RBP23.68■■□□□ 1.38
RCCD1-204ENST00000555737 IL27Q8NEV9 243 aa23.68■■□□□ 1.38
RCCD1-204ENST00000555737 HECW1Q76N89 1606 aa23.67■■□□□ 1.38
RCCD1-204ENST00000555737 SLC4A3P48751 1232 aa23.67■■□□□ 1.38
RCCD1-204ENST00000555737 NUP155O75694 1391 aa23.66■■□□□ 1.38
RCCD1-204ENST00000555737 TCOF1Q13428 1488 aaKnown RBP23.65■■□□□ 1.38
RCCD1-204ENST00000555737 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
RCCD1-204ENST00000555737 PDE4AP27815 886 aa23.64■■□□□ 1.38
RCCD1-204ENST00000555737 MIA2Q96PC5 1412 aa23.64■■□□□ 1.37
RCCD1-204ENST00000555737 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
RCCD1-204ENST00000555737 ANO8Q9HCE9 1232 aaPredicted RBP23.59■■□□□ 1.37
RCCD1-204ENST00000555737 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
RCCD1-204ENST00000555737 HNRNPMP52272 730 aaKnown RBP eCLIP23.58■■□□□ 1.378e-13■■■□□ 16.5
RCCD1-204ENST00000555737 GCC2Q8IWJ2 1684 aa23.58■■□□□ 1.37
RCCD1-204ENST00000555737 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
RCCD1-204ENST00000555737 NBPF1Q3BBV0 1214 aa23.56■■□□□ 1.36
RCCD1-204ENST00000555737 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
RCCD1-204ENST00000555737 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
RCCD1-204ENST00000555737 KIF15Q9NS87 1388 aa23.54■■□□□ 1.36
RCCD1-204ENST00000555737 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
RCCD1-204ENST00000555737 CRBNQ96SW2 442 aa23.54■■□□□ 1.36
RCCD1-204ENST00000555737 RNF123Q5XPI4 1314 aa23.53■■□□□ 1.36
RCCD1-204ENST00000555737 PZPP20742 1482 aa23.52■■□□□ 1.36
RCCD1-204ENST00000555737 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
RCCD1-204ENST00000555737 KIAA1107Q9UPP5 1409 aa23.52■■□□□ 1.36
RCCD1-204ENST00000555737 BCORL1Q5H9F3 1711 aa23.52■■□□□ 1.36
RCCD1-204ENST00000555737 IQGAP2Q13576 1575 aa23.52■■□□□ 1.36
RCCD1-204ENST00000555737 ROCK1Q13464 1354 aa23.52■■□□□ 1.35
RCCD1-204ENST00000555737 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
RCCD1-204ENST00000555737 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.51■■□□□ 1.35
RCCD1-204ENST00000555737 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
RCCD1-204ENST00000555737 DAXXQ9UER7 740 aaPredicted RBP23.5■■□□□ 1.35
RCCD1-204ENST00000555737 TCERG1O14776 1098 aaKnown RBP23.49■■□□□ 1.35
RCCD1-204ENST00000555737 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
RCCD1-204ENST00000555737 RALBP1Q15311 655 aa23.48■■□□□ 1.35
RCCD1-204ENST00000555737 NLRP13Q86W25 1043 aa23.48■■□□□ 1.35
RCCD1-204ENST00000555737 ANKRD50Q9ULJ7 1429 aa23.47■■□□□ 1.35
RCCD1-204ENST00000555737 RGS3P49796 1198 aa23.47■■□□□ 1.35
RCCD1-204ENST00000555737 PLEKHD1A6NEE1 506 aa23.46■■□□□ 1.35
RCCD1-204ENST00000555737 BACH2Q9BYV9 841 aa23.46■■□□□ 1.35
RCCD1-204ENST00000555737 WDR62O43379 1518 aa23.45■■□□□ 1.34
RCCD1-204ENST00000555737 PANK3Q9H999 370 aa23.45■■□□□ 1.34
RCCD1-204ENST00000555737 KTN1Q86UP2 1357 aaKnown RBP23.44■■□□□ 1.34
RCCD1-204ENST00000555737 CAMSAP2Q08AD1 1489 aa23.44■■□□□ 1.34
RCCD1-204ENST00000555737 NUP153P49790 1475 aaKnown RBP23.43■■□□□ 1.34
RCCD1-204ENST00000555737 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
RCCD1-204ENST00000555737 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
RCCD1-204ENST00000555737 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms