RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 MAGI2Q86UL8 1455 aa31.35■■■□□ 2.61
CBLN3-202ENST00000555436 ARHGAP5Q13017 1502 aa31.34■■■□□ 2.61
CBLN3-202ENST00000555436 CEP162Q5TB80 1403 aa31.33■■■□□ 2.61
CBLN3-202ENST00000555436 ARID4BQ4LE39 1312 aaPredicted RBP31.33■■■□□ 2.61
CBLN3-202ENST00000555436 ZFYVE16Q7Z3T8 1539 aa31.31■■■□□ 2.6
CBLN3-202ENST00000555436 YEATS2Q9ULM3 1422 aa31.31■■■□□ 2.6
CBLN3-202ENST00000555436 ADAMTSL3P82987 1691 aa31.27■■■□□ 2.6
CBLN3-202ENST00000555436 ZNF518AQ6AHZ1 1483 aa31.24■■■□□ 2.59
CBLN3-202ENST00000555436 PREX2Q70Z35 1606 aa31.24■■■□□ 2.59
CBLN3-202ENST00000555436 BCORL1Q5H9F3 1711 aa31.23■■■□□ 2.59
CBLN3-202ENST00000555436 CDC42BPBQ9Y5S2 1711 aa31.22■■■□□ 2.59
CBLN3-202ENST00000555436 AFAP1Q8N556 730 aa31.21■■■□□ 2.59
CBLN3-202ENST00000555436 PTPRMP28827 1452 aa31.21■■■□□ 2.59
CBLN3-202ENST00000555436 LOC105371045A0A1W2PR82 267 aa31.19■■■□□ 2.58
CBLN3-202ENST00000555436 KDM5CP41229 1560 aa31.17■■■□□ 2.58
CBLN3-202ENST00000555436 ATP10AO60312 1499 aa31.17■■■□□ 2.58
CBLN3-202ENST00000555436 MTUS2Q5JR59 1369 aa31.17■■■□□ 2.58
CBLN3-202ENST00000555436 ABCC1P33527 1531 aa31.15■■■□□ 2.58
CBLN3-202ENST00000555436 GPATCH8Q9UKJ3 1502 aaKnown RBP31.14■■■□□ 2.58
CBLN3-202ENST00000555436 MADDQ8WXG6 1647 aa31.14■■■□□ 2.58
CBLN3-202ENST00000555436 ARHGEF12Q9NZN5 1544 aa31.14■■■□□ 2.57
CBLN3-202ENST00000555436 HECW2Q9P2P5 1572 aa31.13■■■□□ 2.57
CBLN3-202ENST00000555436 CDC42BPAQ5VT25 1732 aa31.13■■■□□ 2.57
CBLN3-202ENST00000555436 C9orf84Q5VXU9 1444 aa31.13■■■□□ 2.57
CBLN3-202ENST00000555436 TRAPPC8Q9Y2L5 1435 aa31.12■■■□□ 2.57
CBLN3-202ENST00000555436 SIGLEC1Q9BZZ2 1709 aa31.12■■■□□ 2.57
CBLN3-202ENST00000555436 MLH3Q9UHC1 1453 aa31.08■■■□□ 2.57
CBLN3-202ENST00000555436 CCNB3Q8WWL7 1395 aa31.08■■■□□ 2.57
CBLN3-202ENST00000555436 ZNF777Q9ULD5 760 aaPredicted RBP31.08■■■□□ 2.57
CBLN3-202ENST00000555436 MYT1LQ9UL68 1186 aa31.07■■■□□ 2.56
CBLN3-202ENST00000555436 CFDP1Q9UEE9 299 aaPredicted RBP31.05■■■□□ 2.56
CBLN3-202ENST00000555436 EHBP1L1Q8N3D4 1523 aa31.04■■■□□ 2.56
CBLN3-202ENST00000555436 ITSN2Q9NZM3 1697 aa31.04■■■□□ 2.56
CBLN3-202ENST00000555436 MLECQ14165 292 aa31.04■■■□□ 2.56
CBLN3-202ENST00000555436 SAMD9LQ8IVG5 1584 aa31.03■■■□□ 2.56
CBLN3-202ENST00000555436 DIP2CQ9Y2E4 1556 aa31.01■■■□□ 2.56
CBLN3-202ENST00000555436 RIMS1Q86UR5 1692 aaKnown RBP31.01■■■□□ 2.55
CBLN3-202ENST00000555436 VPS8Q8N3P4 1428 aa30.99■■■□□ 2.55
CBLN3-202ENST00000555436 KIAA1107Q9UPP5 1409 aa30.99■■■□□ 2.55
CBLN3-202ENST00000555436 PLEKHH2Q8IVE3 1493 aa30.98■■■□□ 2.55
CBLN3-202ENST00000555436 SYCP2Q9BX26 1530 aa30.98■■■□□ 2.55
CBLN3-202ENST00000555436 REREQ9P2R6 1566 aa30.97■■■□□ 2.55
CBLN3-202ENST00000555436 HNRNPMP52272 730 aaKnown RBP eCLIP30.97■■■□□ 2.55
CBLN3-202ENST00000555436 ABCA6Q8N139 1617 aa30.96■■■□□ 2.55
CBLN3-202ENST00000555436 TIAM1Q13009 1591 aa30.95■■■□□ 2.54
CBLN3-202ENST00000555436 SPAG9O60271 1321 aaKnown RBP30.92■■■□□ 2.54
CBLN3-202ENST00000555436 KIDINS220Q9ULH0 1771 aa30.91■■■□□ 2.54
CBLN3-202ENST00000555436 AGLP35573 1532 aa30.89■■■□□ 2.54
CBLN3-202ENST00000555436 FER1L4A9Z1Z3 1794 aa30.89■■■□□ 2.54
CBLN3-202ENST00000555436 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
CBLN3-202ENST00000555436 NCOA2Q15596 1464 aa30.88■■■□□ 2.53
CBLN3-202ENST00000555436 ZNF644Q9H582 1327 aaPredicted RBP30.87■■■□□ 2.53
CBLN3-202ENST00000555436 LMTK3Q96Q04 1460 aa30.85■■■□□ 2.53
CBLN3-202ENST00000555436 SUPT6HQ7KZ85 1726 aaKnown RBP30.83■■■□□ 2.53
CBLN3-202ENST00000555436 LRRC9Q6ZRR7 1453 aa30.82■■■□□ 2.52
CBLN3-202ENST00000555436 MBD5Q9P267 1494 aa30.82■■■□□ 2.52
CBLN3-202ENST00000555436 ATP7AQ04656 1500 aa30.81■■■□□ 2.52
CBLN3-202ENST00000555436 MAP3K1Q13233 1512 aa30.79■■■□□ 2.52
CBLN3-202ENST00000555436 INO80Q9ULG1 1556 aaPredicted RBP30.79■■■□□ 2.52
CBLN3-202ENST00000555436 CEBPAP49715 358 aaPredicted RBP30.76■■■□□ 2.51
CBLN3-202ENST00000555436 KANK4Q5T7N3 995 aaPredicted RBP30.73■■■□□ 2.51
CBLN3-202ENST00000555436 ESF1Q9H501 851 aaKnown RBP30.73■■■□□ 2.51
CBLN3-202ENST00000555436 A2MP01023 1474 aa30.72■■■□□ 2.51
CBLN3-202ENST00000555436 CAMSAP2Q08AD1 1489 aa30.71■■■□□ 2.51
CBLN3-202ENST00000555436 RTEL1-TNFRSF6BF6WH68 1400 aa30.71■■■□□ 2.51
CBLN3-202ENST00000555436 HSPA2P54652 639 aa30.69■■■□□ 2.5
CBLN3-202ENST00000555436 RSPH4AQ5TD94 716 aa30.69■■■□□ 2.5
CBLN3-202ENST00000555436 PLXNC1O60486 1568 aa30.69■■■□□ 2.5
CBLN3-202ENST00000555436 CNTLNQ9NXG0 1405 aa30.68■■■□□ 2.5
CBLN3-202ENST00000555436 CCDC141Q6ZP82 1450 aa30.68■■■□□ 2.5
CBLN3-202ENST00000555436 APLP2Q06481 763 aa30.61■■■□□ 2.49
CBLN3-202ENST00000555436 ADGBQ8N7X0 1667 aa30.61■■■□□ 2.49
CBLN3-202ENST00000555436 PREX1Q8TCU6 1659 aa30.59■■■□□ 2.49
CBLN3-202ENST00000555436 C3P01024 1663 aa30.58■■■□□ 2.49
CBLN3-202ENST00000555436 ARHGEF5Q12774 1597 aa30.58■■■□□ 2.49
CBLN3-202ENST00000555436 MYOM3Q5VTT5 1437 aa30.58■■■□□ 2.49
CBLN3-202ENST00000555436 DHX29Q7Z478 1369 aaKnown RBP30.58■■■□□ 2.49
CBLN3-202ENST00000555436 UHRF1BP1Q6BDS2 1440 aa30.57■■■□□ 2.48
CBLN3-202ENST00000555436 MIA2Q96PC5 1412 aa30.57■■■□□ 2.48
CBLN3-202ENST00000555436 GGT6Q6P531 493 aa30.56■■■□□ 2.48
CBLN3-202ENST00000555436 TSPY4P0CV99 314 aa30.55■■■□□ 2.48
CBLN3-202ENST00000555436 TSPY10P0CW01 314 aa30.55■■■□□ 2.48
CBLN3-202ENST00000555436 PPP6R1Q9UPN7 881 aa30.55■■■□□ 2.48
CBLN3-202ENST00000555436 ZMYM3Q14202 1370 aa30.54■■■□□ 2.48
CBLN3-202ENST00000555436 SETD1BQ9UPS6 1966 aaKnown RBP30.53■■■□□ 2.48
CBLN3-202ENST00000555436 ILDR1Q86SU0 546 aaPredicted RBP30.52■■■□□ 2.48
CBLN3-202ENST00000555436 MROH2AA6NES4 1674 aa30.52■■■□□ 2.48
CBLN3-202ENST00000555436 NPATQ14207 1427 aa30.5■■■□□ 2.47
CBLN3-202ENST00000555436 KIF3BO15066 747 aa30.46■■■□□ 2.47
CBLN3-202ENST00000555436 CLTCQ00610 1675 aaKnown RBP30.45■■■□□ 2.46
CBLN3-202ENST00000555436 MAST1Q9Y2H9 1570 aa30.43■■■□□ 2.46
CBLN3-202ENST00000555436 PTPRKQ15262 1439 aa30.39■■■□□ 2.46
CBLN3-202ENST00000555436 DMRT2Q9Y5R5 561 aa30.36■■■□□ 2.45
CBLN3-202ENST00000555436 FAM135AQ9P2D6 1515 aa30.36■■■□□ 2.45
CBLN3-202ENST00000555436 FGD6Q6ZV73 1430 aa30.35■■■□□ 2.45
CBLN3-202ENST00000555436 PTPN23Q9H3S7 1636 aa30.33■■■□□ 2.45
CBLN3-202ENST00000555436 KDM5DQ9BY66 1539 aa30.32■■■□□ 2.44
CBLN3-202ENST00000555436 ABCC5O15440 1437 aa30.32■■■□□ 2.44
CBLN3-202ENST00000555436 WASHC2CQ9Y4E1 1318 aa30.32■■■□□ 2.44
CBLN3-202ENST00000555436 STRCQ7RTU9 1775 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms